Iron in PDB 8iag: Crystal Structure of Rdcaupo A161C Mutant From Daldinia Caldariorum
Protein crystallography data
The structure of Crystal Structure of Rdcaupo A161C Mutant From Daldinia Caldariorum, PDB code: 8iag
was solved by
T.Li,
Y.Wang,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
40.04 /
1.50
|
Space group
|
C 2 2 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
74.558,
107.52,
120.016,
90,
90,
90
|
R / Rfree (%)
|
14.3 /
15.5
|
Other elements in 8iag:
The structure of Crystal Structure of Rdcaupo A161C Mutant From Daldinia Caldariorum also contains other interesting chemical elements:
Iron Binding Sites:
The binding sites of Iron atom in the Crystal Structure of Rdcaupo A161C Mutant From Daldinia Caldariorum
(pdb code 8iag). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the
Crystal Structure of Rdcaupo A161C Mutant From Daldinia Caldariorum, PDB code: 8iag:
Jump to Iron binding site number:
1;
2;
Iron binding site 1 out
of 2 in 8iag
Go back to
Iron Binding Sites List in 8iag
Iron binding site 1 out
of 2 in the Crystal Structure of Rdcaupo A161C Mutant From Daldinia Caldariorum
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Crystal Structure of Rdcaupo A161C Mutant From Daldinia Caldariorum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe301
b:13.4
occ:1.00
|
FE
|
A:HEM301
|
0.0
|
13.4
|
1.0
|
ND
|
A:HEM301
|
2.0
|
13.2
|
1.0
|
NB
|
A:HEM301
|
2.0
|
13.8
|
1.0
|
NA
|
A:HEM301
|
2.0
|
13.5
|
1.0
|
NC
|
A:HEM301
|
2.0
|
14.0
|
1.0
|
N1
|
A:IMD302
|
2.1
|
15.7
|
1.0
|
SG
|
A:CYS17
|
2.4
|
13.8
|
1.0
|
C1B
|
A:HEM301
|
3.0
|
14.2
|
1.0
|
C1D
|
A:HEM301
|
3.0
|
14.3
|
1.0
|
C4D
|
A:HEM301
|
3.1
|
12.0
|
1.0
|
C4A
|
A:HEM301
|
3.1
|
13.9
|
1.0
|
C4B
|
A:HEM301
|
3.1
|
14.7
|
1.0
|
C1A
|
A:HEM301
|
3.1
|
11.6
|
1.0
|
C4C
|
A:HEM301
|
3.1
|
13.5
|
1.0
|
C5
|
A:IMD302
|
3.1
|
16.1
|
1.0
|
C1C
|
A:HEM301
|
3.1
|
13.1
|
1.0
|
C2
|
A:IMD302
|
3.2
|
17.7
|
1.0
|
CB
|
A:CYS17
|
3.4
|
12.8
|
1.0
|
CHD
|
A:HEM301
|
3.4
|
15.1
|
1.0
|
CHB
|
A:HEM301
|
3.4
|
13.7
|
1.0
|
CHA
|
A:HEM301
|
3.4
|
12.0
|
1.0
|
CHC
|
A:HEM301
|
3.4
|
13.3
|
1.0
|
C4
|
A:IMD302
|
4.2
|
14.2
|
1.0
|
C2B
|
A:HEM301
|
4.3
|
14.5
|
1.0
|
C3B
|
A:HEM301
|
4.3
|
15.8
|
1.0
|
C2D
|
A:HEM301
|
4.3
|
12.5
|
1.0
|
C2C
|
A:HEM301
|
4.3
|
13.7
|
1.0
|
CA
|
A:CYS17
|
4.3
|
13.4
|
1.0
|
C3D
|
A:HEM301
|
4.3
|
12.1
|
1.0
|
C3A
|
A:HEM301
|
4.3
|
12.8
|
1.0
|
N3
|
A:IMD302
|
4.3
|
21.1
|
1.0
|
C2A
|
A:HEM301
|
4.3
|
11.4
|
1.0
|
C3C
|
A:HEM301
|
4.3
|
13.8
|
1.0
|
CG
|
A:GLU158
|
5.0
|
14.6
|
1.0
|
|
Iron binding site 2 out
of 2 in 8iag
Go back to
Iron Binding Sites List in 8iag
Iron binding site 2 out
of 2 in the Crystal Structure of Rdcaupo A161C Mutant From Daldinia Caldariorum
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Crystal Structure of Rdcaupo A161C Mutant From Daldinia Caldariorum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe301
b:13.0
occ:1.00
|
FE
|
B:HEM301
|
0.0
|
13.0
|
1.0
|
NA
|
B:HEM301
|
2.0
|
12.8
|
1.0
|
NB
|
B:HEM301
|
2.0
|
14.1
|
1.0
|
ND
|
B:HEM301
|
2.0
|
12.7
|
1.0
|
NC
|
B:HEM301
|
2.0
|
13.2
|
1.0
|
N3
|
B:IMD302
|
2.1
|
14.4
|
1.0
|
SG
|
B:CYS17
|
2.4
|
13.6
|
1.0
|
C4D
|
B:HEM301
|
3.0
|
12.4
|
1.0
|
C2
|
B:IMD302
|
3.0
|
15.7
|
1.0
|
C1C
|
B:HEM301
|
3.0
|
13.3
|
1.0
|
C1D
|
B:HEM301
|
3.1
|
10.5
|
1.0
|
C4B
|
B:HEM301
|
3.1
|
13.5
|
1.0
|
C1A
|
B:HEM301
|
3.1
|
12.7
|
1.0
|
C1B
|
B:HEM301
|
3.1
|
13.7
|
1.0
|
C4A
|
B:HEM301
|
3.1
|
11.9
|
1.0
|
C4C
|
B:HEM301
|
3.1
|
11.2
|
1.0
|
C4
|
B:IMD302
|
3.1
|
16.8
|
1.0
|
CB
|
B:CYS17
|
3.4
|
11.8
|
1.0
|
CHC
|
B:HEM301
|
3.4
|
12.5
|
1.0
|
CHA
|
B:HEM301
|
3.4
|
12.2
|
1.0
|
CHD
|
B:HEM301
|
3.4
|
12.0
|
1.0
|
CHB
|
B:HEM301
|
3.5
|
13.8
|
1.0
|
N1
|
B:IMD302
|
4.2
|
15.8
|
1.0
|
C5
|
B:IMD302
|
4.3
|
15.4
|
1.0
|
C2C
|
B:HEM301
|
4.3
|
14.2
|
1.0
|
CA
|
B:CYS17
|
4.3
|
12.8
|
1.0
|
C3B
|
B:HEM301
|
4.3
|
14.0
|
1.0
|
C3D
|
B:HEM301
|
4.3
|
12.8
|
1.0
|
C2D
|
B:HEM301
|
4.3
|
11.9
|
1.0
|
C2A
|
B:HEM301
|
4.3
|
12.7
|
1.0
|
C2B
|
B:HEM301
|
4.3
|
14.4
|
1.0
|
C3A
|
B:HEM301
|
4.3
|
12.9
|
1.0
|
C3C
|
B:HEM301
|
4.3
|
14.3
|
1.0
|
|
Reference:
T.Li,
Y.Wang.
Crystal Structure of Rdcaupo A161C Mutant From Daldinia Caldariorum To Be Published.
Page generated: Sat Aug 10 05:33:35 2024
|