Iron in PDB 8iag: Crystal Structure of Rdcaupo A161C Mutant From Daldinia Caldariorum

Protein crystallography data

The structure of Crystal Structure of Rdcaupo A161C Mutant From Daldinia Caldariorum, PDB code: 8iag was solved by T.Li, Y.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.04 / 1.50
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 74.558, 107.52, 120.016, 90, 90, 90
R / Rfree (%) 14.3 / 15.5

Other elements in 8iag:

The structure of Crystal Structure of Rdcaupo A161C Mutant From Daldinia Caldariorum also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Rdcaupo A161C Mutant From Daldinia Caldariorum (pdb code 8iag). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of Rdcaupo A161C Mutant From Daldinia Caldariorum, PDB code: 8iag:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 8iag

Go back to Iron Binding Sites List in 8iag
Iron binding site 1 out of 2 in the Crystal Structure of Rdcaupo A161C Mutant From Daldinia Caldariorum


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Rdcaupo A161C Mutant From Daldinia Caldariorum within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe301

b:13.4
occ:1.00
FE A:HEM301 0.0 13.4 1.0
ND A:HEM301 2.0 13.2 1.0
NB A:HEM301 2.0 13.8 1.0
NA A:HEM301 2.0 13.5 1.0
NC A:HEM301 2.0 14.0 1.0
N1 A:IMD302 2.1 15.7 1.0
SG A:CYS17 2.4 13.8 1.0
C1B A:HEM301 3.0 14.2 1.0
C1D A:HEM301 3.0 14.3 1.0
C4D A:HEM301 3.1 12.0 1.0
C4A A:HEM301 3.1 13.9 1.0
C4B A:HEM301 3.1 14.7 1.0
C1A A:HEM301 3.1 11.6 1.0
C4C A:HEM301 3.1 13.5 1.0
C5 A:IMD302 3.1 16.1 1.0
C1C A:HEM301 3.1 13.1 1.0
C2 A:IMD302 3.2 17.7 1.0
CB A:CYS17 3.4 12.8 1.0
CHD A:HEM301 3.4 15.1 1.0
CHB A:HEM301 3.4 13.7 1.0
CHA A:HEM301 3.4 12.0 1.0
CHC A:HEM301 3.4 13.3 1.0
C4 A:IMD302 4.2 14.2 1.0
C2B A:HEM301 4.3 14.5 1.0
C3B A:HEM301 4.3 15.8 1.0
C2D A:HEM301 4.3 12.5 1.0
C2C A:HEM301 4.3 13.7 1.0
CA A:CYS17 4.3 13.4 1.0
C3D A:HEM301 4.3 12.1 1.0
C3A A:HEM301 4.3 12.8 1.0
N3 A:IMD302 4.3 21.1 1.0
C2A A:HEM301 4.3 11.4 1.0
C3C A:HEM301 4.3 13.8 1.0
CG A:GLU158 5.0 14.6 1.0

Iron binding site 2 out of 2 in 8iag

Go back to Iron Binding Sites List in 8iag
Iron binding site 2 out of 2 in the Crystal Structure of Rdcaupo A161C Mutant From Daldinia Caldariorum


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of Rdcaupo A161C Mutant From Daldinia Caldariorum within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe301

b:13.0
occ:1.00
FE B:HEM301 0.0 13.0 1.0
NA B:HEM301 2.0 12.8 1.0
NB B:HEM301 2.0 14.1 1.0
ND B:HEM301 2.0 12.7 1.0
NC B:HEM301 2.0 13.2 1.0
N3 B:IMD302 2.1 14.4 1.0
SG B:CYS17 2.4 13.6 1.0
C4D B:HEM301 3.0 12.4 1.0
C2 B:IMD302 3.0 15.7 1.0
C1C B:HEM301 3.0 13.3 1.0
C1D B:HEM301 3.1 10.5 1.0
C4B B:HEM301 3.1 13.5 1.0
C1A B:HEM301 3.1 12.7 1.0
C1B B:HEM301 3.1 13.7 1.0
C4A B:HEM301 3.1 11.9 1.0
C4C B:HEM301 3.1 11.2 1.0
C4 B:IMD302 3.1 16.8 1.0
CB B:CYS17 3.4 11.8 1.0
CHC B:HEM301 3.4 12.5 1.0
CHA B:HEM301 3.4 12.2 1.0
CHD B:HEM301 3.4 12.0 1.0
CHB B:HEM301 3.5 13.8 1.0
N1 B:IMD302 4.2 15.8 1.0
C5 B:IMD302 4.3 15.4 1.0
C2C B:HEM301 4.3 14.2 1.0
CA B:CYS17 4.3 12.8 1.0
C3B B:HEM301 4.3 14.0 1.0
C3D B:HEM301 4.3 12.8 1.0
C2D B:HEM301 4.3 11.9 1.0
C2A B:HEM301 4.3 12.7 1.0
C2B B:HEM301 4.3 14.4 1.0
C3A B:HEM301 4.3 12.9 1.0
C3C B:HEM301 4.3 14.3 1.0

Reference:

T.Li, Y.Wang. Crystal Structure of Rdcaupo A161C Mutant From Daldinia Caldariorum To Be Published.
Page generated: Sat Aug 10 05:33:35 2024

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