Iron in PDB 9az1: Crystal Structure of PR9465 Peroxidase From Pseudomonas Rhizosphaerae

Protein crystallography data

The structure of Crystal Structure of PR9465 Peroxidase From Pseudomonas Rhizosphaerae, PDB code: 9az1 was solved by P.J.Stogios, T.Skarina, Z.Choolaei, A.Yakunin, A.Savchenko, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.02 / 2.30
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 94.552, 94.552, 98.498, 90, 90, 90
R / Rfree (%) 20.3 / 24.9

Other elements in 9az1:

The structure of Crystal Structure of PR9465 Peroxidase From Pseudomonas Rhizosphaerae also contains other interesting chemical elements:

Chlorine (Cl) 6 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of PR9465 Peroxidase From Pseudomonas Rhizosphaerae (pdb code 9az1). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of PR9465 Peroxidase From Pseudomonas Rhizosphaerae, PDB code: 9az1:

Iron binding site 1 out of 1 in 9az1

Go back to Iron Binding Sites List in 9az1
Iron binding site 1 out of 1 in the Crystal Structure of PR9465 Peroxidase From Pseudomonas Rhizosphaerae


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of PR9465 Peroxidase From Pseudomonas Rhizosphaerae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:30.1
occ:1.00
FE A:HEM501 0.0 30.1 1.0
ND A:HEM501 2.0 26.4 1.0
NC A:HEM501 2.0 28.1 1.0
NA A:HEM501 2.1 24.7 1.0
NB A:HEM501 2.1 26.9 1.0
NE2 A:HIS335 2.2 28.7 1.0
O1 A:OXY502 2.8 28.2 1.0
C1D A:HEM501 3.0 25.1 1.0
C1C A:HEM501 3.1 30.0 1.0
C4D A:HEM501 3.1 26.3 1.0
C4A A:HEM501 3.1 26.2 1.0
C4C A:HEM501 3.1 29.1 1.0
CD2 A:HIS335 3.1 27.2 1.0
C1B A:HEM501 3.1 26.9 1.0
C1A A:HEM501 3.1 26.9 1.0
C4B A:HEM501 3.1 26.0 1.0
CE1 A:HIS335 3.3 28.7 1.0
CHD A:HEM501 3.4 26.2 1.0
CHC A:HEM501 3.4 26.4 1.0
CHA A:HEM501 3.4 27.6 1.0
CHB A:HEM501 3.4 27.2 1.0
O2 A:OXY502 4.0 27.5 1.0
NH1 A:ARG353 4.0 23.5 1.0
C2D A:HEM501 4.3 26.8 1.0
CG A:HIS335 4.3 27.0 1.0
C3D A:HEM501 4.3 28.0 1.0
C2C A:HEM501 4.3 27.2 1.0
C3A A:HEM501 4.3 26.6 1.0
C3C A:HEM501 4.3 25.6 1.0
C2B A:HEM501 4.3 27.3 1.0
C2A A:HEM501 4.3 29.6 1.0
C3B A:HEM501 4.3 25.1 1.0
ND1 A:HIS335 4.3 29.9 1.0
CD A:ARG353 4.5 27.6 1.0
CZ A:ARG353 4.7 25.5 1.0
NE A:ARG353 4.9 24.8 1.0

Reference:

P.J.Stogios, P.J.Stogios, T.Skarina, Z.Choolaei, A.Yakunin, A.Savchenko. N/A N/A.
Page generated: Sat Feb 8 18:45:09 2025

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