Iron in PDB 9bgv: Dosp R97A Straight Form

All present enzymatic activity of Dosp R97A Straight Form:
3.1.4.52;

The binding sites of Iron atom in the Dosp R97A Straight Form (pdb code 9bgv). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Dosp R97A Straight Form, PDB code: 9bgv:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Dosp R97A Straight Form


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Dosp R97A Straight Form within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe901 b:126.2 occ:1.00 FE A:HEM901 0.0 126.2 1.0 ND A:HEM901 2.0 126.2 1.0 NC A:HEM901 2.0 126.2 1.0 NB A:HEM901 2.0 126.2 1.0 NA A:HEM901 2.0 126.2 1.0 C1D A:HEM901 3.0 126.2 1.0 C4C A:HEM901 3.0 126.2 1.0 C4D A:HEM901 3.0 126.2 1.0 C1C A:HEM901 3.0 126.2 1.0 C1B A:HEM901 3.0 126.2 1.0 C4B A:HEM901 3.0 126.2 1.0 C4A A:HEM901 3.1 126.2 1.0 C1A A:HEM901 3.1 126.2 1.0 CHD A:HEM901 3.3 126.2 1.0 CHB A:HEM901 3.4 126.2 1.0 CHC A:HEM901 3.4 126.2 1.0 CHA A:HEM901 3.4 126.2 1.0 SD A:MET95 3.8 133.7 1.0 CG A:MET95 3.8 133.7 1.0 C2D A:HEM901 4.2 126.2 1.0 C3D A:HEM901 4.2 126.2 1.0 C2C A:HEM901 4.2 126.2 1.0 C3C A:HEM901 4.2 126.2 1.0 C2B A:HEM901 4.3 126.2 1.0 C3B A:HEM901 4.3 126.2 1.0 C3A A:HEM901 4.3 126.2 1.0 C2A A:HEM901 4.3 126.2 1.0 CD2 A:LEU73 4.9 148.2 1.0 CE A:MET95 5.0 133.7 1.0 NE2 A:HIS77 5.0 157.5 1.0 CD2 A:HIS77 5.0 157.5 1.0

Iron binding site 2 out of 2 in the Dosp R97A Straight Form


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Dosp R97A Straight Form within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe901 b:141.8 occ:1.00 FE B:HEM901 0.0 141.8 1.0 NC B:HEM901 2.1 141.8 1.0 NA B:HEM901 2.1 141.8 1.0 NB B:HEM901 2.1 141.8 1.0 ND B:HEM901 2.1 141.8 1.0 NE2 B:HIS77 2.2 151.0 1.0 CE1 B:HIS77 2.6 151.0 1.0 C4B B:HEM901 3.0 141.8 1.0 C1B B:HEM901 3.0 141.8 1.0 C1D B:HEM901 3.0 141.8 1.0 C4D B:HEM901 3.0 141.8 1.0 C4A B:HEM901 3.0 141.8 1.0 C1C B:HEM901 3.0 141.8 1.0 C1A B:HEM901 3.1 141.8 1.0 C4C B:HEM901 3.1 141.8 1.0 CE B:MET95 3.2 139.4 1.0 CHC B:HEM901 3.4 141.8 1.0 CHB B:HEM901 3.4 141.8 1.0 CHA B:HEM901 3.4 141.8 1.0 CHD B:HEM901 3.4 141.8 1.0 CD2 B:HIS77 3.5 151.0 1.0 ND1 B:HIS77 3.9 151.0 1.0 SD B:MET95 4.1 139.4 1.0 C2B B:HEM901 4.1 141.8 1.0 C3B B:HEM901 4.1 141.8 1.0 C2D B:HEM901 4.1 141.8 1.0 C3D B:HEM901 4.1 141.8 1.0 C3A B:HEM901 4.2 141.8 1.0 C2A B:HEM901 4.2 141.8 1.0 C2C B:HEM901 4.3 141.8 1.0 C3C B:HEM901 4.3 141.8 1.0 CG B:MET95 4.3 139.4 1.0 CG B:HIS77 4.3 151.0 1.0 CD1 B:LEU99 4.7 124.9 1.0

W.Wu, P.Kumar, C.A.Brautigam, S.C.Tso, H.R.Baniasadi, D.L.Kober, M.A.Gilles-Gonzalez. Structures of the Multi-Domain Oxygen Sensor Dosp: Remote Control of A C-Di-Gmp Phosphodiesterase By A Regulatory Pas Domain Nat Commun V. 15 9653 2024.
ISSN: ESSN 2041-1723
DOI: 10.1038/S41467-024-53942-7