Iron in PDB 8q1v: TTX183A - A C-Type Cytochrome Domain From the Teredinibacter Turnerae Protein TERTU_2913

Protein crystallography data

The structure of TTX183A - A C-Type Cytochrome Domain From the Teredinibacter Turnerae Protein TERTU_2913, PDB code: 8q1v was solved by B.S.Rajagopal, G.R.Hemsworth, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 65.53 / 1.40
Space group P 41 3 2
Cell size a, b, c (Å), α, β, γ (°) 92.669, 92.669, 92.669, 90, 90, 90
R / Rfree (%) 16.5 / 19.3

Other elements in 8q1v:

The structure of TTX183A - A C-Type Cytochrome Domain From the Teredinibacter Turnerae Protein TERTU_2913 also contains other interesting chemical elements:

Chlorine (Cl) 3 atoms

Iron Binding Sites:

The binding sites of Iron atom in the TTX183A - A C-Type Cytochrome Domain From the Teredinibacter Turnerae Protein TERTU_2913 (pdb code 8q1v). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the TTX183A - A C-Type Cytochrome Domain From the Teredinibacter Turnerae Protein TERTU_2913, PDB code: 8q1v:

Iron binding site 1 out of 1 in 8q1v

Go back to Iron Binding Sites List in 8q1v
Iron binding site 1 out of 1 in the TTX183A - A C-Type Cytochrome Domain From the Teredinibacter Turnerae Protein TERTU_2913


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of TTX183A - A C-Type Cytochrome Domain From the Teredinibacter Turnerae Protein TERTU_2913 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe101

b:12.7
occ:1.00
FE A:HEC101 0.0 12.7 1.0
HE2 A:HIS22 1.2 13.4 0.0
ND A:HEC101 2.0 12.5 1.0
NA A:HEC101 2.0 11.6 1.0
NB A:HEC101 2.0 11.6 1.0
NE2 A:HIS22 2.0 13.9 1.0
NC A:HEC101 2.0 12.6 1.0
SD A:MET55 2.3 12.0 1.0
C1D A:HEC101 3.0 13.2 1.0
CE1 A:HIS22 3.0 15.9 1.0
C4D A:HEC101 3.0 13.4 1.0
C4C A:HEC101 3.0 12.8 1.0
C4B A:HEC101 3.0 12.3 1.0
C1A A:HEC101 3.0 12.6 1.0
C1B A:HEC101 3.0 11.5 1.0
C4A A:HEC101 3.0 11.5 1.0
C1C A:HEC101 3.0 12.8 1.0
CD2 A:HIS22 3.1 15.3 1.0
HE1 A:HIS22 3.2 15.5 1.0
HG3 A:MET55 3.2 11.7 1.0
HD2 A:HIS22 3.3 15.0 1.0
CHD A:HEC101 3.4 12.8 1.0
CHB A:HEC101 3.4 11.4 1.0
CG A:MET55 3.4 11.7 1.0
CHA A:HEC101 3.4 13.4 1.0
CE A:MET55 3.4 12.6 1.0
CHC A:HEC101 3.4 12.6 1.0
HE2 A:MET55 3.5 12.5 1.0
HE3 A:MET55 3.5 12.4 1.0
HB3 A:MET55 4.0 11.7 1.0
HG2 A:MET55 4.1 11.7 1.0
ND1 A:HIS22 4.1 15.6 1.0
CG A:HIS22 4.2 15.5 1.0
C3C A:HEC101 4.2 12.7 1.0
C2D A:HEC101 4.3 14.4 1.0
HE1 A:MET55 4.3 12.5 1.0
C3B A:HEC101 4.3 12.1 1.0
C2B A:HEC101 4.3 12.1 1.0
C3A A:HEC101 4.3 12.7 1.0
C3D A:HEC101 4.3 14.6 1.0
CB A:MET55 4.3 11.7 1.0
C2C A:HEC101 4.3 13.5 1.0
C2A A:HEC101 4.3 13.0 1.0
HHD A:HEC101 4.3 12.8 1.0
HHB A:HEC101 4.4 11.5 1.0
HHC A:HEC101 4.4 12.6 1.0
HHA A:HEC101 4.4 13.3 1.0
HB2 A:LEU57 4.5 14.6 1.0
HD23 A:LEU35 4.5 21.2 1.0
H A:LEU57 4.6 13.4 1.0
HA A:PRO56 4.7 13.6 1.0
HB2 A:MET55 4.9 11.7 1.0
HD1 A:HIS22 4.9 15.5 0.0

Reference:

B.S.Rajagopal, N.Yates, J.Smith, A.Paradisi, C.Tetard-Jones, W.G.T.Willats, S.Marcus, P.J.Knox, M.Firdaus-Raih, B.Henrissat, G.J.Davies, P.H.Walton, A.Parkin, G.R.Hemsworth. Structural Dissection of Two Redox Proteins From the Shipworm Symbiont Teredinibacter Turnerae Iucrj 2024.
ISSN: ESSN 2052-2525
DOI: 10.1107/S2052252524001386
Page generated: Sat Aug 10 13:55:05 2024

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