Iron in PDB 8tow: Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex

Other elements in 8tow:

The structure of Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex also contains other interesting chemical elements:

Manganese (Mn) 8 atoms
Magnesium (Mg) 70 atoms
Calcium (Ca) 8 atoms
Chlorine (Cl) 4 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex (pdb code 8tow). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 6 binding sites of Iron where determined in the Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex, PDB code: 8tow:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6;

Iron binding site 1 out of 6 in 8tow

Go back to Iron Binding Sites List in 8tow
Iron binding site 1 out of 6 in the Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe402

b:15.2
occ:1.00
 NE2 D:HIS214 2.2 3.8 1.0
NE2 A:HIS215 2.2 3.6 1.0
NE2 A:HIS272 2.3 5.1 1.0
NE2 D:HIS268 2.4 2.5 1.0
O3 A:BCT417 2.8 8.7 1.0
O1 A:BCT417 2.9 8.7 1.0
CD2 A:HIS215 3.0 3.6 1.0
CD2 D:HIS214 3.1 3.8 1.0
C A:BCT417 3.2 8.7 1.0
CE1 A:HIS272 3.2 5.1 1.0
CE1 D:HIS214 3.2 3.8 1.0
CD2 D:HIS268 3.3 2.5 1.0
CE1 A:HIS215 3.3 3.6 1.0
CE1 D:HIS268 3.3 2.5 1.0
CD2 A:HIS272 3.4 5.1 1.0
CG A:HIS215 4.2 3.6 1.0
O2 A:BCT417 4.3 8.7 1.0
ND1 D:HIS214 4.3 3.8 1.0
CG D:HIS214 4.3 3.8 1.0
ND1 A:HIS215 4.3 3.6 1.0
ND1 A:HIS272 4.3 5.1 1.0
ND1 D:HIS268 4.5 2.5 1.0
CG A:HIS272 4.5 5.1 1.0
CG D:HIS268 4.5 2.5 1.0
OH D:TYR244 4.8 4.1 1.0
CG2 D:VAL218 4.8 3.8 1.0
CG2 A:VAL219 4.8 4.2 1.0
OH A:TYR246 4.9 7.3 1.0
CD2 D:LEU267 5.0 2.5 1.0

Iron binding site 2 out of 6 in 8tow

Go back to Iron Binding Sites List in 8tow
Iron binding site 2 out of 6 in the Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Fe104

b:20.4
occ:1.00
 FE E:HEM104 0.0 20.4 1.0
ND E:HEM104 1.9 20.4 1.0
NA E:HEM104 2.0 20.4 1.0
NC E:HEM104 2.1 20.4 1.0
NB E:HEM104 2.1 20.4 1.0
NE2 E:HIS23 2.2 21.7 1.0
NE2 F:HIS23 2.3 19.1 1.0
C4D E:HEM104 2.9 20.4 1.0
C1D E:HEM104 2.9 20.4 1.0
C1A E:HEM104 2.9 20.4 1.0
C4A E:HEM104 3.0 20.4 1.0
CE1 F:HIS23 3.0 19.1 1.0
C4C E:HEM104 3.0 20.4 1.0
CE1 E:HIS23 3.0 21.7 1.0
C1B E:HEM104 3.1 20.4 1.0
C4B E:HEM104 3.1 20.4 1.0
C1C E:HEM104 3.1 20.4 1.0
CHA E:HEM104 3.3 20.4 1.0
CD2 F:HIS23 3.3 19.1 1.0
CD2 E:HIS23 3.3 21.7 1.0
CHD E:HEM104 3.4 20.4 1.0
CHB E:HEM104 3.5 20.4 1.0
CHC E:HEM104 3.5 20.4 1.0
C3D E:HEM104 4.1 20.4 1.0
C2A E:HEM104 4.1 20.4 1.0
C2D E:HEM104 4.1 20.4 1.0
ND1 F:HIS23 4.2 19.1 1.0
C3A E:HEM104 4.2 20.4 1.0
ND1 E:HIS23 4.2 21.7 1.0
C3C E:HEM104 4.3 20.4 1.0
C2B E:HEM104 4.3 20.4 1.0
C2C E:HEM104 4.3 20.4 1.0
CG F:HIS23 4.3 19.1 1.0
C3B E:HEM104 4.3 20.4 1.0
CG E:HIS23 4.4 21.7 1.0
CE1 E:TYR19 4.7 24.2 1.0
NE1 F:TRP19 4.9 19.4 1.0

