Iron in PDB 8p65: Cytochrome BC1 Complex (Bos Taurus)

Enzymatic activity of Cytochrome BC1 Complex (Bos Taurus)

All present enzymatic activity of Cytochrome BC1 Complex (Bos Taurus):
7.1.1.8;

Iron Binding Sites:

The binding sites of Iron atom in the Cytochrome BC1 Complex (Bos Taurus) (pdb code 8p65). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 10 binding sites of Iron where determined in the Cytochrome BC1 Complex (Bos Taurus), PDB code: 8p65:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iron binding site 1 out of 10 in 8p65

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Iron binding site 1 out of 10 in the Cytochrome BC1 Complex (Bos Taurus)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cytochrome BC1 Complex (Bos Taurus) within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe401

b:104.8
occ:1.00
FE C:HEM401 0.0 104.8 1.0
NE2 C:HIS182 2.0 65.2 1.0
ND C:HEM401 2.0 66.0 1.0
NC C:HEM401 2.0 73.2 1.0
NA C:HEM401 2.0 69.0 1.0
NB C:HEM401 2.0 73.5 1.0
CE1 C:HIS83 2.8 67.2 1.0
CE1 C:HIS182 3.0 57.5 1.0
CD2 C:HIS182 3.0 58.2 1.0
NE2 C:HIS83 3.0 66.9 1.0
C4D C:HEM401 3.0 66.5 1.0
C1D C:HEM401 3.0 73.0 1.0
C1C C:HEM401 3.1 71.6 1.0
C1A C:HEM401 3.1 62.0 1.0
C4C C:HEM401 3.1 66.9 1.0
C4B C:HEM401 3.1 71.6 1.0
C4A C:HEM401 3.1 65.1 1.0
C1B C:HEM401 3.1 67.8 1.0
CHA C:HEM401 3.4 62.2 1.0
CHC C:HEM401 3.4 75.5 1.0
CHD C:HEM401 3.4 70.1 1.0
CHB C:HEM401 3.4 63.1 1.0
ND1 C:HIS83 3.9 74.3 1.0
ND1 C:HIS182 4.1 60.1 1.0
CG C:HIS182 4.1 59.0 1.0
CD2 C:HIS83 4.2 68.7 1.0
C3D C:HEM401 4.3 69.6 1.0
C2D C:HEM401 4.3 70.1 1.0
C3A C:HEM401 4.3 69.0 1.0
C2A C:HEM401 4.3 70.0 1.0
C2C C:HEM401 4.3 65.9 1.0
C3C C:HEM401 4.3 63.0 1.0
C3B C:HEM401 4.3 70.9 1.0
C2B C:HEM401 4.3 67.7 1.0
CG C:HIS83 4.6 63.1 1.0
CA C:GLY130 4.7 59.6 1.0

Iron binding site 2 out of 10 in 8p65

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Iron binding site 2 out of 10 in the Cytochrome BC1 Complex (Bos Taurus)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cytochrome BC1 Complex (Bos Taurus) within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe402

b:81.9
occ:1.00
FE C:HEM402 0.0 81.9 1.0
NA C:HEM402 2.0 68.2 1.0
NC C:HEM402 2.0 72.2 1.0
NB C:HEM402 2.1 62.2 1.0
ND C:HEM402 2.1 70.8 1.0
NE2 C:HIS196 2.2 60.8 1.0
NE2 C:HIS97 2.7 57.8 1.0
CD2 C:HIS196 2.8 56.8 1.0
CE1 C:HIS196 3.0 55.7 1.0
C1C C:HEM402 3.0 62.0 1.0
C4A C:HEM402 3.0 63.1 1.0
C4C C:HEM402 3.0 65.6 1.0
C1A C:HEM402 3.0 61.6 1.0
C1D C:HEM402 3.1 67.3 1.0
C1B C:HEM402 3.1 55.8 1.0
C4B C:HEM402 3.1 64.9 1.0
CD2 C:HIS97 3.1 56.5 1.0
C4D C:HEM402 3.1 61.3 1.0
CHD C:HEM402 3.4 61.3 1.0
CHB C:HEM402 3.4 55.0 1.0
CHC C:HEM402 3.4 59.5 1.0
CHA C:HEM402 3.4 56.5 1.0
CG C:HIS196 3.8 53.0 1.0
ND1 C:HIS196 3.9 56.5 1.0
CE1 C:HIS97 3.9 63.0 1.0
C2C C:HEM402 4.2 67.1 1.0
C3C C:HEM402 4.2 64.7 1.0
C3A C:HEM402 4.2 62.8 1.0
C2A C:HEM402 4.2 63.0 1.0
C2D C:HEM402 4.3 63.6 1.0
C2B C:HEM402 4.3 60.3 1.0
C3B C:HEM402 4.3 65.5 1.0
C3D C:HEM402 4.3 59.0 1.0
CG C:HIS97 4.4 49.8 1.0
ND1 C:HIS97 4.8 57.3 1.0
CD1 C:LEU119 4.9 63.7 1.0

Iron binding site 3 out of 10 in 8p65

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Iron binding site 3 out of 10 in the Cytochrome BC1 Complex (Bos Taurus)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Cytochrome BC1 Complex (Bos Taurus) within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Fe301

b:96.0
occ:1.00
FE D:HEC301 0.0 96.0 1.0
NE2 D:HIS41 2.0 80.6 1.0
NB D:HEC301 2.0 62.9 1.0
NC D:HEC301 2.0 74.2 1.0
NA D:HEC301 2.1 72.4 1.0
ND D:HEC301 2.1 78.8 1.0
CD2 D:HIS41 2.3 77.6 1.0
C4B D:HEC301 3.0 71.5 1.0
C4D D:HEC301 3.0 70.0 1.0
C1A D:HEC301 3.1 72.9 1.0
C1C D:HEC301 3.1 66.9 1.0
CE D:MET160 3.1 67.7 1.0
C4C D:HEC301 3.1 72.1 1.0
C1B D:HEC301 3.1 63.5 1.0
C1D D:HEC301 3.1 72.3 1.0
C4A D:HEC301 3.1 69.7 1.0
SD D:MET160 3.1 87.8 1.0
CE1 D:HIS41 3.3 75.0 1.0
CHA D:HEC301 3.4 68.8 1.0
CHC D:HEC301 3.4 71.5 1.0
CHD D:HEC301 3.4 71.5 1.0
CHB D:HEC301 3.5 65.6 1.0
CG D:HIS41 3.6 67.1 1.0
ND1 D:HIS41 4.1 73.0 1.0
C3B D:HEC301 4.3 66.7 1.0
C2C D:HEC301 4.3 71.2 1.0
C2B D:HEC301 4.3 62.9 1.0
C3D D:HEC301 4.3 72.5 1.0
C2A D:HEC301 4.3 68.9 1.0
C3C D:HEC301 4.3 68.0 1.0
C2D D:HEC301 4.3 72.3 1.0
C3A D:HEC301 4.3 64.3 1.0
CB D:HIS41 4.8 70.1 1.0
CG D:MET160 4.9 88.6 1.0

Iron binding site 4 out of 10 in 8p65

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Iron binding site 4 out of 10 in the Cytochrome BC1 Complex (Bos Taurus)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Cytochrome BC1 Complex (Bos Taurus) within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Fe201

b:230.4
occ:1.00
FE1 E:FES201 0.0 230.4 1.0
S2 E:FES201 2.2 226.5 1.0
S1 E:FES201 2.2 226.4 1.0
SG E:CYS139 2.3 200.5 1.0
SG E:CYS158 2.3 198.1 1.0
FE2 E:FES201 2.7 232.5 1.0
CB E:CYS139 3.1 196.3 1.0
CB E:CYS158 3.3 199.5 1.0
ND1 E:HIS161 3.4 205.5 1.0
CE1 E:HIS161 3.9 204.7 1.0
CB E:CYS144 4.2 174.6 1.0
CG E:HIS161 4.3 204.7 1.0
CB E:CYS160 4.3 199.8 1.0
N E:HIS161 4.3 204.5 1.0
CB E:SER163 4.4 217.2 1.0
CB E:HIS141 4.4 196.8 1.0
CA E:CYS139 4.6 195.2 1.0
N E:GLY162 4.7 208.2 1.0
CA E:CYS158 4.7 199.8 1.0
CB E:HIS161 4.7 204.1 1.0
OH E:TYR165 4.8 211.4 1.0
ND1 E:HIS141 4.8 197.6 1.0
NE2 E:HIS161 4.9 203.8 1.0
SG E:CYS144 4.9 179.0 1.0

