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Iron in PDB 6dhz: Crystallographic Octamer of A Metal-Free RIDC1 Variant Bearing Two Disulfide Bonded Cysteines
Protein crystallography data
The structure of Crystallographic Octamer of A Metal-Free RIDC1 Variant Bearing Two Disulfide Bonded Cysteines, PDB code: 6dhz
was solved by
F.A.Tezcan,
L.A.Churchfield,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 78.55 / 2.80 |
| Space group | P 41 2 2 |
| Cell size a, b, c (Å), α, β, γ (°) | 78.550, 78.550, 168.330, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 20.8 / 27.7 |
Other elements in 6dhz:
The structure of Crystallographic Octamer of A Metal-Free RIDC1 Variant Bearing Two Disulfide Bonded Cysteines also contains other interesting chemical elements:
| Calcium | (Ca) | 7 atoms |
Iron Binding Sites:
The binding sites of Iron atom in the Crystallographic Octamer of A Metal-Free RIDC1 Variant Bearing Two Disulfide Bonded Cysteines
(pdb code 6dhz). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Crystallographic Octamer of A Metal-Free RIDC1 Variant Bearing Two Disulfide Bonded Cysteines, PDB code: 6dhz:
Jump to Iron binding site number: 1; 2; 3; 4;
In total 4 binding sites of Iron where determined in the Crystallographic Octamer of A Metal-Free RIDC1 Variant Bearing Two Disulfide Bonded Cysteines, PDB code: 6dhz:
Jump to Iron binding site number: 1; 2; 3; 4;
Iron binding site 1 out of 4 in 6dhz
Go back to
Iron Binding Sites List in 6dhz
Iron binding site 1 out
of 4 in the Crystallographic Octamer of A Metal-Free RIDC1 Variant Bearing Two Disulfide Bonded Cysteines
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Crystallographic Octamer of A Metal-Free RIDC1 Variant Bearing Two Disulfide Bonded Cysteines within 5.0Å range:
|
Iron binding site 2 out of 4 in 6dhz
Go back to
Iron Binding Sites List in 6dhz
Iron binding site 2 out
of 4 in the Crystallographic Octamer of A Metal-Free RIDC1 Variant Bearing Two Disulfide Bonded Cysteines
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Crystallographic Octamer of A Metal-Free RIDC1 Variant Bearing Two Disulfide Bonded Cysteines within 5.0Å range:
|
Iron binding site 3 out of 4 in 6dhz
Go back to
Iron Binding Sites List in 6dhz
Iron binding site 3 out
of 4 in the Crystallographic Octamer of A Metal-Free RIDC1 Variant Bearing Two Disulfide Bonded Cysteines
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Crystallographic Octamer of A Metal-Free RIDC1 Variant Bearing Two Disulfide Bonded Cysteines within 5.0Å range:
|
Iron binding site 4 out of 4 in 6dhz
Go back to
Iron Binding Sites List in 6dhz
Iron binding site 4 out
of 4 in the Crystallographic Octamer of A Metal-Free RIDC1 Variant Bearing Two Disulfide Bonded Cysteines
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Crystallographic Octamer of A Metal-Free RIDC1 Variant Bearing Two Disulfide Bonded Cysteines within 5.0Å range:
|
Reference:
L.A.Churchfield,
R.G.Alberstein,
L.M.Williamson,
F.A.Tezcan.
Determining the Structural and Energetic Basis of Allostery in A De Novo Designed Metalloprotein Assembly. J. Am. Chem. Soc. V. 140 10043 2018.
ISSN: ESSN 1520-5126
PubMed: 29996654
DOI: 10.1021/JACS.8B05812
Page generated: Sun Dec 13 16:24:19 2020
ISSN: ESSN 1520-5126
PubMed: 29996654
DOI: 10.1021/JACS.8B05812
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