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Iron in PDB 8vtk: Crystal Structure of R.Sphaeroides Photosynthetic Reaction Center Variant Y(M210)2-Chlorophenylalanine

Protein crystallography data

The structure of Crystal Structure of R.Sphaeroides Photosynthetic Reaction Center Variant Y(M210)2-Chlorophenylalanine, PDB code: 8vtk was solved by K.Tran, I.Mathews, S.G.Boxer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.76 / 3.07
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 140.95, 140.95, 186.72, 90, 90, 120
R / Rfree (%) 17.7 / 21.3

Other elements in 8vtk:

The structure of Crystal Structure of R.Sphaeroides Photosynthetic Reaction Center Variant Y(M210)2-Chlorophenylalanine also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms
Magnesium (Mg) 4 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of R.Sphaeroides Photosynthetic Reaction Center Variant Y(M210)2-Chlorophenylalanine (pdb code 8vtk). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of R.Sphaeroides Photosynthetic Reaction Center Variant Y(M210)2-Chlorophenylalanine, PDB code: 8vtk:

Iron binding site 1 out of 1 in 8vtk

Go back to Iron Binding Sites List in 8vtk
Iron binding site 1 out of 1 in the Crystal Structure of R.Sphaeroides Photosynthetic Reaction Center Variant Y(M210)2-Chlorophenylalanine


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of R.Sphaeroides Photosynthetic Reaction Center Variant Y(M210)2-Chlorophenylalanine within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Fe301

b:130.8
occ:1.00
C3M L:U10305 2.6 124.2 1.0
CD2 L:PHE216 3.4 79.6 1.0
CE2 L:PHE216 3.5 76.0 1.0
N L:ILE224 3.8 54.9 1.0
O L:TYR222 3.9 63.1 1.0
O3 L:U10305 4.0 135.4 1.0
CG L:PHE216 4.2 72.8 1.0
CB L:ILE224 4.3 53.4 1.0
CZ L:PHE216 4.3 79.1 1.0
CG2 L:ILE224 4.3 47.5 1.0
CA L:SER223 4.3 57.2 1.0
C L:SER223 4.6 57.5 1.0
CA L:ILE224 4.6 54.1 1.0
O2 L:U10305 4.7 126.1 1.0
CD2 L:TYR222 4.7 54.9 1.0
C L:TYR222 4.7 62.5 1.0
C3 L:U10305 4.8 150.7 1.0
CB L:PHE216 4.9 66.8 1.0
CD1 L:PHE216 4.9 66.6 1.0
N L:SER223 5.0 59.4 1.0
CE1 L:PHE216 5.0 71.8 1.0
CG2 L:VAL220 5.0 59.0 1.0

Reference:

K.Tran, I.Mathews, S.G.Boxer. Crystal Structure of R.Sphaeroides Photosynthetic Reaction Center Variant Y(M210)2-Chlorophenylalanine To Be Published.
Page generated: Sat Aug 10 18:45:45 2024

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