Iron in PDB 8wb2: Heme-Bound Arabidopsis Thaliana Temperature-Induced Lipocalin

The structure of Heme-Bound Arabidopsis Thaliana Temperature-Induced Lipocalin, PDB code: 8wb2 was solved by C.Dong, L.Liu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	27.09 / 1.90
Space group	H 3 2
Cell size a, b, c (Å), α, β, γ (°)	75.685, 75.685, 208.238, 90, 90, 120
R / Rfree (%)	17.4 / 19.5

The binding sites of Iron atom in the Heme-Bound Arabidopsis Thaliana Temperature-Induced Lipocalin (pdb code 8wb2). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Heme-Bound Arabidopsis Thaliana Temperature-Induced Lipocalin, PDB code: 8wb2:

Iron binding site 1 out of 1 in the Heme-Bound Arabidopsis Thaliana Temperature-Induced Lipocalin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Heme-Bound Arabidopsis Thaliana Temperature-Induced Lipocalin within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe301 b:42.1 occ:1.00 FE A:HEM301 0.0 42.1 1.0 NC A:HEM301 2.0 41.3 1.0 ND A:HEM301 2.0 41.9 1.0 NA A:HEM301 2.0 39.5 1.0 NB A:HEM301 2.1 42.0 1.0 O A:HOH412 2.4 45.9 1.0 C4C A:HEM301 3.0 39.6 1.0 C1A A:HEM301 3.0 43.9 1.0 C1C A:HEM301 3.0 40.9 1.0 C1D A:HEM301 3.0 40.7 1.0 C4D A:HEM301 3.1 44.7 1.0 C4A A:HEM301 3.1 42.0 1.0 C4B A:HEM301 3.1 40.2 1.0 C1B A:HEM301 3.1 42.2 1.0 CHA A:HEM301 3.4 44.9 1.0 CHD A:HEM301 3.4 41.4 1.0 CHC A:HEM301 3.4 41.9 1.0 CHB A:HEM301 3.5 41.6 1.0 ND2 A:ASN56 3.8 39.7 1.0 O A:HOH478 4.1 42.2 1.0 OE1 A:GLN33 4.2 47.2 1.0 C3C A:HEM301 4.2 41.0 1.0 OG A:SER30 4.2 51.1 1.0 C2A A:HEM301 4.2 44.3 1.0 C2C A:HEM301 4.3 39.2 1.0 C2D A:HEM301 4.3 43.3 1.0 C3A A:HEM301 4.3 41.3 1.0 C3D A:HEM301 4.3 43.9 1.0 C3B A:HEM301 4.3 39.5 1.0 C2B A:HEM301 4.4 39.4 1.0 CB A:GLN33 4.6 45.7 1.0 CG A:ASN56 4.7 39.1 1.0 CB A:SER30 4.8 56.5 1.0 CE2 A:PHE87 4.8 44.3 1.0 CD A:GLN33 4.8 47.2 1.0 CZ2 A:TRP125 4.8 42.9 1.0 CZ A:PHE87 4.8 41.1 1.0 CG A:GLN33 4.9 43.9 1.0

C.S.Dong, W.L.Zhang, X.Y.Wang, X.Wang, J.Wang, M.Wang, Y.Fang, L.Liu. Crystallographic and Functional Studies of A Plant Temperature-Induced Lipocalin. Biochim Biophys Acta Gen 30540 2023SUBJ.
ISSN: ISSN 1872-8006
PubMed: 38103756
DOI: 10.1016/J.BBAGEN.2023.130540