Iron in PDB 6qwj: The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821

Enzymatic activity of The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821

All present enzymatic activity of The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821:
1.97.1.12;

Other elements in 6qwj:

The structure of The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821 also contains other interesting chemical elements:

Magnesium (Mg) 362 atoms

Iron Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 40; Page 5, Binding sites: 41 - 48;

Binding sites:

The binding sites of Iron atom in the The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821 (pdb code 6qwj). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 48 binding sites of Iron where determined in the The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821, PDB code: 6qwj:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iron binding site 1 out of 48 in 6qwj

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Iron binding site 1 out of 48 in the The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe804

b:0.5
occ:1.00
 FE1 B:SF4804 0.0 0.5 1.0
S2 B:SF4804 2.3 0.5 1.0
S3 B:SF4804 2.3 0.5 1.0
S4 B:SF4804 2.3 0.5 1.0
FE4 B:SF4804 2.7 0.5 1.0
FE3 B:SF4804 2.7 0.5 1.0
FE2 B:SF4804 2.7 0.5 1.0
SG A:CYS575 3.0 0.3 1.0
CB A:CYS575 3.3 0.3 1.0
S1 B:SF4804 3.9 0.5 1.0
N A:GLY577 4.2 0.6 1.0
CA B:GLY564 4.3 0.3 1.0
CA A:GLY577 4.4 0.6 1.0
CD B:PRO565 4.5 0.5 1.0
CA A:CYS575 4.7 0.3 1.0
CB A:CYS584 4.9 0.9 1.0
N A:ASP576 4.9 0.4 1.0
N B:PRO565 4.9 0.5 1.0

Iron binding site 2 out of 48 in 6qwj

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Iron binding site 2 out of 48 in the The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe804

b:0.5
occ:1.00
 FE2 B:SF4804 0.0 0.5 1.0
S3 B:SF4804 2.3 0.5 1.0
S4 B:SF4804 2.3 0.5 1.0
S1 B:SF4804 2.3 0.5 1.0
FE1 B:SF4804 2.7 0.5 1.0
FE4 B:SF4804 2.7 0.5 1.0
FE3 B:SF4804 2.7 0.5 1.0
S2 B:SF4804 3.9 0.5 1.0
CB A:CYS584 4.2 0.9 1.0
SG A:CYS575 4.3 0.3 1.0
SG A:CYS584 4.4 0.9 1.0
SG B:CYS571 4.7 0.6 1.0
CB B:CYS562 4.8 0.1 1.0
CB A:CYS575 5.0 0.3 1.0

Iron binding site 3 out of 48 in 6qwj

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Iron binding site 3 out of 48 in the The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe804

b:0.5
occ:1.00
 FE3 B:SF4804 0.0 0.5 1.0
S4 B:SF4804 2.3 0.5 1.0
S2 B:SF4804 2.3 0.5 1.0
S1 B:SF4804 2.3 0.5 1.0
FE1 B:SF4804 2.7 0.5 1.0
FE4 B:SF4804 2.7 0.5 1.0
FE2 B:SF4804 2.7 0.5 1.0
O B:CYS562 3.2 0.1 1.0
CB B:CYS562 3.4 0.1 1.0
C B:CYS562 3.5 0.1 1.0
S3 B:SF4804 3.9 0.5 1.0
N B:GLY564 3.9 0.3 1.0
CA B:GLY564 4.0 0.3 1.0
CA B:CYS562 4.0 0.1 1.0
C B:ASP563 4.1 0.7 1.0
N B:ASP563 4.2 0.7 1.0
O B:ASP563 4.3 0.7 1.0
OG1 B:THR570 4.5 0.3 1.0
O B:THR570 4.7 0.3 1.0
CA B:ASP563 4.8 0.7 1.0
SG B:CYS562 4.9 0.1 1.0
CA B:CYS571 4.9 0.6 1.0
C B:THR570 4.9 0.3 1.0

Iron binding site 4 out of 48 in 6qwj

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Iron binding site 4 out of 48 in the The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe804

b:0.5
occ:1.00
 FE4 B:SF4804 0.0 0.5 1.0
S3 B:SF4804 2.3 0.5 1.0
S2 B:SF4804 2.3 0.5 1.0
S1 B:SF4804 2.3 0.5 1.0
FE1 B:SF4804 2.7 0.5 1.0
FE2 B:SF4804 2.7 0.5 1.0
FE3 B:SF4804 2.7 0.5 1.0
CB B:CYS571 3.3 0.6 1.0
SG B:CYS571 3.3 0.6 1.0
CA B:CYS571 3.5 0.6 1.0
S4 B:SF4804 3.9 0.5 1.0
N B:CYS571 3.9 0.6 1.0
C B:THR570 4.5 0.3 1.0
O B:THR570 4.8 0.3 1.0
N B:THR570 4.9 0.3 1.0
O B:CYS562 4.9 0.1 1.0
C B:CYS571 5.0 0.6 1.0

