Atomistry » Iron » PDB 8u1i-8uoq » 8uco
Atomistry »
  Iron »
    PDB 8u1i-8uoq »
      8uco »

Iron in PDB 8uco: Cryoem Structure of Komagataella Pastoris Cytochrome C Oxidase (9 Subunits) in Complex with Human VMAT2 and Amphetamine

Other elements in 8uco:

The structure of Cryoem Structure of Komagataella Pastoris Cytochrome C Oxidase (9 Subunits) in Complex with Human VMAT2 and Amphetamine also contains other interesting chemical elements:

Copper (Cu) 3 atoms
Zinc (Zn) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Cryoem Structure of Komagataella Pastoris Cytochrome C Oxidase (9 Subunits) in Complex with Human VMAT2 and Amphetamine (pdb code 8uco). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Cryoem Structure of Komagataella Pastoris Cytochrome C Oxidase (9 Subunits) in Complex with Human VMAT2 and Amphetamine, PDB code: 8uco:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 8uco

Go back to Iron Binding Sites List in 8uco
Iron binding site 1 out of 2 in the Cryoem Structure of Komagataella Pastoris Cytochrome C Oxidase (9 Subunits) in Complex with Human VMAT2 and Amphetamine


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cryoem Structure of Komagataella Pastoris Cytochrome C Oxidase (9 Subunits) in Complex with Human VMAT2 and Amphetamine within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Fe602

b:44.5
occ:1.00
FE a:HEA602 0.0 44.5 1.0
NA a:HEA602 1.9 44.5 1.0
NB a:HEA602 1.9 44.5 1.0
ND a:HEA602 1.9 44.5 1.0
NC a:HEA602 1.9 44.5 1.0
NE2 a:HIS380 2.7 42.9 1.0
C1D a:HEA602 2.9 44.5 1.0
C1B a:HEA602 2.9 44.5 1.0
C4C a:HEA602 2.9 44.5 1.0
C4A a:HEA602 2.9 44.5 1.0
C4B a:HEA602 3.0 44.5 1.0
C1A a:HEA602 3.0 44.5 1.0
C4D a:HEA602 3.0 44.5 1.0
C1C a:HEA602 3.0 44.5 1.0
CHD a:HEA602 3.1 44.5 1.0
CHB a:HEA602 3.2 44.5 1.0
CE1 a:HIS380 3.2 42.9 1.0
NE2 a:HIS64 3.2 42.2 1.0
CHC a:HEA602 3.3 44.5 1.0
CHA a:HEA602 3.4 44.5 1.0
CD2 a:HIS380 3.5 42.9 1.0
CD2 a:HIS64 4.0 42.2 1.0
ND1 a:HIS380 4.1 42.9 1.0
C3C a:HEA602 4.1 44.5 1.0
C3A a:HEA602 4.1 44.5 1.0
C2D a:HEA602 4.1 44.5 1.0
C2B a:HEA602 4.1 44.5 1.0
C2A a:HEA602 4.1 44.5 1.0
C2C a:HEA602 4.1 44.5 1.0
C3B a:HEA602 4.2 44.5 1.0
C3D a:HEA602 4.2 44.5 1.0
CG a:HIS380 4.3 42.9 1.0
CE1 a:HIS64 4.3 42.2 1.0
CE1 a:PHE379 4.8 43.2 1.0

Iron binding site 2 out of 2 in 8uco

Go back to Iron Binding Sites List in 8uco
Iron binding site 2 out of 2 in the Cryoem Structure of Komagataella Pastoris Cytochrome C Oxidase (9 Subunits) in Complex with Human VMAT2 and Amphetamine


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cryoem Structure of Komagataella Pastoris Cytochrome C Oxidase (9 Subunits) in Complex with Human VMAT2 and Amphetamine within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Fe603

b:46.0
occ:1.00
FE a:HEA603 0.0 46.0 1.0
ND a:HEA603 1.9 46.0 1.0
NA a:HEA603 1.9 46.0 1.0
NB a:HEA603 1.9 46.0 1.0
NC a:HEA603 1.9 46.0 1.0
C4D a:HEA603 2.9 46.0 1.0
C4B a:HEA603 2.9 46.0 1.0
C1C a:HEA603 2.9 46.0 1.0
C1A a:HEA603 2.9 46.0 1.0
C1D a:HEA603 3.0 46.0 1.0
C1B a:HEA603 3.0 46.0 1.0
C4A a:HEA603 3.0 46.0 1.0
C4C a:HEA603 3.0 46.0 1.0
CHC a:HEA603 3.1 46.0 1.0
CHA a:HEA603 3.1 46.0 1.0
CHD a:HEA603 3.4 46.0 1.0
CHB a:HEA603 3.4 46.0 1.0
CU a:CU601 3.7 46.8 1.0
NE2 a:HIS378 3.8 43.7 1.0
C2C a:HEA603 4.1 46.0 1.0
CE1 a:HIS243 4.1 42.4 1.0
C2A a:HEA603 4.1 46.0 1.0
C3C a:HEA603 4.2 46.0 1.0
C3A a:HEA603 4.2 46.0 1.0
C3D a:HEA603 4.2 46.0 1.0
C3B a:HEA603 4.2 46.0 1.0
C2D a:HEA603 4.2 46.0 1.0
C2B a:HEA603 4.2 46.0 1.0
CE1 a:HIS378 4.6 43.7 1.0
CG2 a:VAL246 4.7 41.8 1.0
ND1 a:HIS243 4.7 42.4 1.0
CD2 a:HIS378 4.7 43.7 1.0

Reference:

J.Ye, B.Liu, W.Li. Cryoem Structure of Komagataella Pastoris Cytochrome C Oxidase (9 Subunits) in Complex with Human VMAT2 and Amphetamin To Be Published.
Page generated: Thu Aug 7 23:54:47 2025

Last articles

Fe in 9C1Y
Fe in 9C0R
Fe in 9C0Q
Fe in 9BT4
Fe in 9BUO
Fe in 9BWU
Fe in 9BTS
Fe in 9BW8
Fe in 9BP5
Fe in 9BOV
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy