Iron in PDB 8yts: The Structure of the Cytochrome C546/556 From Thioalkalivibrio Paradoxus with Unusual Uv-Vis Spectral Features at Atomic Resolution

The structure of The Structure of the Cytochrome C546/556 From Thioalkalivibrio Paradoxus with Unusual Uv-Vis Spectral Features at Atomic Resolution, PDB code: 8yts was solved by L.A.Varfolomeeva, A.Y.Solovieva, N.I.Dergousova, K.M.Boyko, T.V.Tikhonova, V.O.Popov, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	48.56 / 1.15
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	36.416, 37.601, 97.117, 90, 90, 90
R / Rfree (%)	11.4 / 14.4

The binding sites of Iron atom in the The Structure of the Cytochrome C546/556 From Thioalkalivibrio Paradoxus with Unusual Uv-Vis Spectral Features at Atomic Resolution (pdb code 8yts). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the The Structure of the Cytochrome C546/556 From Thioalkalivibrio Paradoxus with Unusual Uv-Vis Spectral Features at Atomic Resolution, PDB code: 8yts:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the The Structure of the Cytochrome C546/556 From Thioalkalivibrio Paradoxus with Unusual Uv-Vis Spectral Features at Atomic Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of The Structure of the Cytochrome C546/556 From Thioalkalivibrio Paradoxus with Unusual Uv-Vis Spectral Features at Atomic Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe201 b:7.4 occ:1.00 FE A:HEC201 0.0 7.4 1.0 NE2 A:HIS40 2.0 6.9 1.0 NA A:HEC201 2.0 7.1 1.0 NC A:HEC201 2.0 7.1 1.0 ND A:HEC201 2.0 7.3 1.0 NB A:HEC201 2.0 7.5 1.0 SD A:MET81 2.3 8.1 1.0 C1C A:HEC201 3.0 7.3 1.0 CE1 A:HIS40 3.0 7.2 1.0 C4C A:HEC201 3.0 7.8 1.0 C4A A:HEC201 3.0 7.6 1.0 C1D A:HEC201 3.0 7.9 1.0 C1B A:HEC201 3.0 7.5 1.0 C4B A:HEC201 3.0 7.8 1.0 C4D A:HEC201 3.0 7.8 1.0 C1A A:HEC201 3.0 7.4 1.0 CD2 A:HIS40 3.0 7.2 1.0 HE1 A:HIS40 3.2 7.5 1.0 HD2 A:HIS40 3.2 7.5 1.0 HE2 A:MET81 3.3 9.5 1.0 CE A:MET81 3.3 9.9 1.0 CHD A:HEC201 3.4 8.2 1.0 CHB A:HEC201 3.4 8.4 1.0 CHC A:HEC201 3.4 8.2 1.0 CHA A:HEC201 3.4 7.9 1.0 HG2 A:MET81 3.4 9.4 1.0 CG A:MET81 3.5 8.2 1.0 HE1 A:MET81 3.5 9.5 1.0 HB2 A:MET81 3.8 10.2 1.0 ND1 A:HIS40 4.1 7.7 1.0 CG A:HIS40 4.2 7.4 1.0 CB A:MET81 4.2 7.8 1.0 HE3 A:MET81 4.2 9.5 1.0 C3C A:HEC201 4.2 8.5 1.0 C2C A:HEC201 4.2 8.4 1.0 C3A A:HEC201 4.2 8.3 1.0 C2B A:HEC201 4.3 8.2 1.0 C3D A:HEC201 4.3 7.9 1.0 C2A A:HEC201 4.3 7.9 1.0 C2D A:HEC201 4.3 8.0 1.0 C3B A:HEC201 4.3 8.2 1.0 HG3 A:MET81 4.3 9.4 1.0 HA A:MET81 4.3 9.1 1.0 HHD A:HEC201 4.3 9.7 1.0 HHB A:HEC201 4.3 9.9 1.0 HHC A:HEC201 4.3 9.8 1.0 HHA A:HEC201 4.4 9.8 1.0 CA A:MET81 4.8 8.3 1.0 HD1 A:HIS40 4.9 7.0 0.0 HB2 A:HIS84 5.0 11.4 1.0

Iron binding site 2 out of 2 in the The Structure of the Cytochrome C546/556 From Thioalkalivibrio Paradoxus with Unusual Uv-Vis Spectral Features at Atomic Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of The Structure of the Cytochrome C546/556 From Thioalkalivibrio Paradoxus with Unusual Uv-Vis Spectral Features at Atomic Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe201 b:6.3 occ:1.00 FE B:HEC201 0.0 6.3 1.0 NC B:HEC201 2.0 6.2 1.0 NA B:HEC201 2.0 6.5 1.0 NB B:HEC201 2.0 6.3 1.0 NE2 B:HIS40 2.0 6.6 1.0 ND B:HEC201 2.0 6.3 1.0 SD B:MET81 2.3 7.0 1.0 CE1 B:HIS40 3.0 7.0 1.0 C4A B:HEC201 3.0 7.2 1.0 C1C B:HEC201 3.0 6.2 1.0 C4C B:HEC201 3.0 6.3 1.0 C1D B:HEC201 3.0 6.2 1.0 C1B B:HEC201 3.0 6.7 1.0 C4B B:HEC201 3.0 6.2 1.0 C1A B:HEC201 3.0 6.9 1.0 C4D B:HEC201 3.0 6.3 1.0 CD2 B:HIS40 3.0 6.3 1.0 HE1 B:HIS40 3.2 9.1 1.0 HD2 B:HIS40 3.2 9.1 1.0 HE2 B:MET81 3.4 8.6 1.0 CE B:MET81 3.4 9.1 1.0 CHC B:HEC201 3.4 6.4 1.0 CHB B:HEC201 3.4 7.5 1.0 CHD B:HEC201 3.4 7.2 1.0 CHA B:HEC201 3.4 6.6 1.0 HG2 B:MET81 3.5 8.5 1.0 CG B:MET81 3.5 6.8 1.0 HE1 B:MET81 3.6 8.6 1.0 HB2 B:MET81 3.8 7.6 1.0 ND1 B:HIS40 4.2 7.6 1.0 CG B:HIS40 4.2 6.9 1.0 CB B:MET81 4.2 7.0 1.0 HE3 B:MET81 4.2 8.6 1.0 C3C B:HEC201 4.2 6.7 1.0 C3A B:HEC201 4.2 8.2 1.0 C3B B:HEC201 4.3 6.6 1.0 C2C B:HEC201 4.3 6.8 1.0 C2D B:HEC201 4.3 6.7 1.0 C3D B:HEC201 4.3 6.5 1.0 C2A B:HEC201 4.3 7.6 1.0 C2B B:HEC201 4.3 7.3 1.0 HG3 B:MET81 4.3 8.5 1.0 HHC B:HEC201 4.3 8.5 1.0 HHB B:HEC201 4.3 8.6 1.0 HA B:MET81 4.3 8.2 1.0 HHD B:HEC201 4.4 8.5 1.0 HHA B:HEC201 4.4 8.5 1.0 CA B:MET81 4.9 7.3 1.0 HD1 B:HIS40 4.9 6.8 0.0

L.A.Varfolomeeva, A.Y.Solovieva, N.I.Dergousova, K.M.Boyko, T.V.Tikhonova, V.O.Popov. The Structure of the Cytochrome C546/556 From Thioalkalivibrio Paradoxus with Unusual Uv-Vis Spectral Features at Atomic Resolution To Be Published.