Iron binding site 5 out of 10 in 8p65

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Iron binding site 5 out of 10 in the Cytochrome BC1 Complex (Bos Taurus)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Cytochrome BC1 Complex (Bos Taurus) within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Fe201

b:232.5
occ:1.00
FE2 E:FES201 0.0 232.5 1.0
ND1 E:HIS161 2.1 205.5 1.0
ND1 E:HIS141 2.1 197.6 1.0
S2 E:FES201 2.2 226.5 1.0
S1 E:FES201 2.2 226.4 1.0
CE1 E:HIS161 2.4 204.7 1.0
CB E:HIS141 2.6 196.8 1.0
FE1 E:FES201 2.7 230.4 1.0
CG E:HIS141 2.7 197.5 1.0
CE1 E:HIS141 3.4 196.3 1.0
CG E:HIS161 3.5 204.7 1.0
N E:LEU142 3.6 172.4 1.0
NE2 E:HIS161 3.7 203.8 1.0
CA E:HIS141 3.8 197.1 1.0
SG E:CYS139 3.9 200.5 1.0
CD2 E:HIS141 4.0 196.0 1.0
C E:HIS141 4.0 196.4 1.0
CD2 E:HIS161 4.2 204.0 1.0
CB E:LEU142 4.2 169.2 1.0
NE2 E:HIS141 4.3 196.6 1.0
CB E:HIS161 4.3 204.1 1.0
N E:HIS141 4.3 196.6 1.0
CA E:LEU142 4.5 170.5 1.0
CG E:LEU142 4.6 168.6 1.0
CB E:CYS139 4.7 196.3 1.0
SG E:CYS158 4.8 198.1 1.0
CD1 E:LEU142 4.9 167.8 1.0

Iron binding site 6 out of 10 in 8p65

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Iron binding site 6 out of 10 in the Cytochrome BC1 Complex (Bos Taurus)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Cytochrome BC1 Complex (Bos Taurus) within 5.0Å range:
probe atom residue distance (Å) B Occ
P:Fe401

b:107.2
occ:1.00
FE P:HEM401 0.0 107.2 1.0
NE2 P:HIS182 2.0 66.8 1.0
ND P:HEM401 2.0 66.5 1.0
NA P:HEM401 2.0 66.5 1.0
NC P:HEM401 2.0 69.8 1.0
NB P:HEM401 2.0 68.5 1.0
CE1 P:HIS83 2.8 66.2 1.0
CE1 P:HIS182 3.0 58.2 1.0
CD2 P:HIS182 3.0 59.3 1.0
C4D P:HEM401 3.0 65.7 1.0
C1D P:HEM401 3.0 69.2 1.0
C4A P:HEM401 3.1 64.7 1.0
C1A P:HEM401 3.1 61.4 1.0
C4C P:HEM401 3.1 59.7 1.0
C1C P:HEM401 3.1 69.1 1.0
C4B P:HEM401 3.1 66.0 1.0
C1B P:HEM401 3.1 64.8 1.0
NE2 P:HIS83 3.2 63.4 1.0
CHA P:HEM401 3.4 57.8 1.0
CHD P:HEM401 3.4 64.7 1.0
CHC P:HEM401 3.4 70.8 1.0
CHB P:HEM401 3.4 61.5 1.0
ND1 P:HIS83 3.7 74.0 1.0
ND1 P:HIS182 4.1 61.9 1.0
CG P:HIS182 4.1 59.1 1.0
CD2 P:HIS83 4.2 64.5 1.0
C2D P:HEM401 4.3 64.1 1.0
C3D P:HEM401 4.3 66.0 1.0
C3A P:HEM401 4.3 68.5 1.0
C2A P:HEM401 4.3 70.0 1.0
C2C P:HEM401 4.3 63.0 1.0
C3C P:HEM401 4.3 59.6 1.0
C3B P:HEM401 4.3 68.2 1.0
C2B P:HEM401 4.3 66.8 1.0
CG P:HIS83 4.5 63.6 1.0
CA P:GLY130 4.8 60.5 1.0

