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Iron in PDB 8wej: Structure of Human Phagocyte Nadph Oxidase in the Activated State

Other elements in 8wej:

The structure of Structure of Human Phagocyte Nadph Oxidase in the Activated State also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Structure of Human Phagocyte Nadph Oxidase in the Activated State (pdb code 8wej). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Structure of Human Phagocyte Nadph Oxidase in the Activated State, PDB code: 8wej:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 8wej

Go back to Iron Binding Sites List in 8wej
Iron binding site 1 out of 2 in the Structure of Human Phagocyte Nadph Oxidase in the Activated State


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Human Phagocyte Nadph Oxidase in the Activated State within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe601

b:37.9
occ:1.00
FE B:HEM601 0.0 37.9 1.0
NA B:HEM601 2.0 37.9 1.0
NC B:HEM601 2.0 37.9 1.0
ND B:HEM601 2.1 37.9 1.0
NB B:HEM601 2.1 37.9 1.0
NE2 B:HIS115 2.1 35.5 1.0
NE2 B:HIS222 2.1 37.1 1.0
CD2 B:HIS115 2.8 35.5 1.0
CD2 B:HIS222 2.9 37.1 1.0
C4A B:HEM601 3.0 37.9 1.0
C1D B:HEM601 3.0 37.9 1.0
C1C B:HEM601 3.0 37.9 1.0
C1B B:HEM601 3.1 37.9 1.0
C4C B:HEM601 3.1 37.9 1.0
C1A B:HEM601 3.1 37.9 1.0
C4B B:HEM601 3.1 37.9 1.0
C4D B:HEM601 3.1 37.9 1.0
CE1 B:HIS115 3.2 35.5 1.0
CE1 B:HIS222 3.2 37.1 1.0
CHB B:HEM601 3.4 37.9 1.0
CHD B:HEM601 3.4 37.9 1.0
CHC B:HEM601 3.4 37.9 1.0
CHA B:HEM601 3.5 37.9 1.0
CG B:HIS115 3.9 35.5 1.0
ND1 B:HIS115 4.1 35.5 1.0
CG B:HIS222 4.1 37.1 1.0
ND1 B:HIS222 4.2 37.1 1.0
C3A B:HEM601 4.2 37.9 1.0
C2C B:HEM601 4.3 37.9 1.0
C2D B:HEM601 4.3 37.9 1.0
C3C B:HEM601 4.3 37.9 1.0
C2A B:HEM601 4.3 37.9 1.0
C2B B:HEM601 4.3 37.9 1.0
C3D B:HEM601 4.3 37.9 1.0
C3B B:HEM601 4.3 37.9 1.0
CD2 B:HIS119 4.5 36.8 1.0
NE2 B:HIS119 4.9 36.8 1.0

Iron binding site 2 out of 2 in 8wej

Go back to Iron Binding Sites List in 8wej
Iron binding site 2 out of 2 in the Structure of Human Phagocyte Nadph Oxidase in the Activated State


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure of Human Phagocyte Nadph Oxidase in the Activated State within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe602

b:33.4
occ:1.00
FE B:HEM602 0.0 33.4 1.0
NB B:HEM602 2.0 33.4 1.0
NC B:HEM602 2.0 33.4 1.0
ND B:HEM602 2.1 33.4 1.0
NA B:HEM602 2.1 33.4 1.0
NE2 B:HIS101 2.1 33.1 1.0
NE2 B:HIS209 2.1 31.1 1.0
CE1 B:HIS209 2.7 31.1 1.0
CD2 B:HIS101 2.8 33.1 1.0
C1B B:HEM602 3.1 33.4 1.0
C1C B:HEM602 3.1 33.4 1.0
C4A B:HEM602 3.1 33.4 1.0
C1D B:HEM602 3.1 33.4 1.0
C4B B:HEM602 3.1 33.4 1.0
C4C B:HEM602 3.1 33.4 1.0
C4D B:HEM602 3.1 33.4 1.0
C1A B:HEM602 3.1 33.4 1.0
CE1 B:HIS101 3.2 33.1 1.0
CD2 B:HIS209 3.3 31.1 1.0
CHC B:HEM602 3.4 33.4 1.0
CHB B:HEM602 3.4 33.4 1.0
CHD B:HEM602 3.4 33.4 1.0
CHA B:HEM602 3.5 33.4 1.0
ND1 B:HIS209 3.9 31.1 1.0
CG B:HIS101 4.0 33.1 1.0
ND1 B:HIS101 4.1 33.1 1.0
CG B:HIS209 4.2 31.1 1.0
C2B B:HEM602 4.3 33.4 1.0
C2C B:HEM602 4.3 33.4 1.0
C2D B:HEM602 4.3 33.4 1.0
C3B B:HEM602 4.3 33.4 1.0
C3A B:HEM602 4.3 33.4 1.0
C3C B:HEM602 4.3 33.4 1.0
C3D B:HEM602 4.3 33.4 1.0
C2A B:HEM602 4.3 33.4 1.0
CG1 B:VAL71 4.7 35.9 1.0

Reference:

L.Chen, X.Liu, R.Liu. Activation Mechanism of Phagocyte Nadph Oxidase By Cytosolic Factors To Be Published.
Page generated: Sat Aug 10 19:23:47 2024

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