Iron binding site 3 out of 6 in 8tow

Go back to Iron Binding Sites List in 8tow
Iron binding site 3 out of 6 in the Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
V:Fe201

b:18.5
occ:1.00
 FE V:HEM201 0.0 18.5 1.0
ND V:HEM201 1.9 18.5 1.0
NA V:HEM201 2.0 18.5 1.0
NE2 V:HIS66 2.0 17.4 1.0
NB V:HEM201 2.1 18.5 1.0
NC V:HEM201 2.1 18.5 1.0
NE2 V:HIS117 2.5 20.1 1.0
C4D V:HEM201 2.9 18.5 1.0
C1D V:HEM201 2.9 18.5 1.0
C1A V:HEM201 2.9 18.5 1.0
CD2 V:HIS66 2.9 17.4 1.0
C4A V:HEM201 3.0 18.5 1.0
C1B V:HEM201 3.0 18.5 1.0
C4B V:HEM201 3.0 18.5 1.0
CE1 V:HIS66 3.1 17.4 1.0
C4C V:HEM201 3.1 18.5 1.0
CD2 V:HIS117 3.1 20.1 1.0
C1C V:HEM201 3.1 18.5 1.0
CHA V:HEM201 3.3 18.5 1.0
CHD V:HEM201 3.4 18.5 1.0
CHB V:HEM201 3.4 18.5 1.0
CHC V:HEM201 3.5 18.5 1.0
CE1 V:HIS117 3.7 20.1 1.0
CG V:HIS66 4.1 17.4 1.0
C3D V:HEM201 4.1 18.5 1.0
ND1 V:HIS66 4.1 17.4 1.0
C2A V:HEM201 4.1 18.5 1.0
C2D V:HEM201 4.1 18.5 1.0
C3A V:HEM201 4.2 18.5 1.0
C2B V:HEM201 4.2 18.5 1.0
C3B V:HEM201 4.2 18.5 1.0
C3C V:HEM201 4.3 18.5 1.0
C2C V:HEM201 4.3 18.5 1.0
CG V:HIS117 4.4 20.1 1.0
ND1 V:HIS117 4.6 20.1 1.0
CE2 V:PHE100 4.9 20.8 1.0

Iron binding site 4 out of 6 in 8tow

Go back to Iron Binding Sites List in 8tow
Iron binding site 4 out of 6 in the Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Fe402

b:15.2
occ:1.00
 NE2 d:HIS214 2.2 3.8 1.0
NE2 a:HIS215 2.2 3.6 1.0
NE2 a:HIS272 2.3 5.1 1.0
NE2 d:HIS268 2.4 2.5 1.0
O3 a:BCT417 2.8 8.7 1.0
O1 a:BCT417 2.9 8.7 1.0
CD2 a:HIS215 3.0 3.6 1.0
CD2 d:HIS214 3.1 3.8 1.0
C a:BCT417 3.2 8.7 1.0
CE1 a:HIS272 3.2 5.1 1.0
CE1 d:HIS214 3.2 3.8 1.0
CD2 d:HIS268 3.3 2.5 1.0
CE1 a:HIS215 3.3 3.6 1.0
CE1 d:HIS268 3.3 2.5 1.0
CD2 a:HIS272 3.4 5.1 1.0
CG a:HIS215 4.2 3.6 1.0
O2 a:BCT417 4.3 8.7 1.0
ND1 d:HIS214 4.3 3.8 1.0
CG d:HIS214 4.3 3.8 1.0
ND1 a:HIS215 4.3 3.6 1.0
ND1 a:HIS272 4.3 5.1 1.0
ND1 d:HIS268 4.5 2.5 1.0
CG a:HIS272 4.5 5.1 1.0
CG d:HIS268 4.5 2.5 1.0
OH d:TYR244 4.8 4.1 1.0
CG2 d:VAL218 4.8 3.8 1.0
CG2 a:VAL219 4.8 4.2 1.0
OH a:TYR246 4.9 7.3 1.0
CD2 d:LEU267 5.0 2.5 1.0