Iron binding site 5 out of 48 in 6qwj

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Iron binding site 5 out of 48 in the The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe101

b:0.8
occ:1.00
 FE1 C:SF4101 0.0 0.8 1.0
S4 C:SF4101 2.3 0.8 1.0
S2 C:SF4101 2.3 0.8 1.0
S3 C:SF4101 2.3 0.8 1.0
FE4 C:SF4101 2.7 0.8 1.0
FE2 C:SF4101 2.7 0.8 1.0
FE3 C:SF4101 2.7 0.8 1.0
SG C:CYS50 2.9 0.6 1.0
CG2 C:VAL48 3.0 0.8 1.0
CD C:PRO21 3.3 0.6 1.0
N C:LYS51 3.6 0.1 1.0
CG C:PRO21 3.7 0.6 1.0
S1 C:SF4101 3.9 0.8 1.0
N C:CYS50 3.9 0.6 1.0
CB C:CYS50 4.0 0.6 1.0
C C:CYS50 4.2 0.6 1.0
CA C:CYS50 4.3 0.6 1.0
N C:ARG52 4.4 0.4 1.0
CA C:LYS51 4.4 0.1 1.0
CB C:VAL48 4.4 0.8 1.0
OG1 C:THR22 4.4 0.5 1.0
N C:VAL48 4.5 0.8 1.0
N C:GLY49 4.5 0.6 1.0
N C:PRO21 4.6 0.6 1.0
CA C:VAL48 4.8 0.8 1.0
CA C:CYS20 4.9 0.4 1.0
C C:GLY49 4.9 0.6 1.0
C C:VAL48 4.9 0.8 1.0
C C:LYS51 4.9 0.1 1.0

Iron binding site 6 out of 48 in 6qwj

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Iron binding site 6 out of 48 in the The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe101

b:0.8
occ:1.00
 FE2 C:SF4101 0.0 0.8 1.0
S3 C:SF4101 2.3 0.8 1.0
S4 C:SF4101 2.3 0.8 1.0
S1 C:SF4101 2.3 0.8 1.0
FE1 C:SF4101 2.7 0.8 1.0
FE3 C:SF4101 2.7 0.8 1.0
FE4 C:SF4101 2.7 0.8 1.0
SG C:CYS20 3.2 0.4 1.0
CB C:CYS20 3.2 0.4 1.0
SG C:CYS53 3.4 0.9 1.0
CA C:CYS20 3.4 0.4 1.0
CD1 C:LEU25 3.8 0.7 1.0
S2 C:SF4101 3.9 0.8 1.0
CD C:PRO21 3.9 0.6 1.0
C C:CYS20 4.3 0.4 1.0
N C:PRO21 4.4 0.6 1.0
N C:CYS20 4.5 0.4 1.0
CG2 C:VAL24 4.8 1.0 1.0
CB C:VAL24 4.8 1.0 1.0
OG1 C:THR22 5.0 0.5 1.0

Iron binding site 7 out of 48 in 6qwj

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Iron binding site 7 out of 48 in the The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe101

b:0.8
occ:1.00
 FE3 C:SF4101 0.0 0.8 1.0
S2 C:SF4101 2.3 0.8 1.0
S4 C:SF4101 2.3 0.8 1.0
S1 C:SF4101 2.3 0.8 1.0
FE1 C:SF4101 2.7 0.8 1.0
FE2 C:SF4101 2.7 0.8 1.0
FE4 C:SF4101 2.7 0.8 1.0
CA C:LYS51 3.1 0.1 1.0
N C:LYS51 3.2 0.1 1.0
SG C:CYS53 3.6 0.9 1.0
N C:ARG52 3.8 0.4 1.0
C C:LYS51 3.8 0.1 1.0
S3 C:SF4101 3.9 0.8 1.0
CB C:LYS51 4.2 0.1 1.0
N C:CYS53 4.4 0.9 1.0
C C:CYS50 4.5 0.6 1.0
CB C:CYS53 4.6 0.9 1.0
SG C:CYS50 4.7 0.6 1.0
OE1 C:GLU54 4.8 0.2 1.0
N C:CYS50 4.9 0.6 1.0
O C:LYS51 4.9 0.1 1.0
CG1 C:VAL66 4.9 0.2 1.0
CA C:ARG52 5.0 0.4 1.0

