Iron in PDB 8t4q: 2.07 Angstrom Cryoem Structure of Heavy Chain Apoferritin From Mus Musculus From 200KV Microscope

Iron Binding Sites:

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>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 24;

Binding sites:

The binding sites of Iron atom in the 2.07 Angstrom Cryoem Structure of Heavy Chain Apoferritin From Mus Musculus From 200KV Microscope (pdb code 8t4q). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 24 binding sites of Iron where determined in the 2.07 Angstrom Cryoem Structure of Heavy Chain Apoferritin From Mus Musculus From 200KV Microscope, PDB code: 8t4q:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iron binding site 1 out of 24 in 8t4q

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Iron binding site 1 out of 24 in the 2.07 Angstrom Cryoem Structure of Heavy Chain Apoferritin From Mus Musculus From 200KV Microscope


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of 2.07 Angstrom Cryoem Structure of Heavy Chain Apoferritin From Mus Musculus From 200KV Microscope within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:1.0
occ:1.00
 ND1 A:HIS65 1.9 1.0 0.5
OE2 A:GLU27 2.0 6.3 1.0
OE2 A:GLU62 2.5 117.3 1.0
CE1 A:HIS65 2.8 1.0 0.5
OE1 A:GLU62 2.9 87.3 1.0
CD A:GLU27 3.1 1.0 1.0
CG A:HIS65 3.2 1.0 0.5
CD A:GLU62 3.3 1.0 1.0
OE1 A:GLU27 3.4 174.3 1.0
OE1 A:GLN141 3.5 1.0 1.0
CB A:HIS65 3.8 1.0 0.5
NE2 A:HIS65 4.0 1.0 0.5
CD2 A:HIS65 4.2 9.3 0.5
CG1 A:VAL110 4.4 1.0 1.0
O A:HOH361 4.4 1.0 1.0
CG A:GLU27 4.5 1.0 1.0
CD A:GLN141 4.5 1.0 1.0
CG A:GLU62 4.7 1.0 1.0
CD1 A:TYR137 4.9 1.0 1.0

Iron binding site 2 out of 24 in 8t4q

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Iron binding site 2 out of 24 in the 2.07 Angstrom Cryoem Structure of Heavy Chain Apoferritin From Mus Musculus From 200KV Microscope


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of 2.07 Angstrom Cryoem Structure of Heavy Chain Apoferritin From Mus Musculus From 200KV Microscope within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe201

b:1.0
occ:1.00
 ND1 B:HIS65 1.9 1.0 0.5
OE2 B:GLU27 2.0 6.3 1.0
OE2 B:GLU62 2.5 117.3 1.0
CE1 B:HIS65 2.8 1.0 0.5
OE1 B:GLU62 2.9 87.3 1.0
CD B:GLU27 3.1 1.0 1.0
CG B:HIS65 3.2 1.0 0.5
CD B:GLU62 3.3 1.0 1.0
OE1 B:GLU27 3.4 174.3 1.0
OE1 B:GLN141 3.5 1.0 1.0
CB B:HIS65 3.8 1.0 0.5
NE2 B:HIS65 4.0 1.0 0.5
CD2 B:HIS65 4.2 9.3 0.5
CG1 B:VAL110 4.4 1.0 1.0
O B:HOH361 4.4 1.0 1.0
CG B:GLU27 4.5 1.0 1.0
CD B:GLN141 4.5 1.0 1.0
CG B:GLU62 4.7 1.0 1.0
CD1 B:TYR137 4.9 1.0 1.0

Iron binding site 3 out of 24 in 8t4q

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Iron binding site 3 out of 24 in the 2.07 Angstrom Cryoem Structure of Heavy Chain Apoferritin From Mus Musculus From 200KV Microscope


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of 2.07 Angstrom Cryoem Structure of Heavy Chain Apoferritin From Mus Musculus From 200KV Microscope within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe201

b:1.0
occ:1.00
 ND1 C:HIS65 1.9 1.0 0.5
OE2 C:GLU27 2.0 6.3 1.0
OE2 C:GLU62 2.5 117.3 1.0
CE1 C:HIS65 2.8 1.0 0.5
OE1 C:GLU62 2.9 87.3 1.0
CD C:GLU27 3.1 1.0 1.0
CG C:HIS65 3.2 1.0 0.5
CD C:GLU62 3.3 1.0 1.0
OE1 C:GLU27 3.4 174.3 1.0
OE1 C:GLN141 3.5 1.0 1.0
CB C:HIS65 3.8 1.0 0.5
NE2 C:HIS65 4.0 1.0 0.5
CD2 C:HIS65 4.2 9.3 0.5
CG1 C:VAL110 4.4 1.0 1.0
O C:HOH361 4.4 1.0 1.0
CG C:GLU27 4.5 1.0 1.0
CD C:GLN141 4.5 1.0 1.0
CG C:GLU62 4.7 1.0 1.0
CD1 C:TYR137 4.9 1.0 1.0

Iron binding site 4 out of 24 in 8t4q

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Iron binding site 4 out of 24 in the 2.07 Angstrom Cryoem Structure of Heavy Chain Apoferritin From Mus Musculus From 200KV Microscope


