Iron in PDB 8u09: Crystal Structure of Substrate-Free Syoa

Enzymatic activity of Crystal Structure of Substrate-Free Syoa

All present enzymatic activity of Crystal Structure of Substrate-Free Syoa:
1.14.14.1;

Protein crystallography data

The structure of Crystal Structure of Substrate-Free Syoa, PDB code: 8u09 was solved by A.H.Harlington, K.E.Shearwin, S.G.Bell, F.Whelan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.19 / 1.98
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 54.86, 150.242, 60.642, 90, 90, 90
R / Rfree (%) 17.2 / 20.5

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Substrate-Free Syoa (pdb code 8u09). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Substrate-Free Syoa, PDB code: 8u09:

Iron binding site 1 out of 1 in 8u09

Go back to Iron Binding Sites List in 8u09
Iron binding site 1 out of 1 in the Crystal Structure of Substrate-Free Syoa


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Substrate-Free Syoa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:15.4
occ:1.00
FE A:HEM501 0.0 15.4 1.0
ND A:HEM501 2.0 13.3 1.0
NB A:HEM501 2.0 11.4 1.0
NC A:HEM501 2.0 13.9 1.0
NA A:HEM501 2.1 13.7 1.0
SG A:CYS360 2.2 16.5 1.0
O A:HOH632 2.5 25.6 1.0
C4B A:HEM501 3.0 17.4 1.0
C4D A:HEM501 3.0 16.3 1.0
C1C A:HEM501 3.0 17.3 1.0
C1A A:HEM501 3.1 19.7 1.0
C1D A:HEM501 3.1 16.2 1.0
C4C A:HEM501 3.1 14.3 1.0
C1B A:HEM501 3.1 13.3 1.0
C4A A:HEM501 3.1 15.8 1.0
CB A:CYS360 3.3 12.4 1.0
CHC A:HEM501 3.4 15.6 1.0
CHA A:HEM501 3.4 14.5 1.0
CHD A:HEM501 3.5 16.4 1.0
CHB A:HEM501 3.5 18.2 1.0
CA A:CYS360 4.1 15.1 1.0
C3B A:HEM501 4.3 15.1 1.0
C3D A:HEM501 4.3 17.0 1.0
C2D A:HEM501 4.3 18.3 1.0
C2C A:HEM501 4.3 17.8 1.0
C2B A:HEM501 4.3 9.9 1.0
C3C A:HEM501 4.3 13.5 1.0
C2A A:HEM501 4.3 17.4 1.0
C3A A:HEM501 4.3 16.2 1.0
O A:GLY249 4.6 26.8 1.0
N A:GLY362 4.6 14.6 1.0
C A:CYS360 4.7 13.8 1.0
N A:SER361 4.8 18.4 1.0
O3 A:GOL504 4.8 34.9 1.0
C3 A:GOL504 4.8 37.4 1.0

Reference:

A.H.Harlington, K.E.Shearwin, S.G.Bell, F.Whelan. Structural Insights Into the S-Lignin O-Demethylase Syoa To Be Published.
Page generated: Sat Aug 10 18:21:58 2024

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