Iron binding site 8 out of 48 in 6qwj

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Iron binding site 8 out of 48 in the The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe101

b:0.8
occ:1.00
 FE4 C:SF4101 0.0 0.8 1.0
S2 C:SF4101 2.3 0.8 1.0
S3 C:SF4101 2.3 0.8 1.0
S1 C:SF4101 2.3 0.8 1.0
FE1 C:SF4101 2.7 0.8 1.0
FE3 C:SF4101 2.7 0.8 1.0
FE2 C:SF4101 2.7 0.8 1.0
SG C:CYS47 3.0 0.3 1.0
N C:VAL48 3.6 0.8 1.0
CA C:CYS47 3.7 0.3 1.0
CB C:CYS47 3.9 0.3 1.0
S4 C:SF4101 3.9 0.8 1.0
C C:CYS47 4.2 0.3 1.0
CG2 C:VAL48 4.2 0.8 1.0
N C:GLY49 4.3 0.6 1.0
CG2 C:VAL24 4.6 1.0 1.0
CA C:VAL48 4.6 0.8 1.0
OG1 C:THR22 4.8 0.5 1.0
N C:CYS47 4.9 0.3 1.0
CB C:VAL48 4.9 0.8 1.0
CB C:VAL24 4.9 1.0 1.0
C C:VAL48 4.9 0.8 1.0

Iron binding site 9 out of 48 in 6qwj

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Iron binding site 9 out of 48 in the The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 9 of The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe102

b:0.5
occ:1.00
 FE1 C:SF4102 0.0 0.5 1.0
S2 C:SF4102 2.3 0.5 1.0
S4 C:SF4102 2.3 0.5 1.0
S3 C:SF4102 2.3 0.5 1.0
FE3 C:SF4102 2.7 0.5 1.0
FE4 C:SF4102 2.7 0.5 1.0
FE2 C:SF4102 2.7 0.5 1.0
SG C:CYS16 3.0 0.3 1.0
SG C:CYS57 3.0 0.9 1.0
CB C:CYS16 3.3 0.3 1.0
OG C:SER63 3.5 0.0 1.0
S1 C:SF4102 3.9 0.5 1.0
CB C:CYS57 4.0 0.9 1.0
CA C:CYS57 4.1 0.9 1.0
N C:CYS16 4.1 0.3 1.0
CD C:PRO58 4.3 0.2 1.0
CA C:CYS16 4.3 0.3 1.0
CB C:SER63 4.6 0.0 1.0
OG1 C:THR59 4.8 0.2 1.0

Iron binding site 10 out of 48 in 6qwj

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Iron binding site 10 out of 48 in the The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 10 of The Structure of Tetrameric Cyanobacterial Photosystem I of Chroococcidiopsis Sp. Ts-821 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe102

b:0.5
occ:1.00
 FE2 C:SF4102 0.0 0.5 1.0
S1 C:SF4102 2.3 0.5 1.0
S4 C:SF4102 2.3 0.5 1.0
S3 C:SF4102 2.3 0.5 1.0
FE4 C:SF4102 2.7 0.5 1.0
FE1 C:SF4102 2.7 0.5 1.0
FE3 C:SF4102 2.7 0.5 1.0
N C:THR14 2.9 0.7 1.0
CA C:THR14 3.2 0.7 1.0
SG C:CYS10 3.8 0.1 1.0
S2 C:SF4102 3.9 0.5 1.0
SG C:CYS16 3.9 0.3 1.0
C C:THR14 3.9 0.7 1.0
N C:CYS13 4.0 1.0 1.0
C C:CYS13 4.0 1.0 1.0
N C:GLN15 4.1 0.8 1.0
CE C:MET27 4.4 0.4 1.0
SG C:CYS13 4.4 1.0 1.0
C C:GLY12 4.4 0.3 1.0
N C:GLY12 4.4 0.3 1.0
CA C:GLY12 4.5 0.3 1.0
CB C:THR14 4.5 0.7 1.0
N C:CYS16 4.5 0.3 1.0
CA C:CYS13 4.5 1.0 1.0
SD C:MET27 4.6 0.4 1.0
CG2 C:THR14 4.7 0.7 1.0
CG1 C:VAL17 4.7 0.9 1.0
CB C:CYS16 4.8 0.3 1.0
O C:THR14 4.9 0.7 1.0
CB C:CYS10 4.9 0.1 1.0
CB C:ALA39 5.0 0.7 1.0
O C:CYS13 5.0 1.0 1.0

Reference:

D.A.Semchonok, E.J.Boekema, B.D.Bruce, E.Ramirez-Aportela, C.O.S.Sorzano, A.Guskov. The Structure of Tetrameric Photosystem I To Be Published.
Page generated: Sun Dec 13 16:58:16 2020

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