Iron in PDB 8kei: Cryo-Em Structure of Nadph Oxidase 2 in Complex with P22PHOX and Eros
Iron Binding Sites:
The binding sites of Iron atom in the Cryo-Em Structure of Nadph Oxidase 2 in Complex with P22PHOX and Eros
(pdb code 8kei). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the
Cryo-Em Structure of Nadph Oxidase 2 in Complex with P22PHOX and Eros, PDB code: 8kei:
Jump to Iron binding site number:
1;
2;
Iron binding site 1 out
of 2 in 8kei
Go back to
Iron Binding Sites List in 8kei
Iron binding site 1 out
of 2 in the Cryo-Em Structure of Nadph Oxidase 2 in Complex with P22PHOX and Eros
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Cryo-Em Structure of Nadph Oxidase 2 in Complex with P22PHOX and Eros within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe601
b:48.5
occ:1.00
|
FE
|
B:HEM601
|
0.0
|
48.5
|
1.0
|
NC
|
B:HEM601
|
2.0
|
48.5
|
1.0
|
ND
|
B:HEM601
|
2.0
|
48.5
|
1.0
|
NB
|
B:HEM601
|
2.0
|
48.5
|
1.0
|
NA
|
B:HEM601
|
2.0
|
48.5
|
1.0
|
NE2
|
B:HIS115
|
2.2
|
36.3
|
1.0
|
CE1
|
B:HIS222
|
3.0
|
40.5
|
1.0
|
NE2
|
B:HIS222
|
3.0
|
40.5
|
1.0
|
C1C
|
B:HEM601
|
3.0
|
48.5
|
1.0
|
C4D
|
B:HEM601
|
3.1
|
48.5
|
1.0
|
C1D
|
B:HEM601
|
3.1
|
48.5
|
1.0
|
C1B
|
B:HEM601
|
3.1
|
48.5
|
1.0
|
C4B
|
B:HEM601
|
3.1
|
48.5
|
1.0
|
C4A
|
B:HEM601
|
3.1
|
48.5
|
1.0
|
C1A
|
B:HEM601
|
3.1
|
48.5
|
1.0
|
C4C
|
B:HEM601
|
3.1
|
48.5
|
1.0
|
CE1
|
B:HIS115
|
3.1
|
36.3
|
1.0
|
CD2
|
B:HIS115
|
3.3
|
36.3
|
1.0
|
CHC
|
B:HEM601
|
3.4
|
48.5
|
1.0
|
CHA
|
B:HEM601
|
3.4
|
48.5
|
1.0
|
CHD
|
B:HEM601
|
3.4
|
48.5
|
1.0
|
CHB
|
B:HEM601
|
3.4
|
48.5
|
1.0
|
ND1
|
B:HIS222
|
4.0
|
40.5
|
1.0
|
CD2
|
B:HIS222
|
4.1
|
40.5
|
1.0
|
ND1
|
B:HIS115
|
4.2
|
36.3
|
1.0
|
C2C
|
B:HEM601
|
4.3
|
48.5
|
1.0
|
C2D
|
B:HEM601
|
4.3
|
48.5
|
1.0
|
C3D
|
B:HEM601
|
4.3
|
48.5
|
1.0
|
C2B
|
B:HEM601
|
4.3
|
48.5
|
1.0
|
C3A
|
B:HEM601
|
4.3
|
48.5
|
1.0
|
C2A
|
B:HEM601
|
4.3
|
48.5
|
1.0
|
C3B
|
B:HEM601
|
4.3
|
48.5
|
1.0
|
C3C
|
B:HEM601
|
4.3
|
48.5
|
1.0
|
CG
|
B:HIS115
|
4.3
|
36.3
|
1.0
|
CG
|
B:HIS222
|
4.5
|
40.5
|
1.0
|
ND1
|
B:HIS119
|
4.6
|
39.7
|
1.0
|
O
|
B:ALA175
|
4.9
|
39.1
|
1.0
|
CE1
|
B:HIS119
|
5.0
|
39.7
|
1.0
|
|
Iron binding site 2 out
of 2 in 8kei
Go back to
Iron Binding Sites List in 8kei
Iron binding site 2 out
of 2 in the Cryo-Em Structure of Nadph Oxidase 2 in Complex with P22PHOX and Eros
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Cryo-Em Structure of Nadph Oxidase 2 in Complex with P22PHOX and Eros within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe602
b:50.3
occ:1.00
|
FE
|
B:HEM602
|
0.0
|
50.3
|
1.0
|
NA
|
B:HEM602
|
2.0
|
50.3
|
1.0
|
NB
|
B:HEM602
|
2.0
|
50.3
|
1.0
|
ND
|
B:HEM602
|
2.0
|
50.3
|
1.0
|
NC
|
B:HEM602
|
2.0
|
50.3
|
1.0
|
NE2
|
B:HIS101
|
2.1
|
48.0
|
1.0
|
NE2
|
B:HIS209
|
2.8
|
58.9
|
1.0
|
CD2
|
B:HIS101
|
2.9
|
48.0
|
1.0
|
CE1
|
B:HIS209
|
3.0
|
58.9
|
1.0
|
C1D
|
B:HEM602
|
3.0
|
50.3
|
1.0
|
C4D
|
B:HEM602
|
3.0
|
50.3
|
1.0
|
C4B
|
B:HEM602
|
3.1
|
50.3
|
1.0
|
C1B
|
B:HEM602
|
3.1
|
50.3
|
1.0
|
C4A
|
B:HEM602
|
3.1
|
50.3
|
1.0
|
C1A
|
B:HEM602
|
3.1
|
50.3
|
1.0
|
C1C
|
B:HEM602
|
3.1
|
50.3
|
1.0
|
C4C
|
B:HEM602
|
3.1
|
50.3
|
1.0
|
CE1
|
B:HIS101
|
3.2
|
48.0
|
1.0
|
CHC
|
B:HEM602
|
3.4
|
50.3
|
1.0
|
CHD
|
B:HEM602
|
3.4
|
50.3
|
1.0
|
CHA
|
B:HEM602
|
3.4
|
50.3
|
1.0
|
CHB
|
B:HEM602
|
3.4
|
50.3
|
1.0
|
CD2
|
B:HIS209
|
4.1
|
58.9
|
1.0
|
CG
|
B:HIS101
|
4.1
|
48.0
|
1.0
|
ND1
|
B:HIS101
|
4.2
|
48.0
|
1.0
|
C2D
|
B:HEM602
|
4.2
|
50.3
|
1.0
|
C3D
|
B:HEM602
|
4.2
|
50.3
|
1.0
|
ND1
|
B:HIS209
|
4.3
|
58.9
|
1.0
|
C3A
|
B:HEM602
|
4.3
|
50.3
|
1.0
|
C2A
|
B:HEM602
|
4.3
|
50.3
|
1.0
|
C2B
|
B:HEM602
|
4.3
|
50.3
|
1.0
|
C3B
|
B:HEM602
|
4.3
|
50.3
|
1.0
|
C2C
|
B:HEM602
|
4.3
|
50.3
|
1.0
|
C3C
|
B:HEM602
|
4.3
|
50.3
|
1.0
|
CG
|
B:HIS209
|
4.8
|
58.9
|
1.0
|
|
Reference:
S.Y.Liang,
A.J.Liu,
Y.Z.Liu,
R.D.Ye.
Cryo-Em Structure of Nadph Oxidase 2 in Complex with P22PHOX and Eros To Be Published.
Page generated: Sat Aug 10 07:38:19 2024
|