Iron in PDB 8vtj: Crystal Structure of R. Sphaeroides Photosynthetic Reaction Center Variant Y(M210)2-Cyanophenylalanine

Protein crystallography data

The structure of Crystal Structure of R. Sphaeroides Photosynthetic Reaction Center Variant Y(M210)2-Cyanophenylalanine, PDB code: 8vtj was solved by I.Mathews, K.Tran, S.G.Boxer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.85 / 2.81
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 141.29, 141.29, 187.18, 90, 90, 120
R / Rfree (%) 17.1 / 19.7

Other elements in 8vtj:

The structure of Crystal Structure of R. Sphaeroides Photosynthetic Reaction Center Variant Y(M210)2-Cyanophenylalanine also contains other interesting chemical elements:

Chlorine (Cl) 1 atom
Magnesium (Mg) 4 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of R. Sphaeroides Photosynthetic Reaction Center Variant Y(M210)2-Cyanophenylalanine (pdb code 8vtj). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of R. Sphaeroides Photosynthetic Reaction Center Variant Y(M210)2-Cyanophenylalanine, PDB code: 8vtj:

Iron binding site 1 out of 1 in 8vtj

Go back to Iron Binding Sites List in 8vtj
Iron binding site 1 out of 1 in the Crystal Structure of R. Sphaeroides Photosynthetic Reaction Center Variant Y(M210)2-Cyanophenylalanine


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of R. Sphaeroides Photosynthetic Reaction Center Variant Y(M210)2-Cyanophenylalanine within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Fe405

b:32.6
occ:1.00
OE2 M:GLU234 2.2 41.8 1.0
NE2 M:HIS219 2.2 40.2 1.0
NE2 L:HIS190 2.2 41.3 1.0
NE2 M:HIS266 2.3 38.3 1.0
NE2 L:HIS230 2.3 39.9 1.0
OE1 M:GLU234 2.4 44.5 1.0
CD M:GLU234 2.6 41.3 1.0
CE1 L:HIS190 2.9 37.5 1.0
CE1 M:HIS219 3.0 37.5 1.0
CE1 M:HIS266 3.1 38.4 1.0
CE1 L:HIS230 3.2 37.0 1.0
CD2 M:HIS219 3.3 39.0 1.0
CD2 L:HIS230 3.3 39.7 1.0
CD2 L:HIS190 3.4 41.7 1.0
CD2 M:HIS266 3.4 37.6 1.0
CG M:GLU234 4.1 35.6 1.0
ND1 L:HIS190 4.1 35.8 1.0
ND1 M:HIS219 4.2 36.1 1.0
ND1 M:HIS266 4.3 39.0 1.0
CG M:HIS219 4.3 38.1 1.0
ND1 L:HIS230 4.4 37.4 1.0
CG L:HIS190 4.4 39.0 1.0
CG1 M:ILE223 4.4 36.4 1.0
CG L:HIS230 4.4 36.8 1.0
CG M:HIS266 4.5 39.9 1.0
CG2 L:VAL194 4.6 36.7 1.0
O M:HOH511 4.8 39.3 1.0
CB M:GLU234 4.9 35.1 1.0

Reference:

I.Mathews, K.Tran, S.G.Boxer. Crystal Structure of R. Sphaeroides Photosynthetic Reaction Center Variant Y(M210)2-Cyanophenylalanine To Be Published.
Page generated: Sat Aug 10 18:45:44 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy