Iron in PDB 8snh: Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa
Other elements in 8snh:
The structure of Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa also contains other interesting chemical elements:
Iron Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
19;
Binding sites:
The binding sites of Iron atom in the Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa
(pdb code 8snh). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 19 binding sites of Iron where determined in the
Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa, PDB code: 8snh:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 19 in 8snh
Go back to
Iron Binding Sites List in 8snh
Iron binding site 1 out
of 19 in the Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe504
b:76.1
occ:1.00
|
FE
|
E:HEM504
|
0.0
|
76.1
|
1.0
|
|
ND
|
E:HEM504
|
2.0
|
50.1
|
1.0
|
|
NC
|
E:HEM504
|
2.0
|
50.6
|
1.0
|
|
NB
|
E:HEM504
|
2.0
|
48.5
|
1.0
|
|
NA
|
E:HEM504
|
2.1
|
46.7
|
1.0
|
|
NE2
|
E:HIS61
|
2.2
|
61.6
|
1.0
|
|
NE2
|
E:HIS348
|
2.5
|
63.6
|
1.0
|
|
C1D
|
E:HEM504
|
3.1
|
49.6
|
1.0
|
|
C4C
|
E:HEM504
|
3.1
|
46.3
|
1.0
|
|
C4D
|
E:HEM504
|
3.1
|
45.7
|
1.0
|
|
C1C
|
E:HEM504
|
3.1
|
49.9
|
1.0
|
|
C1B
|
E:HEM504
|
3.1
|
51.5
|
1.0
|
|
C4B
|
E:HEM504
|
3.1
|
46.2
|
1.0
|
|
C4A
|
E:HEM504
|
3.1
|
48.1
|
1.0
|
|
C1A
|
E:HEM504
|
3.1
|
49.8
|
1.0
|
|
CE1
|
E:HIS61
|
3.1
|
59.2
|
1.0
|
|
CD2
|
E:HIS61
|
3.3
|
59.8
|
1.0
|
|
CE1
|
E:HIS348
|
3.3
|
64.2
|
1.0
|
|
CD2
|
E:HIS348
|
3.3
|
62.4
|
1.0
|
|
CHD
|
E:HEM504
|
3.4
|
47.0
|
1.0
|
|
CHB
|
E:HEM504
|
3.4
|
49.4
|
1.0
|
|
CHC
|
E:HEM504
|
3.4
|
48.5
|
1.0
|
|
CHA
|
E:HEM504
|
3.4
|
50.0
|
1.0
|
|
C2D
|
E:HEM504
|
4.3
|
48.4
|
1.0
|
|
C3C
|
E:HEM504
|
4.3
|
47.8
|
1.0
|
|
C3D
|
E:HEM504
|
4.3
|
47.5
|
1.0
|
|
C2C
|
E:HEM504
|
4.3
|
50.1
|
1.0
|
|
ND1
|
E:HIS61
|
4.3
|
60.4
|
1.0
|
|
C2B
|
E:HEM504
|
4.3
|
47.3
|
1.0
|
|
ND1
|
E:HIS348
|
4.3
|
62.1
|
1.0
|
|
C3B
|
E:HEM504
|
4.3
|
47.2
|
1.0
|
|
C3A
|
E:HEM504
|
4.3
|
47.5
|
1.0
|
|
C2A
|
E:HEM504
|
4.3
|
48.8
|
1.0
|
|
CG
|
E:HIS348
|
4.3
|
61.5
|
1.0
|
|
CG
|
E:HIS61
|
4.4
|
58.8
|
1.0
|
|
HHD
|
E:HEM504
|
4.4
|
48.6
|
1.0
|
|
HHB
|
E:HEM504
|
4.4
|
48.6
|
1.0
|
|
HHC
|
E:HEM504
|
4.4
|
48.7
|
1.0
|
|
HHA
|
E:HEM504
|
4.4
|
48.9
|
1.0
|
|
OH
|
E:TYR396
|
4.7
|
65.3
|
1.0
|
|
Iron binding site 2 out
of 19 in 8snh
Go back to
Iron Binding Sites List in 8snh
Iron binding site 2 out
of 19 in the Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe505
b:64.8
occ:1.00
|
FE
|
E:HEM505
|
0.0
|
64.8
|
1.0
|
|
NC
|
E:HEM505
|
2.1
|
49.2
|
1.0
|
|
NA
|
E:HEM505
|
2.1
|
49.9
|
1.0
|
|
NB
|
E:HEM505
|
2.1
|
50.7
|
1.0
|
|
ND
|
E:HEM505
|
2.1
|
53.1
|
1.0
|
|
NE2
|
E:HIS346
|
2.1
|
65.7
|
1.0
|
|
CD2
|
E:HIS346
|
2.8
|
63.9
|
1.0
|
|
C4D
|
E:HEM505
|
3.0
|
49.3
|
1.0
|
|
C1D
|
E:HEM505
|
3.0
|
49.8
|
1.0
|
|
C1A
|
E:HEM505
|
3.0
|
48.9
|
1.0
|
|
C4A
|
E:HEM505
|
3.0
|
50.8
|
1.0
|
|
C1B
|
E:HEM505
|
3.1
|
49.8
|
1.0
|
|
C4C
|
E:HEM505
|
3.1
|
51.4
|
1.0
|
|
C4B
|
E:HEM505
|
3.1
|
49.0
|
1.0
|
|
C1C
|
E:HEM505
|
3.1
|
49.9
|
1.0
|
|
CE1
|
E:HIS346
|
3.3
|
66.3
|
1.0
|
|
CHA
|
E:HEM505
|
3.4
|
46.7
|
1.0
|
|
CHD
|
E:HEM505
|
3.4
|
52.4
|
1.0
|
|
CHB
|
E:HEM505
|
3.4
|
50.4
|
1.0
|
|
CHC
|
E:HEM505
|
3.4
|
49.2
|
1.0
|
|
CU
|
E:CU501
|
4.0
|
103.7
|
1.0
|
|
CG
|
E:HIS346
|
4.1
|
62.5
|
1.0
|
|
C3D
|
E:HEM505
|
4.1
|
49.0
|
1.0
|
|
C2D
|
E:HEM505
|
4.1
|
49.9
|
1.0
|
|
C2A
|
E:HEM505
|
4.2
|
49.6
|
1.0
|
|
C3A
|
E:HEM505
|
4.2
|
50.9
|
1.0
|
|
HHA
|
E:HEM505
|
4.3
|
50.0
|
1.0
|
|
C2B
|
E:HEM505
|
4.3
|
48.8
|
1.0
|
|
ND1
|
E:HIS346
|
4.3
|
65.4
|
1.0
|
|
C3B
|
E:HEM505
|
4.3
|
47.2
|
1.0
|
|
C3C
|
E:HEM505
|
4.3
|
48.2
|
1.0
|
|
C2C
|
E:HEM505
|
4.3
|
49.2
|
1.0
|
|
HHC
|
E:HEM505
|
4.4
|
50.3
|
1.0
|
|
HHD
|
E:HEM505
|
4.4
|
50.8
|
1.0
|
|
HHB
|
E:HEM505
|
4.4
|
50.8
|
1.0
|
|
CG2
|
E:VAL211
|
4.9
|
67.4
|
1.0
|
|
Iron binding site 3 out
of 19 in 8snh
Go back to
Iron Binding Sites List in 8snh
Iron binding site 3 out
of 19 in the Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe201
b:139.9
occ:1.00
|
FE1
|
C:FES201
|
0.0
|
139.9
|
1.0
|
|
S2
|
C:FES201
|
2.2
|
125.8
|
1.0
|
|
S1
|
C:FES201
|
2.2
|
136.3
|
1.0
|
|
SG
|
C:CYS152
|
2.3
|
77.2
|
1.0
|
|
SG
|
C:CYS124
|
2.3
|
73.8
|
1.0
|
|
SG
|
C:CYS129
|
2.3
|
84.8
|
1.0
|
|
FE2
|
C:FES201
|
2.7
|
133.1
|
1.0
|
|
HB3
|
C:CYS124
|
2.9
|
62.5
|
1.0
|
|
O
|
C:HIS126
|
3.0
|
66.2
|
1.0
|
|
CB
|
C:CYS124
|
3.1
|
65.7
|
1.0
|
|
HG
|
C:SER157
|
3.3
|
67.2
|
1.0
|
|
HB2
|
C:CYS124
|
3.4
|
62.8
|
1.0
|
|
HB2
|
C:CYS152
|
3.4
|
67.2
|
1.0
|
|
CB
|
C:CYS152
|
3.5
|
67.1
|
1.0
|
|
HB3
|
C:HIS126
|
3.5
|
65.3
|
1.0
|
|
HB2
|
C:SER157
|
3.6
|
67.2
|
1.0
|
|
OG
|
C:SER157
|
3.7
|
68.7
|
1.0
|
|
HB3
|
C:CYS152
|
3.7
|
67.6
|
1.0
|
|
HB2
|
C:CYS154
|
3.8
|
69.3
|
1.0
|
|
HH
|
C:TYR159
|
3.9
|
65.5
|
1.0
|
|
H
|
C:CYS129
|
3.9
|
67.7
|
1.0
|
|
ND1
|
C:HIS126
|
3.9
|
70.4
|
1.0
|
|
H
|
C:HIS155
|
4.1
|
72.8
|
1.0
|
|
CB
|
C:CYS129
|
4.1
|
68.8
|
1.0
|
|
C
|
C:HIS126
|
4.1
|
68.6
|
1.0
|
|
CB
|
C:SER157
|
4.2
|
68.5
|
1.0
|
|
H
|
C:HIS126
|
4.3
|
65.7
|
1.0
|
|
CB
|
C:HIS126
|
4.3
|
63.4
|
1.0
|
|
ND1
|
C:HIS155
|
4.3
|
76.8
|
1.0
|
|
H
|
C:SER157
|
4.4
|
67.1
|
1.0
|
|
HB2
|
C:HIS155
|
4.5
|
73.3
|
1.0
|
|
HB2
|
C:LEU127
|
4.5
|
62.7
|
1.0
|
|
HB3
|
C:CYS129
|
4.5
|
68.3
|
1.0
|
|
HB2
|
C:CYS129
|
4.6
|
68.2
|
1.0
|
|
CA
|
C:CYS124
|
4.6
|
63.9
|
1.0
|
|
H
|
C:CYS154
|
4.6
|
69.2
