Iron in PDB 6u8y: Structure of An Archaea Respiratory Membrane Complex

Enzymatic activity of Structure of An Archaea Respiratory Membrane Complex

All present enzymatic activity of Structure of An Archaea Respiratory Membrane Complex:
1.6.99.5;

Iron Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 24;

Binding sites:

The binding sites of Iron atom in the Structure of An Archaea Respiratory Membrane Complex (pdb code 6u8y). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 24 binding sites of Iron where determined in the Structure of An Archaea Respiratory Membrane Complex, PDB code: 6u8y:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iron binding site 1 out of 24 in 6u8y

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Iron binding site 1 out of 24 in the Structure of An Archaea Respiratory Membrane Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of An Archaea Respiratory Membrane Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Fe201

b:48.8
occ:1.00
 FE1 J:SF4201 0.0 48.8 1.0
S4 J:SF4201 2.3 48.8 1.0
SG J:CYS93 2.3 28.9 1.0
S3 J:SF4201 2.3 48.8 1.0
S2 J:SF4201 2.3 48.8 1.0
FE3 J:SF4201 2.7 48.8 1.0
FE2 J:SF4201 2.7 48.8 1.0
FE4 J:SF4201 2.7 48.8 1.0
CB J:CYS93 3.3 28.9 1.0
S1 J:SF4201 3.9 48.8 1.0
CA J:CYS93 3.9 28.9 1.0
N J:CYS93 3.9 28.9 1.0
N J:TYR65 4.5 27.9 1.0
CA J:GLY64 4.6 23.9 1.0
CA J:GLY98 4.7 32.1 1.0
C J:SER92 4.8 24.4 1.0
CE2 J:TYR100 4.8 48.8 1.0
N J:SER92 4.8 24.4 1.0
C J:GLY64 4.9 23.9 1.0
CD2 J:TYR100 4.9 48.8 1.0
CD1 J:TYR65 5.0 27.9 1.0

Iron binding site 2 out of 24 in 6u8y

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Iron binding site 2 out of 24 in the Structure of An Archaea Respiratory Membrane Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure of An Archaea Respiratory Membrane Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Fe201

b:48.8
occ:1.00
 FE2 J:SF4201 0.0 48.8 1.0
S1 J:SF4201 2.3 48.8 1.0
S4 J:SF4201 2.3 48.8 1.0
S3 J:SF4201 2.3 48.8 1.0
SG J:CYS123 2.4 18.9 1.0
FE3 J:SF4201 2.7 48.8 1.0
FE1 J:SF4201 2.7 48.8 1.0
FE4 J:SF4201 2.7 48.8 1.0
CB J:CYS123 3.4 18.9 1.0
S2 J:SF4201 3.8 48.8 1.0
CA J:CYS123 4.0 18.9 1.0
NH1 L:ARG83 4.4 28.1 1.0
NE L:ARG83 4.7 28.1 1.0
O J:GLY122 4.7 31.0 1.0
N J:SER92 4.7 24.4 1.0
CZ L:ARG83 4.9 28.1 1.0
C J:CYS123 4.9 18.9 1.0
SG J:CYS93 4.9 28.9 1.0

Iron binding site 3 out of 24 in 6u8y

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Iron binding site 3 out of 24 in the Structure of An Archaea Respiratory Membrane Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Structure of An Archaea Respiratory Membrane Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Fe201

b:48.8
occ:1.00
 FE3 J:SF4201 0.0 48.8 1.0
S1 J:SF4201 2.3 48.8 1.0
S4 J:SF4201 2.3 48.8 1.0
S2 J:SF4201 2.3 48.8 1.0
FE2 J:SF4201 2.7 48.8 1.0
FE1 J:SF4201 2.7 48.8 1.0
FE4 J:SF4201 2.7 48.8 1.0
SG J:CYS28 3.1 42.2 1.0
S3 J:SF4201 3.9 48.8 1.0
CG L:ARG83 4.0 28.1 1.0
NE L:ARG83 4.1 28.1 1.0
CB J:CYS28 4.3 42.2 1.0
SG J:CYS123 4.3 18.9 1.0
CE2 J:TYR100 4.5 48.8 1.0
CD L:ARG83 4.5 28.1 1.0
SG J:CYS93 4.6 28.9 1.0
O J:CYS28 4.8 42.2 1.0
CZ L:ARG83 4.9 28.1 1.0
CB L:ARG83 5.0 28.1 1.0
OH J:TYR100 5.0 48.8 1.0
CD1 J:TYR65 5.0 27.9 1.0

