Iron in PDB 8tdw: Ssrna Bound SAMHD1 T Open

The binding sites of Iron atom in the Ssrna Bound SAMHD1 T Open (pdb code 8tdw). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Ssrna Bound SAMHD1 T Open, PDB code: 8tdw:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Ssrna Bound SAMHD1 T Open


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Ssrna Bound SAMHD1 T Open within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe701 b:30.0 occ:1.00 NH1 A:ARG164 3.2 98.8 1.0 CD2 A:TYR315 3.8 97.8 1.0 NE2 A:HIS167 3.8 98.8 1.0 OD2 A:ASP207 3.8 98.7 1.0 CE2 A:TYR315 4.0 97.8 1.0 CZ A:ARG164 4.1 98.8 1.0 CE1 A:HIS167 4.2 98.8 1.0 NE2 A:HIS215 4.2 98.0 1.0 CG A:TYR315 4.4 97.8 1.0 NH2 A:ARG164 4.4 98.8 1.0 NE2 A:HIS206 4.4 98.7 1.0 OD1 A:ASP207 4.5 98.7 1.0 CD2 A:HIS167 4.6 98.8 1.0 CG A:ASP207 4.6 98.7 1.0 CB A:TYR315 4.8 97.8 1.0 CZ A:TYR315 4.8 97.8 1.0 CE1 A:HIS215 4.9 98.0 1.0 NE2 A:HIS210 5.0 98.8 1.0

Iron binding site 2 out of 2 in the Ssrna Bound SAMHD1 T Open


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Ssrna Bound SAMHD1 T Open within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe701 b:30.0 occ:1.00 OD2 B:ASP207 2.3 98.7 1.0 NE2 B:HIS167 2.3 98.8 1.0 NE2 B:HIS206 2.4 98.7 1.0 CD2 B:HIS206 2.9 98.7 1.0 CE1 B:HIS167 3.2 98.8 1.0 CG B:ASP207 3.4 98.7 1.0 CD2 B:HIS167 3.4 98.8 1.0 CE1 B:HIS206 3.6 98.7 1.0 OD1 B:ASP207 3.9 98.7 1.0 NH1 B:ARG164 3.9 98.8 1.0 CB B:ASP311 4.2 98.6 1.0 CG B:HIS206 4.2 98.7 1.0 ND1 B:HIS167 4.4 98.8 1.0 CG B:HIS167 4.5 98.8 1.0 ND1 B:HIS206 4.5 98.7 1.0 CB B:ASP207 4.5 98.7 1.0 CD2 B:TYR315 4.5 97.8 1.0 CE2 B:TYR315 5.0 97.8 1.0 CG2 B:VAL171 5.0 98.9 1.0

B.Orris, M.W.Sung, S.Bhat, Y.Xu, K.W.Huynh, S.Han, D.C.Johnson, B.Bosbach, D.J.Shields, J.T.Stivers. Guanine-Containing Ssdna and Rna Induce Dimeric and Tetrameric Structural Forms of SAMHD1. Nucleic Acids Res. 2023.
ISSN: ESSN 1362-4962
PubMed: 37930833
DOI: 10.1093/NAR/GKAD971