|
1.0
|
|
OH
|
C:TYR159
|
4.6
|
68.7
|
1.0
|
|
CG
|
C:HIS126
|
4.6
|
66.5
|
1.0
|
|
CA
|
C:HIS126
|
4.6
|
65.9
|
1.0
|
|
N
|
C:CYS129
|
4.7
|
68.6
|
1.0
|
|
N
|
C:HIS126
|
4.7
|
69.0
|
1.0
|
|
CB
|
C:CYS154
|
4.7
|
69.9
|
1.0
|
|
HB3
|
C:SER157
|
4.8
|
67.0
|
1.0
|
|
O
|
C:CYS129
|
4.8
|
66.2
|
1.0
|
|
CA
|
C:CYS152
|
4.8
|
66.7
|
1.0
|
|
N
|
C:HIS155
|
4.8
|
74.2
|
1.0
|
|
HB2
|
C:ALA171
|
4.8
|
60.2
|
1.0
|
|
CA
|
C:CYS129
|
4.9
|
68.3
|
1.0
|
|
C
|
C:CYS124
|
4.9
|
59.1
|
1.0
|
|
HB2
|
C:PRO170
|
4.9
|
62.7
|
1.0
|
|
HA
|
C:CYS152
|
5.0
|
67.0
|
1.0
|
|
Iron binding site 4 out
of 19 in 8snh
Go back to
Iron Binding Sites List in 8snh
Iron binding site 4 out
of 19 in the Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe201
b:133.1
occ:1.00
|
FE2
|
C:FES201
|
0.0
|
133.1
|
1.0
|
|
ND1
|
C:HIS155
|
2.1
|
76.8
|
1.0
|
|
ND1
|
C:HIS126
|
2.2
|
70.4
|
1.0
|
|
S2
|
C:FES201
|
2.2
|
125.8
|
1.0
|
|
S1
|
C:FES201
|
2.2
|
136.3
|
1.0
|
|
O
|
C:HIS126
|
2.7
|
66.2
|
1.0
|
|
FE1
|
C:FES201
|
2.7
|
139.9
|
1.0
|
|
HE1
|
C:HIS126
|
2.8
|
65.9
|
1.0
|
|
CE1
|
C:HIS126
|
2.8
|
68.2
|
1.0
|
|
HB2
|
C:LEU127
|
2.8
|
62.7
|
1.0
|
|
CE1
|
C:HIS155
|
2.8
|
75.8
|
1.0
|
|
HE1
|
C:HIS155
|
2.9
|
73.4
|
1.0
|
|
CG
|
C:HIS155
|
3.2
|
76.0
|
1.0
|
|
HG
|
C:LEU127
|
3.2
|
63.1
|
1.0
|
|
HB2
|
C:HIS155
|
3.3
|
73.3
|
1.0
|
|
CG
|
C:HIS126
|
3.3
|
66.5
|
1.0
|
|
HB2
|
C:CYS154
|
3.4
|
69.3
|
1.0
|
|
SG
|
C:CYS129
|
3.5
|
84.8
|
1.0
|
|
C
|
C:HIS126
|
3.6
|
68.6
|
1.0
|
|
HB3
|
C:HIS126
|
3.7
|
65.3
|
1.0
|
|
CB
|
C:LEU127
|
3.7
|
65.2
|
1.0
|
|
CB
|
C:HIS155
|
3.8
|
74.0
|
1.0
|
|
CG
|
C:LEU127
|
3.9
|
66.0
|
1.0
|
|
CB
|
C:HIS126
|
3.9
|
63.4
|
1.0
|
|
NE2
|
C:HIS126
|
4.0
|
67.2
|
1.0
|
|
NE2
|
C:HIS155
|
4.0
|
74.3
|
1.0
|
|
HD12
|
C:LEU127
|
4.0
|
63.1
|
1.0
|
|
H
|
C:HIS155
|
4.0
|
72.8
|
1.0
|
|
CD2
|
C:HIS155
|
4.2
|
74.1
|
1.0
|
|
CB
|
C:CYS154
|
4.2
|
69.9
|
1.0
|
|
SG
|
C:CYS152
|
4.2
|
77.2
|
1.0
|
|
CD2
|
C:HIS126
|
4.2
|
64.0
|
1.0
|
|
HG
|
C:SER157
|
4.2
|
67.2
|
1.0
|
|
HB3
|
C:CYS154
|
4.3
|
69.7
|
1.0
|
|
HB3
|
C:LEU127
|
4.3
|
62.9
|
1.0
|
|
N
|
C:HIS155
|
4.3
|
74.2
|
1.0
|
|
CA
|
C:HIS126
|
4.4
|
65.9
|
1.0
|
|
HB2
|
C:PRO170
|
4.4
|
62.7
|
1.0
|
|
N
|
C:LEU127
|
4.4
|
66.7
|
1.0
|
|
CD1
|
C:LEU127
|
4.5
|
64.8
|
1.0
|
|
SG
|
C:CYS124
|
4.5
|
73.8
|
1.0
|
|
HB3
|
C:HIS155
|
4.5
|
73.5
|
1.0
|
|
CA
|
C:LEU127
|
4.6
|
63.5
|
1.0
|
|
OG
|
C:SER157
|
4.6
|
68.7
|
1.0
|
|
HE2
|
C:HIS126
|
4.6
|
66.2
|
1.0
|
|
CA
|
C:HIS155
|
4.7
|
73.7
|
1.0
|
|
HE2
|
C:HIS155
|
4.7
|
73.5
|
1.0
|
|
H
|
C:CYS129
|
4.8
|
67.7
|
1.0
|
|
HB3
|
C:CYS129
|
4.8
|
68.3
|
1.0
|
|
HB2
|
C:HIS126
|
4.8
|
65.3
|
1.0
|
|
HD11
|
C:LEU127
|
4.9
|
62.4
|
1.0
|
|
C
|
C:CYS154
|
4.9
|