Iron binding site 7 out of 10 in 8p65

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Iron binding site 7 out of 10 in the Cytochrome BC1 Complex (Bos Taurus)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of Cytochrome BC1 Complex (Bos Taurus) within 5.0Å range:
probe atom residue distance (Å) B Occ
P:Fe402

b:89.3
occ:1.00
FE P:HEM402 0.0 89.3 1.0
NA P:HEM402 2.0 69.3 1.0
NC P:HEM402 2.0 71.8 1.0
NB P:HEM402 2.1 62.0 1.0
ND P:HEM402 2.1 73.8 1.0
NE2 P:HIS196 2.1 62.2 1.0
NE2 P:HIS97 2.7 59.1 1.0
CD2 P:HIS196 2.8 61.1 1.0
CE1 P:HIS196 3.0 59.8 1.0
C1C P:HEM402 3.0 63.2 1.0
C4A P:HEM402 3.0 62.5 1.0
C4C P:HEM402 3.0 67.7 1.0
C1A P:HEM402 3.0 63.0 1.0
C1D P:HEM402 3.1 67.3 1.0
C1B P:HEM402 3.1 54.9 1.0
C4B P:HEM402 3.1 65.7 1.0
C4D P:HEM402 3.1 62.3 1.0
CD2 P:HIS97 3.2 56.0 1.0
CHD P:HEM402 3.4 61.4 1.0
CHB P:HEM402 3.4 55.1 1.0
CHC P:HEM402 3.4 62.1 1.0
CHA P:HEM402 3.4 57.1 1.0
CE1 P:HIS97 3.8 64.5 1.0
CG P:HIS196 3.8 59.4 1.0
ND1 P:HIS196 3.8 63.8 1.0
C2C P:HEM402 4.2 68.5 1.0
C3C P:HEM402 4.2 66.7 1.0
C3A P:HEM402 4.2 64.9 1.0
C2A P:HEM402 4.2 66.2 1.0
C2B P:HEM402 4.3 59.7 1.0
C2D P:HEM402 4.3 64.1 1.0
C3B P:HEM402 4.3 62.5 1.0
C3D P:HEM402 4.3 60.9 1.0
CG P:HIS97 4.4 49.0 1.0
ND1 P:HIS97 4.7 60.0 1.0
CD1 P:LEU119 4.9 61.7 1.0

Iron binding site 8 out of 10 in 8p65

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Iron binding site 8 out of 10 in the Cytochrome BC1 Complex (Bos Taurus)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of Cytochrome BC1 Complex (Bos Taurus) within 5.0Å range:
probe atom residue distance (Å) B Occ
Q:Fe301

b:97.9
occ:1.00
FE Q:HEC301 0.0 97.9 1.0
SD Q:MET160 1.8 85.4 1.0
NB Q:HEC301 2.0 64.7 1.0
NC Q:HEC301 2.0 75.3 1.0
NA Q:HEC301 2.0 68.7 1.0
ND Q:HEC301 2.1 78.4 1.0
NE2 Q:HIS41 2.7 76.2 1.0
C4B Q:HEC301 3.0 72.2 1.0
C1A Q:HEC301 3.1 71.7 1.0
C1C Q:HEC301 3.1 66.5 1.0
C4D Q:HEC301 3.1 68.0 1.0
C1B Q:HEC301 3.1 62.1 1.0
CE Q:MET160 3.1 71.0 1.0
C4C Q:HEC301 3.1 75.8 1.0
C4A Q:HEC301 3.1 65.7 1.0
C1D Q:HEC301 3.1 71.7 1.0
CD2 Q:HIS41 3.1 76.9 1.0
CG Q:MET160 3.4 70.8 1.0
CHC Q:HEC301 3.4 70.7 1.0
CHA Q:HEC301 3.4 70.1 1.0
CHD Q:HEC301 3.4 74.0 1.0
CHB Q:HEC301 3.5 61.6 1.0
CE1 Q:HIS41 3.6 76.2 1.0
CG Q:HIS41 4.2 69.9 1.0
CB Q:MET160 4.3 71.8 1.0
C3B Q:HEC301 4.3 63.9 1.0
C2C Q:HEC301 4.3 70.6 1.0
C2B Q:HEC301 4.3 61.7 1.0
C2A Q:HEC301 4.3 67.4 1.0
C3C Q:HEC301 4.3 68.3 1.0
C3A Q:HEC301 4.3 64.7 1.0
C3D Q:HEC301 4.3 69.2 1.0
C2D Q:HEC301 4.3 69.6 1.0
ND1 Q:HIS41 4.4 73.3 1.0

