Iron in PDB 8tdv: Ssrna Bound SAMHD1 T Closed

The binding sites of Iron atom in the Ssrna Bound SAMHD1 T Closed (pdb code 8tdv). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Ssrna Bound SAMHD1 T Closed, PDB code: 8tdv:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Ssrna Bound SAMHD1 T Closed


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Ssrna Bound SAMHD1 T Closed within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe701 b:48.4 occ:1.00 OD2 A:ASP207 2.0 39.9 1.0 OD1 A:ASP311 2.0 38.2 1.0 NE2 A:HIS167 2.2 27.3 1.0 NE2 A:HIS206 2.3 26.8 1.0 CE1 A:HIS167 2.8 26.6 1.0 CG A:ASP311 3.1 40.3 1.0 CD2 A:HIS206 3.1 29.9 1.0 CG A:ASP207 3.1 38.9 1.0 CE1 A:HIS206 3.3 28.0 1.0 CD2 A:HIS167 3.4 30.5 1.0 OD2 A:ASP311 3.5 50.1 1.0 OD1 A:ASP207 3.6 43.2 1.0 NH1 A:ARG164 3.8 32.0 1.0 ND1 A:HIS167 4.0 24.7 1.0 CG A:HIS206 4.3 23.8 1.0 CB A:ASP311 4.3 36.5 1.0 CG A:HIS167 4.3 24.2 1.0 ND1 A:HIS206 4.4 20.8 1.0 CB A:ASP207 4.4 37.2 1.0 CG2 A:VAL171 4.8 27.3 1.0 CD2 A:TYR315 4.9 39.3 1.0

Iron binding site 2 out of 2 in the Ssrna Bound SAMHD1 T Closed


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Ssrna Bound SAMHD1 T Closed within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe701 b:40.0 occ:1.00 OD1 B:ASP311 2.0 38.8 1.0 OD2 B:ASP207 2.1 30.5 1.0 NE2 B:HIS167 2.1 27.1 1.0 NE2 B:HIS206 2.3 21.4 1.0 CG B:ASP311 3.0 38.5 1.0 CE1 B:HIS167 3.1 28.0 1.0 CD2 B:HIS206 3.1 20.4 1.0 CD2 B:HIS167 3.1 26.0 1.0 CG B:ASP207 3.1 33.0 1.0 CE1 B:HIS206 3.4 20.1 1.0 OD2 B:ASP311 3.4 42.4 1.0 OD1 B:ASP207 3.5 35.4 1.0 NH1 B:ARG164 3.6 26.7 1.0 ND1 B:HIS167 4.2 27.3 1.0 CG B:HIS167 4.2 22.4 1.0 CG B:HIS206 4.3 13.3 1.0 CB B:ASP311 4.4 30.8 1.0 ND1 B:HIS206 4.4 13.6 1.0 CB B:ASP207 4.4 26.2 1.0 CZ B:ARG164 4.8 31.0 1.0 CD2 B:TYR315 4.9 32.6 1.0

B.Orris, M.W.Sung, S.Bhat, Y.Xu, K.W.Huynh, S.Han, D.C.Johnson, B.Bosbach, D.J.Shields, J.T.Stivers. Guanine-Containing Ssdna and Rna Induce Dimeric and Tetrameric Structural Forms of SAMHD1. Nucleic Acids Res. V. 51 12443 2023.
ISSN: ESSN 1362-4962
PubMed: 37930833
DOI: 10.1093/NAR/GKAD971