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of 2.07 Angstrom Cryoem Structure of Heavy Chain Apoferritin From Mus Musculus From 200KV Microscope within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Fe201

b:1.0
occ:1.00
 ND1 D:HIS65 1.9 1.0 0.5
OE2 D:GLU27 2.0 6.3 1.0
OE2 D:GLU62 2.5 117.3 1.0
CE1 D:HIS65 2.8 1.0 0.5
OE1 D:GLU62 2.9 87.3 1.0
CD D:GLU27 3.1 1.0 1.0
CG D:HIS65 3.2 1.0 0.5
CD D:GLU62 3.3 1.0 1.0
OE1 D:GLU27 3.4 174.3 1.0
OE1 D:GLN141 3.5 1.0 1.0
CB D:HIS65 3.8 1.0 0.5
NE2 D:HIS65 4.0 1.0 0.5
CD2 D:HIS65 4.2 9.3 0.5
CG1 D:VAL110 4.4 1.0 1.0
O D:HOH361 4.4 1.0 1.0
CG D:GLU27 4.5 1.0 1.0
CD D:GLN141 4.5 1.0 1.0
CG D:GLU62 4.7 1.0 1.0
CD1 D:TYR137 4.9 1.0 1.0

Iron binding site 5 out of 24 in 8t4q

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Iron binding site 5 out of 24 in the 2.07 Angstrom Cryoem Structure of Heavy Chain Apoferritin From Mus Musculus From 200KV Microscope


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of 2.07 Angstrom Cryoem Structure of Heavy Chain Apoferritin From Mus Musculus From 200KV Microscope within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Fe201

b:1.0
occ:1.00
 ND1 E:HIS65 1.9 1.0 0.5
OE2 E:GLU27 2.0 6.3 1.0
OE2 E:GLU62 2.5 117.3 1.0
CE1 E:HIS65 2.8 1.0 0.5
OE1 E:GLU62 2.9 87.3 1.0
CD E:GLU27 3.1 1.0 1.0
CG E:HIS65 3.2 1.0 0.5
CD E:GLU62 3.3 1.0 1.0
OE1 E:GLU27 3.4 174.3 1.0
OE1 E:GLN141 3.5 1.0 1.0
CB E:HIS65 3.8 1.0 0.5
NE2 E:HIS65 4.0 1.0 0.5
CD2 E:HIS65 4.2 9.3 0.5
CG1 E:VAL110 4.4 1.0 1.0
O E:HOH359 4.4 1.0 1.0
CG E:GLU27 4.5 1.0 1.0
CD E:GLN141 4.5 1.0 1.0
CG E:GLU62 4.7 1.0 1.0
CD1 E:TYR137 4.9 1.0 1.0

Iron binding site 6 out of 24 in 8t4q

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Iron binding site 6 out of 24 in the 2.07 Angstrom Cryoem Structure of Heavy Chain Apoferritin From Mus Musculus From 200KV Microscope


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of 2.07 Angstrom Cryoem Structure of Heavy Chain Apoferritin From Mus Musculus From 200KV Microscope within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Fe201

b:1.0
occ:1.00
 ND1 F:HIS65 1.9 1.0 0.5
OE2 F:GLU27 2.0 6.3 1.0
OE2 F:GLU62 2.5 117.3 1.0
CE1 F:HIS65 2.8 1.0 0.5
OE1 F:GLU62 2.9 87.3 1.0
CD F:GLU27 3.1 1.0 1.0
CG F:HIS65 3.2 1.0 0.5
CD F:GLU62 3.3 1.0 1.0
OE1 F:GLU27 3.4 174.3 1.0
OE1 F:GLN141 3.5 1.0 1.0
CB F:HIS65 3.8 1.0 0.5
NE2 F:HIS65 4.0 1.0 0.5
CD2 F:HIS65 4.2 9.3 0.5
CG1 F:VAL110 4.4 1.0 1.0
O F:HOH361 4.4 1.0 1.0
CG F:GLU27 4.5 1.0 1.0
CD F:GLN141 4.5 1.0 1.0
CG F:GLU62 4.7 1.0 1.0
CD1 F:TYR137 4.9 1.0 1.0

Iron binding site 7 out of 24 in 8t4q

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Iron binding site 7 out of 24 in the 2.07 Angstrom Cryoem Structure of Heavy Chain Apoferritin From Mus Musculus From 200KV Microscope


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of 2.07 Angstrom Cryoem Structure of Heavy Chain Apoferritin From Mus Musculus From 200KV Microscope within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Fe201

b:1.0
occ:1.00
 ND1 G:HIS65 1.9 1.0 0.5
OE2 G:GLU27 2.0 6.3 1.0
OE2 G:GLU62 2.5 117.3 1.0
CE1 G:HIS65 2.8 1.0 0.5
OE1 G:GLU62 2.9 87.3 1.0
CD G:GLU27 3.1 1.0 1.0
CG G:HIS65 3.2 1.0 0.5
CD G:GLU62 3.3 1.0 1.0
OE1 G:GLU27 3.4 174.3 1.0
OE1 G:GLN141 3.5 1.0 1.0
CB G:HIS65 3.8 1.0 0.5
NE2 G:HIS65 4.0 1.0 0.5
CD2 G:HIS65 4.2 9.3 0.5
CG1 G:VAL110 4.4 1.0 1.0
O G:HOH361 4.4 1.0 1.0
CG G:GLU27 4.5 1.0 1.0
CD G:GLN141 4.5 1.0 1.0
CG G:GLU62 4.7 1.0 1.0
CD1 G:TYR137 4.9 1.0 1.0