Iron binding site 5 out of 6 in 8tow

Go back to Iron Binding Sites List in 8tow
Iron binding site 5 out of 6 in the Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
e:Fe104

b:20.4
occ:1.00
 FE e:HEM104 0.0 20.4 1.0
ND e:HEM104 1.9 20.4 1.0
NA e:HEM104 2.0 20.4 1.0
NC e:HEM104 2.1 20.4 1.0
NB e:HEM104 2.1 20.4 1.0
NE2 e:HIS23 2.2 21.7 1.0
NE2 f:HIS23 2.3 19.1 1.0
C4D e:HEM104 2.9 20.4 1.0
C1D e:HEM104 2.9 20.4 1.0
C1A e:HEM104 2.9 20.4 1.0
C4A e:HEM104 3.0 20.4 1.0
CE1 f:HIS23 3.0 19.1 1.0
C4C e:HEM104 3.0 20.4 1.0
CE1 e:HIS23 3.0 21.7 1.0
C1B e:HEM104 3.1 20.4 1.0
C4B e:HEM104 3.1 20.4 1.0
C1C e:HEM104 3.1 20.4 1.0
CHA e:HEM104 3.3 20.4 1.0
CD2 f:HIS23 3.3 19.1 1.0
CD2 e:HIS23 3.3 21.7 1.0
CHD e:HEM104 3.4 20.4 1.0
CHB e:HEM104 3.5 20.4 1.0
CHC e:HEM104 3.5 20.4 1.0
C3D e:HEM104 4.1 20.4 1.0
C2A e:HEM104 4.1 20.4 1.0
C2D e:HEM104 4.1 20.4 1.0
ND1 f:HIS23 4.2 19.1 1.0
C3A e:HEM104 4.2 20.4 1.0
ND1 e:HIS23 4.2 21.7 1.0
C3C e:HEM104 4.3 20.4 1.0
C2B e:HEM104 4.3 20.4 1.0
C2C e:HEM104 4.3 20.4 1.0
CG f:HIS23 4.3 19.1 1.0
C3B e:HEM104 4.3 20.4 1.0
CG e:HIS23 4.4 21.7 1.0
CE1 e:TYR19 4.7 24.2 1.0
NE1 f:TRP19 4.9 19.4 1.0

Iron binding site 6 out of 6 in 8tow

Go back to Iron Binding Sites List in 8tow
Iron binding site 6 out of 6 in the Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Structure of A Mutated Photosystem II Complex Reveals Perturbation of the Oxygen-Evolving Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
v:Fe201

b:18.5
occ:1.00
 FE v:HEM201 0.0 18.5 1.0
ND v:HEM201 1.9 18.5 1.0
NA v:HEM201 2.0 18.5 1.0
NE2 v:HIS66 2.0 17.4 1.0
NB v:HEM201 2.1 18.5 1.0
NC v:HEM201 2.1 18.5 1.0
NE2 v:HIS117 2.5 20.1 1.0
C4D v:HEM201 2.9 18.5 1.0
C1D v:HEM201 2.9 18.5 1.0
C1A v:HEM201 2.9 18.5 1.0
CD2 v:HIS66 2.9 17.4 1.0
C4A v:HEM201 3.0 18.5 1.0
C1B v:HEM201 3.0 18.5 1.0
C4B v:HEM201 3.0 18.5 1.0
CE1 v:HIS66 3.1 17.4 1.0
C4C v:HEM201 3.1 18.5 1.0
CD2 v:HIS117 3.1 20.1 1.0
C1C v:HEM201 3.1 18.5 1.0
CHA v:HEM201 3.3 18.5 1.0
CHD v:HEM201 3.4 18.5 1.0
CHB v:HEM201 3.4 18.5 1.0
CHC v:HEM201 3.5 18.5 1.0
CE1 v:HIS117 3.7 20.1 1.0
CG v:HIS66 4.1 17.4 1.0
C3D v:HEM201 4.1 18.5 1.0
ND1 v:HIS66 4.1 17.4 1.0
C2A v:HEM201 4.1 18.5 1.0
C2D v:HEM201 4.1 18.5 1.0
C3A v:HEM201 4.2 18.5 1.0
C2B v:HEM201 4.2 18.5 1.0
C3B v:HEM201 4.2 18.5 1.0
C3C v:HEM201 4.3 18.5 1.0
C2C v:HEM201 4.3 18.5 1.0
CG v:HIS117 4.4 20.1 1.0
ND1 v:HIS117 4.6 20.1 1.0
CE2 v:PHE100 4.9 20.8 1.0

Reference:

D.A.Flesher, G.W.Brudvig. Mutation-Induced Shift of the Photosystem II Active Site Reveals Insight Into Conserved Water Channels To Be Published.
Page generated: Sat Aug 10 18:20:57 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy