Iron in PDB 8smr: Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa

The structure of Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa also contains other interesting chemical elements:

Copper	(Cu)	1 atom
Calcium	(Ca)	2 atoms

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 19;

Binding sites:

The binding sites of Iron atom in the Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa (pdb code 8smr). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 19 binding sites of Iron where determined in the Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa, PDB code: 8smr:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iron binding site 1 out of 19 in the Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe201 b:138.3 occ:1.00 FE1 C:FES201 0.0 138.3 1.0 S2 C:FES201 2.2 128.7 1.0 S1 C:FES201 2.2 133.2 1.0 SG C:CYS152 2.3 90.5 1.0 SG C:CYS124 2.3 85.0 1.0 SG C:CYS129 2.3 88.4 1.0 FE2 C:FES201 2.7 132.6 1.0 O C:HIS126 3.0 84.1 1.0 CB C:CYS124 3.1 80.7 1.0 CB C:CYS152 3.6 85.0 1.0 CB C:CYS129 3.9 82.2 1.0 OG C:SER157 4.1 85.8 1.0 C C:HIS126 4.1 85.5 1.0 ND1 C:HIS126 4.1 87.2 1.0 N C:CYS129 4.4 82.0 1.0 ND1 C:HIS155 4.4 88.2 1.0 CB C:HIS126 4.5 83.9 1.0 CA C:CYS124 4.5 78.3 1.0 CB C:SER157 4.5 85.5 1.0 CA C:CYS129 4.6 82.3 1.0 O C:CYS129 4.7 79.8 1.0 CA C:HIS126 4.7 84.7 1.0 CB C:CYS154 4.7 81.6 1.0 OH C:TYR159 4.7 81.5 1.0 N C:HIS126 4.7 86.1 1.0 CG C:HIS126 4.8 85.2 1.0 C C:CYS124 4.8 76.1 1.0 CA C:CYS152 4.8 84.9 1.0 N C:HIS155 4.9 85.3 1.0 C C:CYS129 4.9 82.2 1.0 O C:CYS124 5.0 76.0 1.0

Iron binding site 2 out of 19 in the Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe201 b:132.6 occ:1.00 FE2 C:FES201 0.0 132.6 1.0 ND1 C:HIS155 2.1 88.2 1.0 ND1 C:HIS126 2.2 87.2 1.0 S2 C:FES201 2.2 128.7 1.0 S1 C:FES201 2.2 133.2 1.0 FE1 C:FES201 2.7 138.3 1.0 O C:HIS126 2.8 84.1 1.0 CE1 C:HIS126 2.8 85.9 1.0 CE1 C:HIS155 3.0 86.9 1.0 CG C:HIS155 3.0 87.5 1.0 CG C:HIS126 3.4 85.2 1.0 CB C:HIS155 3.4 86.3 1.0 C C:HIS126 3.7 85.5 1.0 CB C:HIS126 4.0 83.9 1.0 CB C:LEU127 4.0 75.5 1.0 NE2 C:HIS126 4.0 85.1 1.0 SG C:CYS152 4.0 90.5 1.0 NE2 C:HIS155 4.0 85.6 1.0 CD2 C:HIS155 4.1 85.5 1.0 N C:HIS155 4.1 85.3 1.0 CG C:LEU127 4.2 75.9 1.0 SG C:CYS129 4.2 88.4 1.0 CB C:CYS154 4.3 81.6 1.0 CD2 C:HIS126 4.3 83.9 1.0 CA C:HIS155 4.3 85.6 1.0 SG C:CYS124 4.4 85.0 1.0 CA C:HIS126 4.5 84.7 1.0 OG C:SER157 4.5 85.8 1.0 N C:LEU127 4.6 77.0 1.0 CD1 C:LEU127 4.8 74.9 1.0 C C:CYS154 4.8 81.1 1.0 CA C:LEU127 4.8 74.8 1.0 CB C:PRO170 4.9 85.4 1.0

Iron binding site 3 out of 19 in the Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa within 5.0Å range: probe atom residue distance (Å) B Occ I:Fe501 b:32.8 occ:1.00 FE I:HEM501 0.0 32.8 1.0 NE2 I:HIS101 2.0 13.7 1.0 NB I:HEM501 2.0 13.0 1.0 NC I:HEM501 2.1 9.5 1.0 ND I:HEM501 2.1 5.8 1.0 NA I:HEM501 2.1 6.0 1.0 NE2 I:HIS203 2.6 6.3 1.0 CD2 I:HIS101 2.7 4.2 1.0 C1B I:HEM501 3.0 2.5 1.0 C4A I:HEM501 3.0 5.5 1.0 C1A I:HEM501 3.1 3.4 1.0 C1C I:HEM501 3.1 3.1 1.0 C4C I:HEM501 3.1 6.3 1.0 C4D I:HEM501 3.1 5.4 1.0 C4B I:HEM501 3.1 0.6 1.0 CE1 I:HIS101 3.1 12.3 1.0 C1D I:HEM501 3.1 3.0 1.0 CD2 I:HIS203 3.2 0.0 1.0 CHB I:HEM501 3.4 7.2 1.0 CHC I:HEM501 3.4 0.5 1.0 CHA I:HEM501 3.4 8.6 1.0 CHD I:HEM501 3.4 8.8 1.0 CE1 I:HIS203 3.7 12.8 1.0 CG I:HIS101 3.9 3.5 1.0 ND1 I:HIS101 4.0 11.3 1.0 C3A I:HEM501 4.2 8.8 1.0 C2A I:HEM501 4.2 8.2 1.0 C2B I:HEM501 4.3 8.4 1.0 C3C I:HEM501 4.3 6.5 1.0 C2C I:HEM501 4.3 8.4 1.0 C3B I:HEM501 4.3 10.5 1.0 C3D I:HEM501 4.3 6.3 1.0 C2D I:HEM501 4.3 5.4 1.0 CG I:HIS203 4.4 4.6 1.0 ND1 I:HIS203 4.6 15.0 1.0 NH2 I:ARG104 4.8 14.4 1.0

Iron binding site 4 out of 19 in the Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa within 5.0Å range: probe atom residue distance (Å) B Occ I:Fe502 b:27.8 occ:1.00 FE I:HEM502 0.0 27.8 1.0 NE2 I:HIS188 1.8 15.7 1.0 NA I:HEM502 2.0 11.2 1.0 ND I:HEM502 2.1 5.8 1.0 NC I:HEM502 2.1 6.9 1.0 NB I:HEM502 2.1 9.7 1.0 NE2 I:HIS87 2.5 15.0 1.0 CE1 I:HIS188 2.8 13.3 1.0 CD2 I:HIS188 2.9 14.4 1.0 C4A I:HEM502 3.1 2.7 1.0 C1A I:HEM502 3.1 7.1 1.0 C4C I:HEM502 3.1 3.6 1.0 C1D I:HEM502 3.1 3.3 1.0 C4D I:HEM502 3.1 0.8 1.0 C1B I:HEM502 3.1 7.1 1.0 C1C I:HEM502 3.1 2.3 1.0 C4B I:HEM502 3.1 0.1 1.0 CD2 I:HIS87 3.3 15.6 1.0 CHB I:HEM502 3.4 8.2 1.0 CHA I:HEM502 3.4 3.0 1.0 CHD I:HEM502 3.4 6.4 1.0 CHC I:HEM502 3.5 5.5 1.0 CE1 I:HIS87 3.6 15.5 1.0 ND1 I:HIS188 3.9 23.9 1.0 CG I:HIS188 4.0 22.1 1.0 C2A I:HEM502 4.3 7.4 1.0 C3A I:HEM502 4.3 6.2 1.0 C2D I:HEM502 4.3 6.9 1.0 C3C I:HEM502 4.3 6.3 1.0 C3D I:HEM502 4.3 12.1 1.0 C2C I:HEM502 4.3 5.6 1.0 C2B I:HEM502 4.3 8.0 1.0 C3B I:HEM502 4.3 9.2 1.0 OE2 I:GLU132 4.3 14.8 1.0 CG I:HIS87 4.5 25.4 1.0 ND1 I:HIS87 4.6 18.4 1.0 CA I:GLY136 4.7 5.9 1.0 NE2 I:GLN48 4.9 2.6 1.0

Iron binding site 5 out of 19 in the Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa within 5.0Å range: probe atom residue distance (Å) B Occ J:Fe500 b:25.1 occ:1.00 FE J:HEC500 0.0 25.1 1.0 NE2 J:HIS55 1.9 3.4 1.0 NC J:HEC500 2.0 19.1 1.0 NB J:HEC500 2.1 18.6 1.0 NA J:HEC500 2.1 12.8 1.0 ND J:HEC500 2.1 16.7 1.0 CD2 J:HIS55 2.7 0.0 1.0 SD J:MET150 2.9 13.3 1.0 CE1 J:HIS55 3.0 8.9 1.0 C4C J:HEC500 3.0 7.0 1.0 C1B J:HEC500 3.0 7.2 1.0 C4A J:HEC500 3.1 10.1 1.0 C1D J:HEC500 3.1 10.7 1.0 C1C J:HEC500 3.1 11.2 1.0 C4B J:HEC500 3.1 4.5 1.0 C1A J:HEC500 3.1 4.7 1.0 C4D J:HEC500 3.1 7.7 1.0 CHD J:HEC500 3.4 9.6 1.0 CHB J:HEC500 3.4 7.9 1.0 CHC J:HEC500 3.5 7.6 1.0 CHA J:HEC500 3.5 12.1 1.0 CG J:MET150 3.5 7.2 1.0 CE J:MET150 3.6 13.3 1.0 CG J:HIS55 3.9 5.1 1.0 ND1 J:HIS55 4.0 8.8 1.0 C2B J:HEC500 4.3 9.5 1.0 C3C J:HEC500 4.3 10.5 1.0 C2C J:HEC500 4.3 8.4 1.0 C3B J:HEC500 4.3 11.1 1.0 C3A J:HEC500 4.3 10.8 1.0 C2A J:HEC500 4.3 13.3 1.0 C2D J:HEC500 4.3 10.8 1.0 CB J:MET150 4.3 13.4 1.0 C3D J:HEC500 4.3 7.5 1.0 OH J:TYR126 4.7 13.2 1.0

Iron binding site 6 out of 19 in the Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa within 5.0Å range: probe atom residue distance (Å) B Occ K:Fe501 b:25.0 occ:1.00 FE K:HEC501 0.0 25.0 1.0 NE2 K:HIS134 1.9 8.2 1.0 NA K:HEC501 2.1 10.4 1.0 NC K:HEC501 2.1 20.1 1.0 ND K:HEC501 2.1 11.3 1.0 NB K:HEC501 2.1 7.7 1.0 SD K:MET178 2.8 9.1 1.0 CE1 K:HIS134 2.8 6.6 1.0 CD2 K:HIS134 3.0 3.8 1.0 C1C K:HEC501 3.1 6.0 1.0 C1A K:HEC501 3.1 7.6 1.0 C1D K:HEC501 3.1 7.5 1.0 C4D K:HEC501 3.1 10.3 1.0 C4B K:HEC501 3.1 7.3 1.0 C4C K:HEC501 3.1 5.0 1.0 C4A K:HEC501 3.1 8.0 1.0 C1B K:HEC501 3.1 9.1 1.0 CG K:MET178 3.4 13.1 1.0 CHD K:HEC501 3.4 7.6 1.0 CHA K:HEC501 3.4 10.3 1.0 CHC K:HEC501 3.4 9.9 1.0 CHB K:HEC501 3.5 14.3 1.0 CE K:MET178 3.8 13.1 1.0 ND1 K:HIS134 4.0 3.9 1.0 CG K:HIS134 4.1 6.9 1.0 C2C K:HEC501 4.3 6.5 1.0 C2A K:HEC501 4.3 14.7 1.0 C3C K:HEC501 4.3 12.7 1.0 C3A K:HEC501 4.3 13.8 1.0 C3B K:HEC501 4.3 13.6 1.0 C2D K:HEC501 4.3 9.2 1.0 C3D K:HEC501 4.3 11.4 1.0 C2B K:HEC501 4.3 11.0 1.0 CD1 K:LEU149 4.8 13.1 1.0 CB K:MET178 4.9 10.8 1.0