Iron binding site 4 out of 24 in 6u8y

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Iron binding site 4 out of 24 in the Structure of An Archaea Respiratory Membrane Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Structure of An Archaea Respiratory Membrane Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Fe201

b:48.8
occ:1.00
 FE4 J:SF4201 0.0 48.8 1.0
S2 J:SF4201 2.3 48.8 1.0
S1 J:SF4201 2.3 48.8 1.0
S3 J:SF4201 2.3 48.8 1.0
FE2 J:SF4201 2.7 48.8 1.0
FE3 J:SF4201 2.7 48.8 1.0
FE1 J:SF4201 2.7 48.8 1.0
SD J:MET124 3.8 31.1 1.0
S4 J:SF4201 3.9 48.8 1.0
CA J:GLY64 4.0 23.9 1.0
SG J:CYS28 4.3 42.2 1.0
O J:CYS28 4.3 42.2 1.0
CA J:GLY91 4.4 20.8 1.0
SG J:CYS93 4.5 28.9 1.0
N J:SER92 4.7 24.4 1.0
SG J:CYS123 4.7 18.9 1.0
CG J:MET124 4.8 31.1 1.0
N J:GLY64 4.9 23.9 1.0
CB J:CYS93 4.9 28.9 1.0

Iron binding site 5 out of 24 in 6u8y

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Iron binding site 5 out of 24 in the Structure of An Archaea Respiratory Membrane Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Structure of An Archaea Respiratory Membrane Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
N:Fe301

b:48.8
occ:1.00
 FE1 N:SF4301 0.0 48.8 1.0
S2 N:SF4301 2.3 48.8 1.0
S3 N:SF4301 2.3 48.8 1.0
S4 N:SF4301 2.3 48.8 1.0
FE3 N:SF4301 2.7 48.8 1.0
FE4 N:SF4301 2.7 48.8 1.0
FE2 N:SF4301 2.7 48.8 1.0
SG N:CYS102 2.9 48.8 1.0
CB N:CYS102 3.3 48.8 1.0
S1 N:SF4301 3.8 48.8 1.0
NE2 N:HIS54 4.0 48.8 1.0
N N:CYS102 4.0 48.8 1.0
CE1 N:HIS54 4.2 48.8 1.0
CA N:CYS102 4.3 48.8 1.0
CD1 N:ILE76 4.4 48.8 1.0
N N:PHE101 4.9 48.8 1.0
N N:GLN100 5.0 48.8 1.0
CD2 N:HIS54 5.0 48.8 1.0

Iron binding site 6 out of 24 in 6u8y

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Iron binding site 6 out of 24 in the Structure of An Archaea Respiratory Membrane Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Structure of An Archaea Respiratory Membrane Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
N:Fe301

b:48.8
occ:1.00
 FE2 N:SF4301 0.0 48.8 1.0
S1 N:SF4301 2.3 48.8 1.0
S4 N:SF4301 2.3 48.8 1.0
S3 N:SF4301 2.3 48.8 1.0
FE3 N:SF4301 2.7 48.8 1.0
FE1 N:SF4301 2.7 48.8 1.0
FE4 N:SF4301 2.7 48.8 1.0
SG N:CYS99 3.0 48.8 1.0
N N:CYS99 3.2 48.8 1.0
N N:GLN100 3.3 48.8 1.0
S2 N:SF4301 3.9 48.8 1.0
CA N:CYS99 3.9 48.8 1.0
C N:CYS99 4.0 48.8 1.0
CB N:CYS99 4.0 48.8 1.0
C N:PHE98 4.1 48.8 1.0
CA N:GLN100 4.1 48.8 1.0
N N:PHE101 4.1 48.8 1.0
N N:PHE98 4.2 48.8 1.0
CA N:PHE98 4.2 48.8 1.0
OE1 N:GLN100 4.4 48.8 1.0
SG N:CYS96 4.6 48.8 1.0
CD N:PRO72 4.7 31.9 1.0
C N:GLN100 4.7 48.8 1.0
CG2 N:THR97 4.7 48.8 1.0
N N:CYS102 4.8 48.8 1.0
N N:THR97 4.9 48.8 1.0
SG N:CYS102 4.9 48.8 1.0
C N:THR97 4.9 48.8 1.0
CD N:GLN100 5.0 48.8 1.0