Iron binding site 9 out of 10 in 8p65

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Iron binding site 9 out of 10 in the Cytochrome BC1 Complex (Bos Taurus)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 9 of Cytochrome BC1 Complex (Bos Taurus) within 5.0Å range:
probe atom residue distance (Å) B Occ
R:Fe201

b:250.5
occ:1.00
FE1 R:FES201 0.0 250.5 1.0
NE2 R:HIS161 2.1 214.1 1.0
S2 R:FES201 2.2 241.9 1.0
S1 R:FES201 2.2 242.7 1.0
SG R:CYS139 2.3 199.4 1.0
CD2 R:HIS161 2.5 213.8 1.0
FE2 R:FES201 2.7 250.9 1.0
CB R:CYS139 3.0 194.1 1.0
CE1 R:HIS161 3.1 213.7 1.0
CG R:HIS161 3.5 213.9 1.0
ND1 R:HIS161 3.8 213.9 1.0
CB R:CYS158 3.8 217.2 1.0
SG R:CYS158 3.8 219.2 1.0
CB R:CYS144 4.1 180.2 1.0
SG R:CYS144 4.2 185.2 1.0
CA R:CYS139 4.5 192.3 1.0
N R:HIS161 4.6 214.7 1.0
CB R:CYS160 4.7 215.4 1.0
CB R:HIS161 4.8 213.2 1.0
SG R:CYS160 4.9 217.6 1.0
CA R:CYS158 5.0 217.5 1.0
CB R:HIS141 5.0 176.1 1.0

Iron binding site 10 out of 10 in 8p65

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Iron binding site 10 out of 10 in the Cytochrome BC1 Complex (Bos Taurus)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 10 of Cytochrome BC1 Complex (Bos Taurus) within 5.0Å range:
probe atom residue distance (Å) B Occ
R:Fe201

b:250.9
occ:1.00
FE2 R:FES201 0.0 250.9 1.0
S1 R:FES201 2.2 242.7 1.0
S2 R:FES201 2.2 241.9 1.0
SG R:CYS144 2.3 185.2 1.0
SG R:CYS160 2.3 217.6 1.0
CB R:CYS144 2.6 180.2 1.0
FE1 R:FES201 2.7 250.5 1.0
CB R:CYS160 2.7 215.4 1.0
N R:CYS160 3.8 216.1 1.0
CA R:CYS160 3.8 215.0 1.0
CD2 R:HIS161 4.1 213.8 1.0
CA R:CYS144 4.1 179.5 1.0
N R:HIS161 4.3 214.7 1.0
NE2 R:HIS161 4.5 214.1 1.0
CB R:CYS139 4.5 194.1 1.0
C R:CYS160 4.6 215.2 1.0
C R:CYS144 4.6 179.4 1.0
SG R:CYS139 4.7 199.4 1.0
CB R:CYS158 4.7 217.2 1.0
N R:CYS144 4.8 180.5 1.0
O R:CYS144 4.8 180.1 1.0
CG R:HIS161 4.9 213.9 1.0
SG R:CYS158 4.9 219.2 1.0

Reference:

B.P.Phillips, I.M.C.C.Barra, T.K.Meier. Cytochrome BC1 Complex (Bos Taurus) To Be Published.
Page generated: Sat Aug 10 08:49:07 2024

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