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Iron in PDB 8u1i: Crystal Structure of Syoa Bound to 4-Methylsyringol

Enzymatic activity of Crystal Structure of Syoa Bound to 4-Methylsyringol

All present enzymatic activity of Crystal Structure of Syoa Bound to 4-Methylsyringol:
1.14.14.1;

Protein crystallography data

The structure of Crystal Structure of Syoa Bound to 4-Methylsyringol, PDB code: 8u1i was solved by A.C.Harlington, K.E.Shearwin, S.G.Bell, F.Whelan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.60 / 1.12
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 57.414, 62.764, 58.078, 90, 104.58, 90
R / Rfree (%) 13.7 / 15.4

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Syoa Bound to 4-Methylsyringol (pdb code 8u1i). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Syoa Bound to 4-Methylsyringol, PDB code: 8u1i:

Iron binding site 1 out of 1 in 8u1i

Go back to Iron Binding Sites List in 8u1i
Iron binding site 1 out of 1 in the Crystal Structure of Syoa Bound to 4-Methylsyringol


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Syoa Bound to 4-Methylsyringol within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:9.8
occ:1.00
FE A:HEM501 0.0 9.8 1.0
NB A:HEM501 2.0 9.7 1.0
NC A:HEM501 2.0 9.5 1.0
NA A:HEM501 2.0 8.9 1.0
ND A:HEM501 2.1 9.6 1.0
SG A:CYS360 2.3 10.4 1.0
C4B A:HEM501 3.0 9.2 1.0
C4A A:HEM501 3.0 8.5 1.0
C1B A:HEM501 3.1 9.3 1.0
C1C A:HEM501 3.1 9.6 1.0
C4C A:HEM501 3.1 10.1 1.0
C4D A:HEM501 3.1 9.5 1.0
C1A A:HEM501 3.1 9.5 1.0
C1D A:HEM501 3.1 9.8 1.0
CB A:CYS360 3.3 9.8 1.0
CHB A:HEM501 3.4 8.8 1.0
CHD A:HEM501 3.4 10.5 1.0
CHC A:HEM501 3.4 10.1 1.0
CHA A:HEM501 3.5 9.7 1.0
C12 A:UB9502 3.6 12.8 1.0
CA A:CYS360 4.0 9.5 1.0
C3B A:HEM501 4.3 9.8 1.0
C2B A:HEM501 4.3 9.6 1.0
C3A A:HEM501 4.3 8.8 1.0
C3C A:HEM501 4.3 11.2 1.0
C2C A:HEM501 4.3 10.3 1.0
C3D A:HEM501 4.3 10.2 1.0
C2D A:HEM501 4.3 10.8 1.0
C2A A:HEM501 4.3 9.6 1.0
N A:GLY362 4.5 11.2 1.0
C A:CYS360 4.7 10.2 1.0
N A:SER361 4.7 10.9 1.0
CA A:GLY362 4.9 11.5 1.0
O11 A:UB9502 5.0 11.6 1.0

Reference:

A.C.Harlington, K.E.Shearwin, S.G.Bell, F.Whelan. Structural Insights Into the S-Lignin O-Demethylase Syoa To Be Published.
Page generated: Sat Aug 10 18:22:29 2024

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