Iron binding site 7 out of 19 in the Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa within 5.0Å range: probe atom residue distance (Å) B Occ K:Fe502 b:46.3 occ:1.00 FE K:HEC502 0.0 46.3 1.0 NE2 K:HIS38 1.9 28.5 1.0 NC K:HEC502 2.1 29.9 1.0 NA K:HEC502 2.1 26.4 1.0 ND K:HEC502 2.1 25.8 1.0 NB K:HEC502 2.1 23.6 1.0 CE1 K:HIS38 2.8 21.9 1.0 SD K:MET77 2.8 31.7 1.0 CD2 K:HIS38 3.0 28.1 1.0 C1A K:HEC502 3.1 22.8 1.0 C4C K:HEC502 3.1 26.5 1.0 C4D K:HEC502 3.1 22.6 1.0 C1C K:HEC502 3.1 25.1 1.0 C1D K:HEC502 3.1 28.3 1.0 C4A K:HEC502 3.1 22.7 1.0 C4B K:HEC502 3.1 27.2 1.0 C1B K:HEC502 3.1 25.1 1.0 CHA K:HEC502 3.4 23.9 1.0 CHD K:HEC502 3.4 28.5 1.0 CHC K:HEC502 3.5 30.7 1.0 CHB K:HEC502 3.5 26.9 1.0 CG K:MET77 3.6 36.0 1.0 ND1 K:HIS38 3.9 23.6 1.0 CG K:HIS38 4.0 26.1 1.0 C3C K:HEC502 4.3 24.9 1.0 C2A K:HEC502 4.3 22.5 1.0 C2C K:HEC502 4.3 25.2 1.0 C3A K:HEC502 4.3 23.3 1.0 C3D K:HEC502 4.3 25.5 1.0 C2D K:HEC502 4.3 23.6 1.0 C3B K:HEC502 4.3 30.1 1.0 C2B K:HEC502 4.3 28.3 1.0 CE K:MET77 4.4 38.6 1.0

Iron binding site 8 out of 19 in the Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa within 5.0Å range: probe atom residue distance (Å) B Occ Z:Fe201 b:71.7 occ:1.00 FE1 Z:FES201 0.0 71.7 1.0 S2 Z:FES201 2.2 59.9 1.0 S1 Z:FES201 2.2 51.1 1.0 SG Z:CYS152 2.3 53.1 1.0 SG Z:CYS124 2.3 50.1 1.0 FE2 Z:FES201 2.7 62.0 1.0 CB Z:CYS124 2.9 48.1 1.0 CB Z:CYS152 3.2 53.6 1.0 O Z:HIS126 3.2 46.9 1.0 ND1 Z:HIS126 4.0 40.3 1.0 OG Z:SER157 4.0 52.7 1.0 CB Z:SER157 4.1 54.9 1.0 C Z:HIS126 4.3 41.7 1.0 CA Z:CYS124 4.4 48.6 1.0 ND1 Z:HIS155 4.5 45.2 1.0 CB Z:HIS126 4.5 44.9 1.0 CB Z:CYS154 4.6 47.1 1.0 CA Z:CYS152 4.7 54.3 1.0 O Z:CYS129 4.7 48.8 1.0 SG Z:CYS154 4.7 57.1 1.0 N Z:HIS126 4.7 42.8 1.0 CG Z:HIS126 4.7 42.6 1.0 CA Z:HIS126 4.8 42.3 1.0 OH Z:TYR159 4.8 56.0 1.0 C Z:CYS124 4.9 46.2 1.0 N Z:CYS129 4.9 42.4 1.0 N Z:HIS155 4.9 45.2 1.0 CE1 Z:HIS126 5.0 38.9 1.0

Iron binding site 9 out of 19 in the Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 9 of Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa within 5.0Å range: probe atom residue distance (Å) B Occ Z:Fe201 b:62.0 occ:1.00 FE2 Z:FES201 0.0 62.0 1.0 ND1 Z:HIS155 2.1 45.2 1.0 ND1 Z:HIS126 2.2 40.3 1.0 S2 Z:FES201 2.2 59.9 1.0 S1 Z:FES201 2.2 51.1 1.0 CE1 Z:HIS126 2.7 38.9 1.0 FE1 Z:FES201 2.7 71.7 1.0 O Z:HIS126 2.8 46.9 1.0 CE1 Z:HIS155 2.9 41.1 1.0 CG Z:HIS155 3.2 42.6 1.0 CG Z:HIS126 3.4 42.6 1.0 CB Z:HIS155 3.7 42.9 1.0 C Z:HIS126 3.8 41.7 1.0 CB Z:CYS154 3.9 47.1 1.0 NE2 Z:HIS126 3.9 40.3 1.0 NE2 Z:HIS155 4.0 42.5 1.0 N Z:HIS155 4.1 45.2 1.0 CB Z:LEU127 4.1 36.5 1.0 CB Z:HIS126 4.1 44.9 1.0 CD2 Z:HIS155 4.2 42.3 1.0 CD2 Z:HIS126 4.3 40.8 1.0 SG Z:CYS152 4.3 53.1 1.0 CG Z:LEU127 4.4 37.4 1.0 CA Z:HIS155 4.5 44.3 1.0 SG Z:CYS124 4.5 50.1 1.0 CD1 Z:LEU127 4.6 33.5 1.0 CA Z:HIS126 4.6 42.3 1.0 SG Z:CYS154 4.7 57.1 1.0 N Z:LEU127 4.7 34.7 1.0 C Z:CYS154 4.8 48.8 1.0 CB Z:PRO170 4.8 48.6 1.0 OG Z:SER157 4.8 52.7 1.0 CA Z:CYS154 4.9 45.2 1.0 CA Z:LEU127 4.9 38.7 1.0

Iron binding site 10 out of 19 in the Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 10 of Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa within 5.0Å range: probe atom residue distance (Å) B Occ D:Fe501 b:30.1 occ:1.00 FE D:HEM501 0.0 30.1 1.0 NC D:HEM501 2.0 10.1 1.0 NB D:HEM501 2.0 10.6 1.0 ND D:HEM501 2.1 10.9 1.0 NA D:HEM501 2.1 10.8 1.0 NE2 D:HIS203 2.1 4.0 1.0 NE2 D:HIS101 2.7 13.1 1.0 CD2 D:HIS203 2.9 0.0 1.0 CD2 D:HIS101 3.0 4.5 1.0 C4C D:HEM501 3.0 6.3 1.0 C1B D:HEM501 3.0 7.0 1.0 C4A D:HEM501 3.1 4.1 1.0 C1D D:HEM501 3.1 2.7 1.0 C1C D:HEM501 3.1 4.2 1.0 C4D D:HEM501 3.1 5.9 1.0 C4B D:HEM501 3.1 2.3 1.0 C1A D:HEM501 3.1 3.8 1.0 CE1 D:HIS203 3.1 4.8 1.0 CHB D:HEM501 3.4 7.2 1.0 CHD D:HEM501 3.4 8.2 1.0 CHC D:HEM501 3.4 2.1 1.0 CHA D:HEM501 3.5 2.7 1.0 CE1 D:HIS101 3.9 19.3 1.0 CG D:HIS203 4.0 7.3 1.0 ND1 D:HIS203 4.1 12.1 1.0 C3C D:HEM501 4.2 6.0 1.0 C2B D:HEM501 4.3 7.9 1.0 C2C D:HEM501 4.3 7.9 1.0 C3A D:HEM501 4.3 6.9 1.0 C2D D:HEM501 4.3 6.8 1.0 C3D D:HEM501 4.3 11.2 1.0 C3B D:HEM501 4.3 11.4 1.0 C2A D:HEM501 4.3 6.7 1.0 CG D:HIS101 4.3 8.7 1.0 ND1 D:HIS101 4.7 24.4 1.0

J.M.Di Trani, A.A.Gheorghita, M.Turner, P.Brzezinski, P.Adelroth, S.Vahidi, P.L.Howell, J.L.Rubinstein. Structure of the Bc 1 - Cbb 3 Respiratory Supercomplex From Pseudomonas Aeruginosa. Proc.Natl.Acad.Sci.Usa V. 120 93120 2023.
ISSN: ESSN 1091-6490
PubMed: 37751552
DOI: 10.1073/PNAS.2307093120