70.9
|
1.0
|
|
CB
|
C:CYS129
|
5.0
|
68.8
|
1.0
|
|
Iron binding site 5 out
of 19 in 8snh
Go back to
Iron Binding Sites List in 8snh
Iron binding site 5 out
of 19 in the Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
I:Fe502
b:31.2
occ:1.00
|
FE
|
I:HEM502
|
0.0
|
31.2
|
1.0
|
|
NE2
|
I:HIS101
|
2.0
|
11.4
|
1.0
|
|
NB
|
I:HEM502
|
2.0
|
8.6
|
1.0
|
|
NC
|
I:HEM502
|
2.1
|
6.5
|
1.0
|
|
ND
|
I:HEM502
|
2.1
|
1.1
|
1.0
|
|
NA
|
I:HEM502
|
2.1
|
0.7
|
1.0
|
|
NE2
|
I:HIS203
|
2.6
|
3.7
|
1.0
|
|
CD2
|
I:HIS101
|
2.7
|
0.1
|
1.0
|
|
HD2
|
I:HIS101
|
2.9
|
11.4
|
1.0
|
|
CE1
|
I:HIS101
|
3.0
|
8.5
|
1.0
|
|
C1B
|
I:HEM502
|
3.0
|
0.0
|
1.0
|
|
C4A
|
I:HEM502
|
3.0
|
0.8
|
1.0
|
|
C4C
|
I:HEM502
|
3.1
|
1.4
|
1.0
|
|
C1C
|
I:HEM502
|
3.1
|
0.0
|
1.0
|
|
C1A
|
I:HEM502
|
3.1
|
0.0
|
1.0
|
|
C4D
|
I:HEM502
|
3.1
|
0.0
|
1.0
|
|
C4B
|
I:HEM502
|
3.1
|
0.0
|
1.0
|
|
HD2
|
I:HIS203
|
3.1
|
11.7
|
1.0
|
|
C1D
|
I:HEM502
|
3.1
|
0.0
|
1.0
|
|
CD2
|
I:HIS203
|
3.2
|
0.0
|
1.0
|
|
HE1
|
I:HIS101
|
3.4
|
11.6
|
1.0
|
|
CHB
|
I:HEM502
|
3.4
|
3.2
|
1.0
|
|
CHC
|
I:HEM502
|
3.4
|
0.0
|
1.0
|
|
CHA
|
I:HEM502
|
3.4
|
4.0
|
1.0
|
|
CHD
|
I:HEM502
|
3.4
|
4.5
|
1.0
|
|
CE1
|
I:HIS203
|
3.7
|
11.5
|
1.0
|
|
CG
|
I:HIS101
|
3.9
|
0.0
|
1.0
|
|
HE1
|
I:HIS203
|
4.0
|
14.2
|
1.0
|
|
ND1
|
I:HIS101
|
4.0
|
9.4
|
1.0
|
|
C3A
|
I:HEM502
|
4.2
|
3.7
|
1.0
|
|
C2A
|
I:HEM502
|
4.2
|
2.8
|
1.0
|
|
C2B
|
I:HEM502
|
4.3
|
3.8
|
1.0
|
|
C3C
|
I:HEM502
|
4.3
|
1.5
|
1.0
|
|
C2C
|
I:HEM502
|
4.3
|
3.0
|
1.0
|
|
C3B
|
I:HEM502
|
4.3
|
6.2
|
1.0
|
|
C3D
|
I:HEM502
|
4.3
|
1.1
|
1.0
|
|
C2D
|
I:HEM502
|
4.3
|
0.8
|
1.0
|
|
HH22
|
I:ARG104
|
4.3
|
14.5
|
1.0
|
|
HHB
|
I:HEM502
|
4.4
|
10.4
|
1.0
|
|
HA2
|
I:GLY38
|
4.4
|
5.6
|
1.0
|
|
HHA
|
I:HEM502
|
4.4
|
12.1
|
1.0
|
|
CG
|
I:HIS203
|
4.4
|
0.4
|
1.0
|
|
HHC
|
I:HEM502
|
4.4
|
8.6
|
1.0
|
|
HHD
|
I:HEM502
|
4.4
|
10.1
|
1.0
|
|
HH21
|
I:ARG104
|
4.6
|
15.1
|
1.0
|
|
ND1
|
I:HIS203
|
4.6
|
14.5
|
1.0
|
|
HA3
|
I:GLY38
|
4.8
|
5.8
|
1.0
|
|
HD1
|
I:HIS101
|
4.8
|
12.0
|
1.0
|
|
NH2
|
I:ARG104
|
4.8
|
13.6
|
1.0
|
|
HA3
|
I:GLY122
|
4.9
|
9.1
|
1.0
|
|
Iron binding site 6 out
of 19 in 8snh
Go back to
Iron Binding Sites List in 8snh
Iron binding site 6 out
of 19 in the Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
I:Fe503
b:28.4
occ:1.00
|
FE
|
I:HEM503
|
0.0
|
28.4
|
1.0
|
|
NE2
|
I:HIS188
|
1.8
|
13.7
|
1.0
|
|
NA
|
I:HEM503
|
2.0
|
26.3
|
1.0
|
|
ND
|
I:HEM503
|
2.1
|
19.1
|
1.0
|
|
NC
|
I:HEM503
|
2.1
|
21.6
|
1.0
|
|
NB
|
I:HEM503
|
2.1
|
25.0
|
1.0
|
|
NE2
|
I:HIS87
|
2.5
|
12.8
|
1.0
|
|
CE1
|
I:HIS188
|
2.8
|
10.9
|
1.0
|
|
CD2
|
I:HIS188
|
2.9
|
11.3
|
1.0
|
|
HE1
|
I:HIS188
|
2.9
|
32.3
|
1.0
|
|
C4A
|
I:HEM503
|
3.0
|
15.0
|
1.0
|
|
C1A
|
I:HEM503
|
3.1
|
20.9
|
1.0
|
|
C4C
|
I:HEM503
|
3.1
|
15.4
|
1.0
|
|
C1D
|
I:HEM503
|
3.1
|
17.1
|
1.0
|
|
C4D
|
I:HEM503
|
3.1
|
12.8
|
1.0
|
|
C1B
|
I:HEM503
|
3.1
|
21.0
|
1.0
|
|
C1C
|
I:HEM503
|
3.1
|
14.3
|
1.0
|
|
C4B
|
I:HEM503
|
3.1
|
13.1
|
1.0
|
|
HD2
|
I:HIS188
|
3.1
|
33.9
|
1.0
|
|
CD2
|
I:HIS87
|
3.3
|
11.8
|
1.0
|
|
HD2
|
I:HIS87
|
3.3
|
34.0
|
1.0
|
|
CHD
|
I:HEM503
|
3.4
|
20.1
|
1.0
|
|
CHB
|
I:HEM503
|
3.4
|
23.0
|
1.0
|
|
CHA
|
I:HEM503
|
3.4
|
17.1
|
1.0
|
|
CHC
|
I:HEM503
|
3.5
|
18.3
|
1.0
|
|
CE1
|
I:HIS87
|
3.6
|
11.7
|
1.0
|
|
HE1
|
I:HIS87
|
3.8
|
31.9
|
1.0
|
|
ND1
|
I:HIS188
|
3.9
|
19.5
|
1.0
|
|
HA3
|
I:GLY136
|
4.0
|
14.8
|
1.0
|
|
CG
|
I:HIS188
|
4.0
|
17.7
|
1.0
|
|
HD12
|
I:LEU139
|
4.2
|
19.0
|
1.0
|
|
C3A
|
I:HEM503
|
4.3
|
18.9
|
1.0
|
|
C2A
|
I:HEM503
|
4.3
|
20.5
|
1.0
|
|
C2D
|
I:HEM503
|
4.3
|
20.6
|
1.0
|
|
OE2
|
I:GLU132
|
4.3
|
22.9
|
1.0
|
|
C3C
|
I:HEM503
|
4.3
|
19.9
|
1.0
|
|
C3D
|
I:HEM503
|
4.3
|
28.3
|
1.0
|
|
C2C
|
I:HEM503
|
4.3
|
18.3
|
1.0
|
|
C2B
|
I:HEM503
|
4.3
|
21.7
|
1.0
|
|
C3B
|
I:HEM503
|
4.3
|
22.9
|
1.0
|
|
HE21
|
I:GLN48
|
4.4
|
34.9
|
1.0
|
|
HHB
|
I:HEM503
|
4.4
|
33.5
|
1.0
|
|
HHA
|
I:HEM503
|
4.4
|
32.9
|
1.0
|
|
HHD
|
I:HEM503
|
4.4
|
31.9
|
1.0
|
|
HA2
|
I:GLY136
|
4.4
|
15.2
|
1.0
|
|
HHC
|
I:HEM503
|
4.4
|
33.3
|
1.0
|
|
CG
|
I:HIS87
|
4.5
|
22.7
|
1.0
|
|
ND1
|
I:HIS87
|
4.6
|
13.9
|
1.0
|
|
HD1
|
I:HIS188
|
4.7
|
31.1
|
1.0
|
|
CA
|
I:GLY136
|
4.7
|
2.5
|
1.0
|
|
HE22
|
I:GLN48
|
4.8
|
35.5
|
1.0
|
|
HG3
|
I:GLU132
|
4.8
|
23.4
|
1.0
|
|
HA3
|
I:GLY52
|
4.8
|
12.7
|
1.0
|
|
NE2
|
I:GLN48
|
4.9
|
13.3
|
1.0
|
|
Iron binding site 7 out
of 19 in 8snh
Go back to
Iron Binding Sites List in 8snh
Iron binding site 7 out
of 19 in the Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
J:Fe500
b:24.1
occ:1.00
|
FE
|
J:HEC500
|
0.0
|
24.1
|
1.0
|
|
NE2
|
J:HIS55
|
1.9
|
6.5
|
1.0
|
|
NC
|
J:HEC500
|
2.0
|
22.4
|
1.0
|
|
NA
|
J:HEC500
|
2.1
|
13.9
|
1.0
|
|
NB
|
J:HEC500
|
2.1
|
19.9
|
1.0
|
|
ND
|
J:HEC500
|
2.1
|
19.9
|
1.0
|
|
CD2
|
J:HIS55
|
2.7
|
7.0
|
1.0
|
|
HD2
|
J:HIS55
|
2.7
|
32.2
|
1.0
|
|
SD
|
J:MET150
|
2.9
|
9.1
|
1.0
|
|
HG3
|
J:MET150
|
3.0
|
14.7
|
1.0
|
|
C4C
|
J:HEC500
|
3.0
|
3.6
|
1.0
|
|
CE1
|
J:HIS55
|
3.0
|
16.5
|
1.0
|
|
C1B
|
J:HEC500
|
3.0
|
3.9
|
1.0
|
|
C4A
|
J:HEC500
|
3.1
|
9.5
|
1.0
|
|
C1D
|
J:HEC500
|
3.1
|
10.2
|
1.0
|
|
C1C
|
J:HEC500
|
3.1
|
8.4
|
1.0
|
|
C1A
|
J:HEC500
|
3.1
|
0.0
|
1.0
|
|
C4B
|
J:HEC500
|
3.1
|
1.4
|
1.0
|
|
C4D
|
J:HEC500
|
3.1
|
6.7
|
1.0
|
|
HE3
|
J:MET150
|
3.2
|
17.1
|
1.0
|
|
HE1
|
J:HIS55
|
3.4
|
35.5
|
1.0
|
|
CHD
|
J:HEC500
|
3.4
|
7.6
|
1.0
|
|
CHB
|
J:HEC500
|
3.4
|
5.2
|
1.0
|
|
CHC
|
J:HEC500
|
3.5
|
6.7
|
1.0
|
|
CHA
|
J:HEC500
|
3.5
|
10.8
|
1.0
|
|
CG
|
J:MET150
|
3.5
|
1.3
|
1.0
|
|
CE
|
J:MET150
|
3.5
|
12.6
|
1.0
|
|
HE1
|
J:MET150
|
3.7
|
15.8
|
1.0
|
|
CG
|
J:HIS55
|
3.9
|
12.7
|
1.0
|
|
HH
|
J:TYR126
|
3.9
|
17.0
|
1.0
|
|
HB2
|
J:MET150
|
3.9
|
15.5
|
1.0
|
|
ND1
|
J:HIS55
|
4.0
|
16.2
|
1.0
|
|
HD11
|
J:LEU111
|
4.1
|
17.3
|
1.0
|
|
HB3
|
J:PRO108
|
4.2
|
18.3
|
1.0
|
|
HG2
|
J:MET150
|
4.2
|
15.7
|
1.0
|
|
C3C
|
J:HEC500
|
4.3
|
9.2
|
1.0
|
|
C2B
|
J:HEC500
|
4.3
|
8.4
|
1.0
|
|
C2C
|
J:HEC500
|
4.3
|
6.4
|
1.0
|
|
C3A
|
J:HEC500
|
4.3
|
10.4
|
1.0
|
|
C3B
|
J:HEC500
|
4.3
|
9.5
|
1.0
|
|
C2A
|
J:HEC500
|
4.3
|
11.4
|
1.0
|
|
CB
|
J:MET150
|
4.3
|
9.3
|
1.0
|
|
C2D
|
J:HEC500
|
4.3
|
10.3
|
1.0
|
|
C3D
|
J:HEC500
|
4.3
|
5.0
|
1.0
|
|
HHD
|
J:HEC500
|
4.4
|
15.5
|
1.0
|
|
HHB
|
J:HEC500
|
4.4
|
15.0
|
1.0
|
|
HE2
|
J:MET150
|
4.4
|
16.4
|
1.0
|
|
HHC
|
J:HEC500
|
4.4
|
15.7
|
1.0
|
|
HHA
|
J:HEC500
|
4.5
|
17.1
|
1.0
|
|
HE2
|
J:TYR126
|
4.6
|
17.3
|
1.0
|
|
HD21
|
J:LEU111
|
4.7
|
15.7
|
1.0
|
|
OH
|
J:TYR126
|
4.7
|
9.4
|
1.0
|
|
HD1
|
J:HIS55
|
4.8
|
34.3
|
1.0
|
|
HD2
|
J:PRO109
|
4.9
|
14.2
|
1.0
|
|
HB3
|
J:MET150
|
4.9
|
15.5
|
1.0
|
|
HB2
|
J:CYS54
|
4.9
|
16.2
|
1.0
|
|
Iron binding site 8 out
of 19 in 8snh
Go back to
Iron Binding Sites List in 8snh
Iron binding site 8 out
of 19 in the Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
K:Fe501
b:21.7
occ:1.00
|
FE
|
K:HEC501
|
0.0
|
21.7
|
1.0
|
|
NE2
|
K:HIS134
|
1.9
|
2.7
|
1.0
|
|
NC
|
K:HEC501
|
2.1
|
17.3
|
1.0
|
|
NA
|
K:HEC501
|
2.1
|
5.9
|
1.0
|
|
ND
|
K:HEC501
|
2.1
|
7.6
|
1.0
|
|
NB
|
K:HEC501
|
2.1
|
1.2
|
1.0
|
|
SD
|
K:MET178
|
2.8
|
8.5
|
1.0
|
|
CE1
|
K:HIS134
|
2.8
|
0.8
|
1.0
|
|
HE1
|
K:HIS134
|
3.0
|
9.5
|
1.0
|
|
CD2
|
K:HIS134
|
3.0
|
0.0
|
1.0
|
|
C1C
|
K:HEC501
|
3.1
|
0.0
|
1.0
|
|
C1A
|
K:HEC501
|
3.1
|
1.0
|
1.0
|
|
C1D
|
K:HEC501
|
3.1
|
0.8
|
1.0
|
|
C4D
|
K:HEC501
|
3.1
|
3.7
|
1.0
|
|
C4B
|
K:HEC501
|
3.1
|
0.1
|
1.0
|
|
C4C
|
K:HEC501
|
3.1
|
0.0
|
1.0
|
|
C4A
|
K:HEC501
|
3.1
|
1.3
|
1.0
|
|
C1B
|
K:HEC501
|
3.1
|
1.8
|
1.0
|
|
HD2
|
K:HIS134
|
3.3
|
9.2
|
1.0
|
|
HG3
|
K:MET178
|
3.3
|
16.9
|
1.0
|
|
HG2
|
K:MET178
|
3.3
|
14.7
|
1.0
|
|
CG
|
K:MET178
|
3.4
|
9.3
|
1.0
|
|
CHA
|
K:HEC501
|
3.4
|
3.8
|
1.0
|
|
CHD
|
K:HEC501
|
3.4
|
0.0
|
1.0
|
|
CHC
|
K:HEC501
|
3.4
|
4.3
|
1.0
|
|
CHB
|
K:HEC501
|
3.5
|
7.4
|
1.0
|
|
HE2
|
K:MET178
|
3.7
|
15.1
|
1.0
|
|
CE
|
K:MET178
|
3.8
|
9.7
|
1.0
|
|
HD11
|
K:LEU149
|
3.8
|
13.2
|
1.0
|
|
ND1
|
K:HIS134
|
4.0
|
0.0
|
1.0
|
|
HE1
|
K:MET178
|
4.0
|
15.4
|
1.0
|
|
CG
|
K:HIS134
|
4.1
|
1.3
|
1.0
|
|
C2C
|
K:HEC501
|
4.3
|
0.0
|
1.0
|
|
C2A
|
K:HEC501
|
4.3
|
8.2
|
1.0
|
|
C3C
|
K:HEC501
|
4.3
|
6.1
|
1.0
|
|
C3A
|
K:HEC501
|
4.3
|
5.7
|
1.0
|
|
C3B
|
K:HEC501
|
4.3
|
8.3
|
1.0
|
|
C2D
|
K:HEC501
|
4.3
|
1.9
|
1.0
|
|
C3D
|
K:HEC501
|
4.3
|
3.2
|
1.0
|
|
C2B
|
K:HEC501
|
4.3
|
4.6
|
1.0
|
|
HHD
|
K:HEC501
|
4.4
|
9.5
|
1.0
|
|
HHA
|
K:HEC501
|
4.4
|
10.4
|
1.0
|
|
HHC
|
K:HEC501
|
4.4
|
10.0
|
1.0
|
|
HHB
|
K:HEC501
|
4.4
|
10.6
|
1.0
|
|
HD2
|
K:PRO147
|
4.5
|
10.7
|
1.0
|
|
HD13
|
K:ILE181
|
4.6
|
13.8
|
1.0
|
|
HE3
|
K:MET178
|
4.7
|
14.8
|
1.0
|
|
HG2
|
K:PRO147
|
4.7
|
11.8
|
1.0
|
|
HB2
|
K:CYS133
|
4.7
|
10.1
|
1.0
|
|
HD1
|
K:HIS134
|
4.7
|
9.0
|
1.0
|
|
HD21
|
K:LEU149
|
4.7
|
10.5
|
1.0
|
|
CD1
|
K:LEU149
|
4.8
|
10.6
|
1.0
|
|
CB
|
K:MET178
|
4.9
|
6.7
|
1.0
|
|
HG22
|
K:ILE177
|
5.0
|
14.9
|
1.0
|
|
Iron binding site 9 out
of 19 in 8snh
Go back to
Iron Binding Sites List in 8snh
Iron binding site 9 out
of 19 in the Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
K:Fe502
b:46.3
occ:1.00
|
FE
|
K:HEC502
|
0.0
|
46.3
|
1.0
|
|
NE2
|
K:HIS38
|
1.9
|
27.3
|
1.0
|
|
NC
|
K:HEC502
|
2.0
|
30.6
|
1.0
|
|
NA
|
K:HEC502
|
2.1
|
24.6
|
1.0
|
|
ND
|
K:HEC502
|
2.1
|
24.7
|
1.0
|
|
NB
|
K:HEC502
|
2.1
|
22.4
|
1.0
|
|
CE1
|
K:HIS38
|
2.8
|
18.6
|
1.0
|
|
SD
|
K:MET77
|
2.8
|
26.3
|
1.0
|
|
HE1
|
K:HIS38
|
2.9
|
26.7
|
1.0
|
|
CD2
|
K:HIS38
|
3.0
|
26.1
|
1.0
|
|
C4C
|
K:HEC502
|
3.1
|
24.9
|
1.0
|
|
C1A
|
K:HEC502
|
3.1
|
19.2
|
1.0
|
|
C4D
|
K:HEC502
|
3.1
|
21.4
|
1.0
|
|
C1C
|
K:HEC502
|
3.1
|
24.6
|
1.0
|
|
C1D
|
K:HEC502
|
3.1
|
26.4
|
1.0
|
|
C4A
|
K:HEC502
|
3.1
|
20.5
|
1.0
|
|
C4B
|
K:HEC502
|
3.1
|
26.5
|
1.0
|
|
C1B
|
K:HEC502
|
3.1
|
23.9
|
1.0
|
|
HD2
|
K:HIS38
|
3.3
|
28.1
|
1.0
|
|
CHA
|
K:HEC502
|
3.4
|
21.5
|
1.0
|
|
CHD
|
K:HEC502
|
3.4
|
26.8
|
1.0
|
|
CHC
|
K:HEC502
|
3.5
|
30.8
|
1.0
|
|
CHB
|
K:HEC502
|
3.5
|
26.2
|
1.0
|
|
HG2
|
K:MET77
|
3.5
|
33.4
|
1.0
|
|
CG
|
K:MET77
|
3.6
|
31.9
|
1.0
|
|
HG3
|
K:MET77
|
3.6
|
32.2
|
1.0
|
|
ND1
|
K:HIS38
|
3.9
|
19.0
|
1.0
|
|
CG
|
K:HIS38
|
4.0
|
23.7
|
1.0
|
|
HD11
|
K:LEU52
|
4.0
|
24.2
|
1.0
|
|
C3C
|
K:HEC502
|
4.3
|
24.3
|
1.0
|
|
C2A
|
K:HEC502
|
4.3
|
20.9
|
1.0
|
|
C2C
|
K:HEC502
|
4.3
|
25.4
|
1.0
|
|
C3D
|
K:HEC502
|
4.3
|
25.0
|
1.0
|
|
C3A
|
K:HEC502
|
4.3
|
20.9
|
1.0
|
|
C2D
|
K:HEC502
|
4.3
|
21.8
|
1.0
|
|
C3B
|
K:HEC502
|
4.3
|
30.5
|
1.0
|
|
C2B
|
K:HEC502
|
4.3
|
28.1
|
1.0
|
|
HHA
|
K:HEC502
|
4.4
|
28.5
|
1.0
|
|
HHD
|
K:HEC502
|
4.4
|
29.9
|
1.0
|
|
HHC
|
K:HEC502
|
4.4
|
31.7
|
1.0
|
|
CE
|
K:MET77
|
4.4
|
36.0
|
1.0
|
|
HHB
|
K:HEC502
|
4.5
|
30.1
|
1.0
|
|
HG11
|
K:VAL74
|
4.5
|
29.0
|
1.0
|
|
HE1
|
K:MET77
|
4.6
|
33.4
|
1.0
|
|
HD1
|
K:HIS38
|
4.7
|
27.6
|
1.0
|
|
HD21
|
K:LEU52
|
4.7
|
23.9
|
1.0
|
|
HB2
|
K:CYS37
|
4.7
|
32.7
|
1.0
|
|
HD2
|
K:PRO50
|
4.8
|
20.4
|
1.0
|
|
HG2
|
K:PRO50
|
4.9
|
19.9
|
1.0
|
|
HE3
|
K:MET77
|
4.9
|
33.3
|
1.0
|
|
HE2
|
K:MET77
|
5.0
|
33.4
|
1.0
|
|
Iron binding site 10 out
of 19 in 8snh
Go back to
Iron Binding Sites List in 8snh
Iron binding site 10 out
of 19 in the Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of Cytochrome BC1-CBB3 Supercomplex From Pseudomonas Aeruginosa within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
Z:Fe201
b:77.4
occ:1.00
|
FE1
|
Z:FES201
|
0.0
|
77.4
|
1.0
|
|
S2
|
Z:FES201
|
2.2
|
70.6
|
1.0
|
|
S1
|
Z:FES201
|
2.2
|
55.8
|
1.0
|
|
SG
|
Z:CYS152
|
2.3
|
46.6
|
1.0
|
|
SG
|
Z:CYS124
|
2.3
|
43.7
|
1.0
|
|
FE2
|
Z:FES201
|
2.7
|
71.6
|
1.0
|
|
HB3
|
Z:CYS124
|
2.9
|
41.2
|
1.0
|
|
CB
|
Z:CYS124
|
3.1
|
42.2
|
1.0
|
|
O
|
Z:HIS126
|
3.1
|
46.0
|
1.0
|
|
HB2
|
Z:CYS124
|
3.2
|
41.2
|
1.0
|
|
CB
|
Z:CYS152
|
3.4
|
45.1
|
1.0
|
|
HG
|
Z:SER157
|
3.4
|
44.5
|
1.0
|
|
HB3
|
Z:CYS152
|
3.5
|
45.4
|
1.0
|
|
HB2
|
Z:CYS152
|
3.6
|
45.1
|
1.0
|
|
HB2
|
Z:SER157
|
3.6
|
45.1
|
1.0
|
|
SG
|
Z:CYS129
|
3.7
|
63.4
|
1.0
|
|
HG
|
Z:CYS129
|
3.9
|
45.1
|
1.0
|
|
HB2
|
Z:CYS154
|
3.9
|
44.7
|
1.0
|
|
ND1
|
Z:HIS126
|
3.9
|
35.8
|
1.0
|
|
OG
|
Z:SER157
|
3.9
|
45.4
|
1.0
|
|
HB3
|
Z:HIS126
|
3.9
|
38.7
|
1.0
|
|
H
|
Z:HIS126
|
4.1
|
39.3
|
1.0
|
|
H
|
Z:HIS155
|
4.1
|
41.2
|
1.0
|
|
H
|
Z:CYS129
|
4.2
|
43.7
|
1.0
|
|
C
|
Z:HIS126
|
4.2
|
37.1
|
1.0
|
|
CB
|
Z:SER157
|
4.3
|
47.1
|
1.0
|
|
HH
|
Z:TYR159
|
4.3
|
46.0
|
1.0
|
|
H
|
Z:SER157
|
4.3
|
44.6
|
1.0
|
|
ND1
|
Z:HIS155
|
4.4
|
45.5
|
1.0
|
|
CA
|
Z:CYS124
|
4.5
|
41.3
|
1.0
|
|
CB
|
Z:HIS126
|
4.6
|
40.0
|
1.0
|
|
HB2
|
Z:LEU127
|
4.6
|
35.2
|
1.0
|
|
HB2
|
Z:HIS155
|
4.6
|
41.3
|
1.0
|
|
H
|
Z:GLY128
|
4.6
|
39.3
|
1.0
|
|
HB2
|
Z:ALA171
|
4.6
|
40.9
|
1.0
|
|
H
|
Z:CYS154
|
4.7
|
44.1
|
1.0
|
|
CG
|
Z:HIS126
|
4.7
|
39.7
|
1.0
|
|
N
|
Z:HIS126
|
4.8
|
36.8
|
1.0
|
|
CA
|
Z:HIS126
|
4.8
|
36.5
|
1.0
|
|
CB
|
Z:CYS154
|
4.8
|
45.1
|
1.0
|
|
CA
|
Z:CYS152
|
4.8
|
44.4
|
1.0
|
|
HB3
|
Z:SER157
|
4.8
|
44.7
|
1.0
|
|
HB2
|
Z:PRO170
|
4.9
|
41.5
|
1.0
|
|
CE1
|
Z:HIS126
|
4.9
|
34.8
|
1.0
|
|
N
|
Z:HIS155
|
4.9
|
42.6
|
1.0
|
|
HA
|
Z:CYS124
|
4.9
|
41.5
|
1.0
|
|
HE1
|
Z:HIS126
|
5.0
|
38.0
|
1.0
|
|
C
|
Z:CYS124
|
5.0
|
38.1
|
1.0
|
|
N
|
Z:CYS129
|
5.0
|
41.5
|
1.0
|
|
HA
|
Z:CYS152
|
5.0
|
45.0
|
1.0
|
|
Reference:
J.M.Di Trani,
A.A.Gheorghita,
M.Turner,
P.Brzezinski,
P.Adelroth,
S.Vahidi,
P.L.Howell,
J.L.Rubinstein.
Structure of the Bc 1 - Cbb 3 Respiratory Supercomplex From Pseudomonas Aeruginosa. Proc.Natl.Acad.Sci.Usa V. 120 93120 2023.
ISSN: ESSN 1091-6490
PubMed: 37751552
DOI: 10.1073/PNAS.2307093120
Page generated: Sat Aug 10 17:55:50 2024
|
