Iron in PDB 8x2l: Structure of Human Phagocyte Nadph Oxidase in the Resting State in the Presence of 2 Mm Nadph

Other elements in 8x2l:

The structure of Structure of Human Phagocyte Nadph Oxidase in the Resting State in the Presence of 2 Mm Nadph also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Structure of Human Phagocyte Nadph Oxidase in the Resting State in the Presence of 2 Mm Nadph (pdb code 8x2l). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Structure of Human Phagocyte Nadph Oxidase in the Resting State in the Presence of 2 Mm Nadph, PDB code: 8x2l:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 8x2l

Go back to Iron Binding Sites List in 8x2l
Iron binding site 1 out of 2 in the Structure of Human Phagocyte Nadph Oxidase in the Resting State in the Presence of 2 Mm Nadph


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Human Phagocyte Nadph Oxidase in the Resting State in the Presence of 2 Mm Nadph within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe602

b:17.7
occ:1.00
FE B:HEM602 0.0 17.7 1.0
NA B:HEM602 2.0 17.7 1.0
NC B:HEM602 2.1 17.7 1.0
NB B:HEM602 2.1 17.7 1.0
ND B:HEM602 2.1 17.7 1.0
NE2 B:HIS115 2.1 15.9 1.0
NE2 B:HIS222 2.1 18.0 1.0
CD2 B:HIS222 2.8 18.0 1.0
CD2 B:HIS115 3.0 15.9 1.0
C4A B:HEM602 3.0 17.7 1.0
C1B B:HEM602 3.0 17.7 1.0
CE1 B:HIS115 3.1 15.9 1.0
C1C B:HEM602 3.1 17.7 1.0
C1D B:HEM602 3.1 17.7 1.0
C4C B:HEM602 3.1 17.7 1.0
C1A B:HEM602 3.1 17.7 1.0
C4B B:HEM602 3.1 17.7 1.0
C4D B:HEM602 3.1 17.7 1.0
CE1 B:HIS222 3.2 18.0 1.0
CHB B:HEM602 3.4 17.7 1.0
CHD B:HEM602 3.4 17.7 1.0
CHC B:HEM602 3.5 17.7 1.0
CHA B:HEM602 3.5 17.7 1.0
CG B:HIS222 4.0 18.0 1.0
CG B:HIS115 4.1 15.9 1.0
ND1 B:HIS115 4.1 15.9 1.0
ND1 B:HIS222 4.2 18.0 1.0
C3A B:HEM602 4.3 17.7 1.0
C2C B:HEM602 4.3 17.7 1.0
C2B B:HEM602 4.3 17.7 1.0
C2A B:HEM602 4.3 17.7 1.0
C2D B:HEM602 4.3 17.7 1.0
C3C B:HEM602 4.3 17.7 1.0
C3D B:HEM602 4.3 17.7 1.0
C3B B:HEM602 4.3 17.7 1.0
CD2 B:HIS119 4.7 16.4 1.0
NE2 B:HIS119 4.9 16.4 1.0

Iron binding site 2 out of 2 in 8x2l

Go back to Iron Binding Sites List in 8x2l
Iron binding site 2 out of 2 in the Structure of Human Phagocyte Nadph Oxidase in the Resting State in the Presence of 2 Mm Nadph


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure of Human Phagocyte Nadph Oxidase in the Resting State in the Presence of 2 Mm Nadph within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe603

b:18.4
occ:1.00
FE B:HEM603 0.0 18.4 1.0
ND B:HEM603 2.0 18.4 1.0
NC B:HEM603 2.1 18.4 1.0
NB B:HEM603 2.1 18.4 1.0
NA B:HEM603 2.1 18.4 1.0
NE2 B:HIS101 2.1 18.6 1.0
NE2 B:HIS209 2.1 16.0 1.0
CE1 B:HIS209 2.2 16.0 1.0
CD2 B:HIS101 2.8 18.6 1.0
C1D B:HEM603 3.0 18.4 1.0
C4D B:HEM603 3.1 18.4 1.0
C1C B:HEM603 3.1 18.4 1.0
C4B B:HEM603 3.1 18.4 1.0
C1B B:HEM603 3.1 18.4 1.0
C4C B:HEM603 3.1 18.4 1.0
C1A B:HEM603 3.1 18.4 1.0
C4A B:HEM603 3.1 18.4 1.0
CE1 B:HIS101 3.3 18.6 1.0
CHC B:HEM603 3.4 18.4 1.0
CHA B:HEM603 3.4 18.4 1.0
CHD B:HEM603 3.4 18.4 1.0
CD2 B:HIS209 3.4 16.0 1.0
CHB B:HEM603 3.5 18.4 1.0
ND1 B:HIS209 3.5 16.0 1.0
CG B:HIS101 4.0 18.6 1.0
CG B:HIS209 4.1 16.0 1.0
ND1 B:HIS101 4.2 18.6 1.0
C2D B:HEM603 4.3 18.4 1.0
C3D B:HEM603 4.3 18.4 1.0
C2C B:HEM603 4.3 18.4 1.0
C2B B:HEM603 4.3 18.4 1.0
C3B B:HEM603 4.3 18.4 1.0
C3C B:HEM603 4.3 18.4 1.0
C3A B:HEM603 4.3 18.4 1.0
C2A B:HEM603 4.3 18.4 1.0
CG1 B:VAL71 4.7 20.6 1.0

Reference:

L.Chen, X.Liu, R.Liu. Activation Mechanism of Phagocyte Nadph Oxidase By Cytosolic Factors To Be Published.
Page generated: Sat Aug 10 19:54:15 2024

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