Iron in PDB 8p47: Ipns Variant N252A in Complex with Fe and Acv Under Anaerobic Conditions

Enzymatic activity of Ipns Variant N252A in Complex with Fe and Acv Under Anaerobic Conditions

All present enzymatic activity of Ipns Variant N252A in Complex with Fe and Acv Under Anaerobic Conditions:
1.21.3.1;

Protein crystallography data

The structure of Ipns Variant N252A in Complex with Fe and Acv Under Anaerobic Conditions, PDB code: 8p47 was solved by P.Rabe, C.J.Schofield, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.73 / 1.56
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 41.675, 74.73, 101.459, 90, 90, 90
R / Rfree (%) 18.1 / 20.9

Iron Binding Sites:

The binding sites of Iron atom in the Ipns Variant N252A in Complex with Fe and Acv Under Anaerobic Conditions (pdb code 8p47). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Ipns Variant N252A in Complex with Fe and Acv Under Anaerobic Conditions, PDB code: 8p47:

Iron binding site 1 out of 1 in 8p47

Go back to Iron Binding Sites List in 8p47
Iron binding site 1 out of 1 in the Ipns Variant N252A in Complex with Fe and Acv Under Anaerobic Conditions


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Ipns Variant N252A in Complex with Fe and Acv Under Anaerobic Conditions within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe405

b:17.8
occ:1.00
OD1 A:ASP216 2.0 19.3 1.0
NE2 A:HIS214 2.2 15.4 1.0
NE2 A:HIS270 2.2 15.9 1.0
O A:HOH784 2.2 18.6 1.0
S17 A:ACV404 2.3 17.7 1.0
CG A:ASP216 3.0 20.0 1.0
CD2 A:HIS214 3.1 16.2 1.0
CE1 A:HIS270 3.1 18.4 1.0
CD2 A:HIS270 3.2 16.9 1.0
CE1 A:HIS214 3.2 13.3 1.0
HD2 A:HIS214 3.2 19.4 1.0
HE1 A:HIS270 3.2 22.1 1.0
OD2 A:ASP216 3.3 23.5 1.0
HD2 A:HIS270 3.4 20.2 1.0
HE1 A:HIS214 3.4 15.9 1.0
C16 A:ACV404 3.4 15.7 1.0
C37 A:ACV404 3.6 19.8 1.0
O A:HOH815 3.9 26.0 1.0
O A:HOH738 4.0 22.7 1.0
HA A:ASP216 4.1 20.2 1.0
C32 A:ACV404 4.2 21.5 1.0
ND1 A:HIS270 4.2 16.1 1.0
CG A:HIS214 4.2 14.6 1.0
ND1 A:HIS214 4.2 14.8 1.0
CG A:HIS270 4.3 14.9 1.0
CB A:ASP216 4.3 17.7 1.0
HE1 A:PHE285 4.4 15.2 1.0
CA A:ASP216 4.6 16.9 1.0
C12 A:ACV404 4.7 18.5 1.0
C13 A:ACV404 4.8 19.2 1.0
N A:ASP216 4.8 16.6 1.0
HB2 A:ASP216 4.8 21.2 1.0
HB3 A:ASP216 4.9 21.2 1.0
H A:ASP216 4.9 19.9 1.0
HG21 A:THR221 4.9 15.9 1.0
N29 A:ACV404 4.9 18.9 1.0
HD1 A:HIS270 5.0 19.3 1.0
O A:HOH658 5.0 17.5 1.0

Reference:

P.Rabe, C.J.Schofield. Ipns Variant N252A in Complex with Fe and Acv Under Anaerobic Conditions To Be Published.
Page generated: Sat Aug 10 08:47:18 2024

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