Iron in PDB 8w93: Azumapecten Farreri Homopolymeric Ferritin (Apf) Mutant-H2KE

The structure of Azumapecten Farreri Homopolymeric Ferritin (Apf) Mutant-H2KE, PDB code: 8w93 was solved by T.Zhang, R.Jiao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	26.18 / 2.09
Space group	I 4 3 2
Cell size a, b, c (Å), α, β, γ (°)	152.679, 152.679, 152.679, 90, 90, 90
R / Rfree (%)	17.8 / 20.2

The binding sites of Iron atom in the Azumapecten Farreri Homopolymeric Ferritin (Apf) Mutant-H2KE (pdb code 8w93). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Azumapecten Farreri Homopolymeric Ferritin (Apf) Mutant-H2KE, PDB code: 8w93:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Azumapecten Farreri Homopolymeric Ferritin (Apf) Mutant-H2KE


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Azumapecten Farreri Homopolymeric Ferritin (Apf) Mutant-H2KE within 5.0Å range: probe atom residue distance (Å) B Occ b:Fe201 b:19.1 occ:1.00 OE1 b:GLU59 2.0 23.9 1.0 O b:HOH332 2.0 24.5 1.0 OE1 b:GLU24 2.0 19.5 1.0 ND1 b:HIS62 2.1 24.1 1.0 O b:HOH309 2.3 24.6 1.0 CD b:GLU59 2.9 24.3 1.0 CE1 b:HIS62 3.0 25.1 1.0 OE2 b:GLU59 3.1 30.4 1.0 CD b:GLU24 3.1 20.3 1.0 CG b:HIS62 3.1 22.1 1.0 CB b:HIS62 3.5 21.7 1.0 OE2 b:GLU24 3.5 22.4 1.0 OE1 b:GLN138 4.1 32.5 1.0 O b:HOH376 4.1 22.9 1.0 CG1 b:VAL107 4.1 16.0 1.0 NE2 b:HIS62 4.2 25.6 1.0 CG b:GLU59 4.2 24.3 1.0 CD2 b:HIS62 4.2 24.9 1.0 CA b:GLU59 4.4 23.0 1.0 CG b:GLU24 4.4 20.2 1.0 FE b:FE202 4.5 49.6 0.5 CB b:GLU59 4.6 21.2 1.0 CB b:GLU24 4.7 21.1 1.0 O b:HOH351 4.7 34.1 1.0 CA b:GLU24 5.0 20.8 1.0 CD b:GLN138 5.0 25.9 1.0

Iron binding site 2 out of 2 in the Azumapecten Farreri Homopolymeric Ferritin (Apf) Mutant-H2KE


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Azumapecten Farreri Homopolymeric Ferritin (Apf) Mutant-H2KE within 5.0Å range: probe atom residue distance (Å) B Occ b:Fe202 b:49.6 occ:0.54 O b:HOH351 2.1 34.1 1.0 OE2 b:GLU59 2.3 30.4 1.0 O b:HOH320 2.4 32.4 1.0 OE2 b:GLU104 2.4 34.0 1.0 OD2 b:ASP141 2.7 44.1 1.0 OE1 b:GLU104 2.8 33.3 1.0 CD b:GLU104 2.9 30.1 1.0 O b:HOH309 3.1 24.6 1.0 CD b:GLU59 3.5 24.3 1.0 CG b:ASP141 3.9 35.5 1.0 OE1 b:GLN138 3.9 32.5 1.0 NZ b:LYS55 4.0 39.8 1.0 CE b:LYS55 4.2 37.7 1.0 CE1 b:HIS62 4.2 25.1 1.0 CG b:GLU104 4.3 25.3 1.0 OE1 b:GLU59 4.4 23.9 1.0 CG b:GLU59 4.4 24.3 1.0 FE b:FE201 4.5 19.1 1.0 OE1 b:GLU58 4.5 31.8 1.0 CE2 b:TYR31 4.5 27.8 1.0 CB b:ASP141 4.6 29.1 1.0 OH b:TYR31 4.7 33.3 1.0 ND1 b:HIS62 4.7 24.1 1.0 CD b:GLN138 4.8 25.9 1.0 OD1 b:ASP141 4.9 37.1 1.0 OE2 b:GLU137 4.9 53.9 1.0 NE2 b:GLN138 4.9 24.4 1.0

T.Zhang, R.Jiao. Azumapecten Farreri Homopolymeric Ferritin (Apf) Mutant-H2KE To Be Published.