Iron binding site 8 out of 24 in 8t4q

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Iron binding site 8 out of 24 in the 2.07 Angstrom Cryoem Structure of Heavy Chain Apoferritin From Mus Musculus From 200KV Microscope


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of 2.07 Angstrom Cryoem Structure of Heavy Chain Apoferritin From Mus Musculus From 200KV Microscope within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Fe201

b:1.0
occ:1.00
 ND1 H:HIS65 1.9 1.0 0.5
OE2 H:GLU27 2.0 6.3 1.0
OE2 H:GLU62 2.5 117.3 1.0
CE1 H:HIS65 2.8 1.0 0.5
OE1 H:GLU62 2.9 87.3 1.0
CD H:GLU27 3.1 1.0 1.0
CG H:HIS65 3.2 1.0 0.5
CD H:GLU62 3.3 1.0 1.0
OE1 H:GLU27 3.4 174.3 1.0
OE1 H:GLN141 3.5 1.0 1.0
CB H:HIS65 3.8 1.0 0.5
NE2 H:HIS65 4.0 1.0 0.5
CD2 H:HIS65 4.2 9.3 0.5
CG1 H:VAL110 4.4 1.0 1.0
O H:HOH360 4.4 1.0 1.0
CG H:GLU27 4.5 1.0 1.0
CD H:GLN141 4.5 1.0 1.0
CG H:GLU62 4.7 1.0 1.0
CD1 H:TYR137 4.9 1.0 1.0

Iron binding site 9 out of 24 in 8t4q

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Iron binding site 9 out of 24 in the 2.07 Angstrom Cryoem Structure of Heavy Chain Apoferritin From Mus Musculus From 200KV Microscope


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 9 of 2.07 Angstrom Cryoem Structure of Heavy Chain Apoferritin From Mus Musculus From 200KV Microscope within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Fe201

b:1.0
occ:1.00
 ND1 I:HIS65 1.9 1.0 0.5
OE2 I:GLU27 2.0 6.3 1.0
OE2 I:GLU62 2.5 117.3 1.0
CE1 I:HIS65 2.8 1.0 0.5
OE1 I:GLU62 2.9 87.3 1.0
CD I:GLU27 3.1 1.0 1.0
CG I:HIS65 3.2 1.0 0.5
CD I:GLU62 3.3 1.0 1.0
OE1 I:GLU27 3.4 174.3 1.0
OE1 I:GLN141 3.5 1.0 1.0
CB I:HIS65 3.8 1.0 0.5
NE2 I:HIS65 4.0 1.0 0.5
CD2 I:HIS65 4.2 9.3 0.5
CG1 I:VAL110 4.4 1.0 1.0
O I:HOH359 4.4 1.0 1.0
CG I:GLU27 4.5 1.0 1.0
CD I:GLN141 4.5 1.0 1.0
CG I:GLU62 4.7 1.0 1.0
CD1 I:TYR137 4.9 1.0 1.0

Iron binding site 10 out of 24 in 8t4q

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Iron binding site 10 out of 24 in the 2.07 Angstrom Cryoem Structure of Heavy Chain Apoferritin From Mus Musculus From 200KV Microscope


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 10 of 2.07 Angstrom Cryoem Structure of Heavy Chain Apoferritin From Mus Musculus From 200KV Microscope within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Fe201

b:1.0
occ:1.00
 ND1 J:HIS65 1.9 1.0 0.5
OE2 J:GLU27 2.0 6.3 1.0
OE2 J:GLU62 2.5 117.3 1.0
CE1 J:HIS65 2.8 1.0 0.5
OE1 J:GLU62 2.9 87.3 1.0
CD J:GLU27 3.1 1.0 1.0
CG J:HIS65 3.2 1.0 0.5
CD J:GLU62 3.3 1.0 1.0
OE1 J:GLU27 3.4 174.3 1.0
OE1 J:GLN141 3.5 1.0 1.0
CB J:HIS65 3.8 1.0 0.5
NE2 J:HIS65 4.0 1.0 0.5
CD2 J:HIS65 4.2 9.3 0.5
CG1 J:VAL110 4.4 1.0 1.0
O J:HOH361 4.4 1.0 1.0
CG J:GLU27 4.5 1.0 1.0
CD J:GLN141 4.5 1.0 1.0
CG J:GLU62 4.7 1.0 1.0
CD1 J:TYR137 4.9 1.0 1.0

Reference:

Y.Liu, G.Pintilie, W.Chiu. 2.07 Angstrom Cryoem Structure of Heavy Chain Apoferritin From Mus Musculus From 200KV Microscope To Be Published.
Page generated: Sat Sep 28 21:46:07 2024

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