Iron binding site 7 out of 24 in 6u8y

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Iron binding site 7 out of 24 in the Structure of An Archaea Respiratory Membrane Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of Structure of An Archaea Respiratory Membrane Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
N:Fe301

b:48.8
occ:1.00
 FE3 N:SF4301 0.0 48.8 1.0
S4 N:SF4301 2.3 48.8 1.0
S1 N:SF4301 2.3 48.8 1.0
S2 N:SF4301 2.3 48.8 1.0
FE1 N:SF4301 2.7 48.8 1.0
FE2 N:SF4301 2.7 48.8 1.0
FE4 N:SF4301 2.7 48.8 1.0
SG N:CYS71 3.1 25.5 1.0
CD N:PRO72 3.3 31.9 1.0
CB N:CYS71 3.3 25.5 1.0
CA N:CYS71 3.3 25.5 1.0
SG N:CYS102 3.6 48.8 1.0
S3 N:SF4301 3.8 48.8 1.0
N N:PRO72 4.0 31.9 1.0
C N:CYS71 4.1 25.5 1.0
SG N:CYS99 4.2 48.8 1.0
CG N:PRO72 4.4 31.9 1.0
N N:CYS71 4.5 25.5 1.0
O N:ILE70 4.9 48.8 1.0
CB N:CYS102 4.9 48.8 1.0
N N:CYS102 4.9 48.8 1.0
N N:ALA73 4.9 26.5 1.0

Iron binding site 8 out of 24 in 6u8y

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Iron binding site 8 out of 24 in the Structure of An Archaea Respiratory Membrane Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of Structure of An Archaea Respiratory Membrane Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
N:Fe301

b:48.8
occ:1.00
 FE4 N:SF4301 0.0 48.8 1.0
S3 N:SF4301 2.3 48.8 1.0
S1 N:SF4301 2.3 48.8 1.0
S2 N:SF4301 2.3 48.8 1.0
FE3 N:SF4301 2.7 48.8 1.0
FE1 N:SF4301 2.7 48.8 1.0
FE2 N:SF4301 2.7 48.8 1.0
SG N:CYS96 3.0 48.8 1.0
CB N:CYS96 3.5 48.8 1.0
S4 N:SF4301 3.8 48.8 1.0
CA N:CYS96 4.0 48.8 1.0
N N:THR97 4.4 48.8 1.0
O N:ALA75 4.4 48.8 1.0
SG N:CYS71 4.5 25.5 1.0
NE2 N:HIS54 4.5 48.8 1.0
C N:CYS96 4.6 48.8 1.0
N N:PHE98 4.7 48.8 1.0
CG2 N:ILE91 4.8 35.5 1.0

Iron binding site 9 out of 24 in 6u8y

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Iron binding site 9 out of 24 in the Structure of An Archaea Respiratory Membrane Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 9 of Structure of An Archaea Respiratory Membrane Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
N:Fe302

b:48.8
occ:1.00
 FE1 N:SF4302 0.0 48.8 1.0
S2 N:SF4302 2.3 48.8 1.0
S3 N:SF4302 2.3 48.8 1.0
S4 N:SF4302 2.3 48.8 1.0
FE4 N:SF4302 2.7 48.8 1.0
FE3 N:SF4302 2.7 48.8 1.0
FE2 N:SF4302 2.7 48.8 1.0
SG N:CYS61 3.2 32.1 1.0
CB N:CYS61 3.8 32.1 1.0
CA N:CYS61 3.8 32.1 1.0
S1 N:SF4302 3.9 48.8 1.0
N N:ILE62 4.0 21.2 1.0
N N:GLY63 4.3 28.7 1.0
C N:CYS61 4.4 32.1 1.0
SG N:CYS106 4.7 22.3 1.0
O N:ALA110 4.8 24.9 1.0
CD N:PRO89 4.9 48.8 1.0
CB N:ALA110 4.9 24.9 1.0
CA N:GLY63 5.0 28.7 1.0

Iron binding site 10 out of 24 in 6u8y

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Iron binding site 10 out of 24 in the Structure of An Archaea Respiratory Membrane Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 10 of Structure of An Archaea Respiratory Membrane Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
N:Fe302

b:48.8
occ:1.00
 FE2 N:SF4302 0.0 48.8 1.0
S1 N:SF4302 2.3 48.8 1.0
S3 N:SF4302 2.3 48.8 1.0
S4 N:SF4302 2.3 48.8 1.0
FE4 N:SF4302 2.7 48.8 1.0
FE3 N:SF4302 2.7 48.8 1.0
FE1 N:SF4302 2.7 48.8 1.0
SG N:CYS106 3.1 22.3 1.0
CB N:CYS106 3.2 22.3 1.0
CA N:CYS106 3.5 22.3 1.0
CD N:PRO107 3.5 17.2 1.0
S2 N:SF4302 3.8 48.8 1.0
N N:PRO107 4.2 17.2 1.0
C N:CYS106 4.2 22.3 1.0
SG N:CYS64 4.6 28.4 1.0
N N:CYS106 4.7 22.3 1.0
CG N:PRO107 4.8 17.2 1.0
OG1 N:THR108 4.9 21.0 1.0

Reference:

H.J.Yu, H.L.Li. Structure of An Archaea Respiratory Membrane Complex To Be Published.
Page generated: Wed Aug 7 12:16:55 2024

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