Iron in PDB 8ucp: Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Serotonin

The structure of Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Serotonin also contains other interesting chemical elements:

Zinc	(Zn)	1 atom
Copper	(Cu)	3 atoms

The binding sites of Iron atom in the Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Serotonin (pdb code 8ucp). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Serotonin, PDB code: 8ucp:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Serotonin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Serotonin within 5.0Å range: probe atom residue distance (Å) B Occ a:Fe602 b:32.8 occ:1.00 FE a:HEA602 0.0 32.8 1.0 NA a:HEA602 1.9 32.8 1.0 NB a:HEA602 1.9 32.8 1.0 NC a:HEA602 1.9 32.8 1.0 ND a:HEA602 1.9 32.8 1.0 NE2 a:HIS380 2.6 31.9 1.0 C1B a:HEA602 2.9 32.8 1.0 C1D a:HEA602 2.9 32.8 1.0 C4A a:HEA602 2.9 32.8 1.0 C4C a:HEA602 2.9 32.8 1.0 C4B a:HEA602 3.0 32.8 1.0 C1C a:HEA602 3.0 32.8 1.0 C4D a:HEA602 3.0 32.8 1.0 C1A a:HEA602 3.0 32.8 1.0 CE1 a:HIS64 3.0 30.0 1.0 CHB a:HEA602 3.1 32.8 1.0 CHD a:HEA602 3.1 32.8 1.0 CD2 a:HIS380 3.3 31.9 1.0 CHC a:HEA602 3.3 32.8 1.0 CE1 a:HIS380 3.3 31.9 1.0 CHA a:HEA602 3.4 32.8 1.0 NE2 a:HIS64 3.9 30.0 1.0 ND1 a:HIS64 4.0 30.0 1.0 C3A a:HEA602 4.1 32.8 1.0 C3C a:HEA602 4.1 32.8 1.0 C2C a:HEA602 4.1 32.8 1.0 C2B a:HEA602 4.1 32.8 1.0 C2A a:HEA602 4.1 32.8 1.0 C2D a:HEA602 4.1 32.8 1.0 C3D a:HEA602 4.2 32.8 1.0 C3B a:HEA602 4.2 32.8 1.0 CG a:HIS380 4.2 31.9 1.0 ND1 a:HIS380 4.3 31.9 1.0

Iron binding site 2 out of 2 in the Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Serotonin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Serotonin within 5.0Å range: probe atom residue distance (Å) B Occ a:Fe603 b:34.5 occ:1.00 FE a:HEA603 0.0 34.5 1.0 NA a:HEA603 1.9 34.5 1.0 ND a:HEA603 1.9 34.5 1.0 NB a:HEA603 1.9 34.5 1.0 NC a:HEA603 1.9 34.5 1.0 C4D a:HEA603 2.9 34.5 1.0 C4B a:HEA603 2.9 34.5 1.0 C1C a:HEA603 2.9 34.5 1.0 C1A a:HEA603 2.9 34.5 1.0 C1D a:HEA603 3.0 34.5 1.0 C1B a:HEA603 3.0 34.5 1.0 C4A a:HEA603 3.0 34.5 1.0 C4C a:HEA603 3.0 34.5 1.0 CHC a:HEA603 3.1 34.5 1.0 CHA a:HEA603 3.1 34.5 1.0 CHD a:HEA603 3.4 34.5 1.0 CHB a:HEA603 3.4 34.5 1.0 NE2 a:HIS378 3.7 32.7 1.0 CE1 a:HIS243 4.0 32.9 1.0 C2C a:HEA603 4.1 34.5 1.0 C2A a:HEA603 4.1 34.5 1.0 C3C a:HEA603 4.1 34.5 1.0 C3A a:HEA603 4.1 34.5 1.0 C3D a:HEA603 4.1 34.5 1.0 C3B a:HEA603 4.2 34.5 1.0 C2D a:HEA603 4.2 34.5 1.0 C2B a:HEA603 4.2 34.5 1.0 CE1 a:HIS378 4.5 32.7 1.0 CG2 a:VAL246 4.6 32.4 1.0 ND1 a:HIS243 4.7 32.9 1.0 CD2 a:HIS378 4.7 32.7 1.0 CU a:CU601 4.7 42.3 1.0 NE2 a:HIS243 4.8 32.9 1.0

J.Ye, B.Liu, W.Li. Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Serotonin To Be Published.