Iron in PDB 9f0g: Lmcpfc H182A Variant in Complex with Iron Coproporhyrin III

Enzymatic activity of Lmcpfc H182A Variant in Complex with Iron Coproporhyrin III

All present enzymatic activity of Lmcpfc H182A Variant in Complex with Iron Coproporhyrin III:
4.99.1.9;

Protein crystallography data

The structure of Lmcpfc H182A Variant in Complex with Iron Coproporhyrin III, PDB code: 9f0g was solved by T.Gabler, S.Hofbauer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.61 / 1.85
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 37.534, 68.09, 63.2, 90, 102.71, 90
R / Rfree (%) 17.2 / 21.9

Other elements in 9f0g:

The structure of Lmcpfc H182A Variant in Complex with Iron Coproporhyrin III also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Lmcpfc H182A Variant in Complex with Iron Coproporhyrin III (pdb code 9f0g). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Lmcpfc H182A Variant in Complex with Iron Coproporhyrin III, PDB code: 9f0g:

Iron binding site 1 out of 1 in 9f0g

Go back to Iron Binding Sites List in 9f0g
Iron binding site 1 out of 1 in the Lmcpfc H182A Variant in Complex with Iron Coproporhyrin III


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Lmcpfc H182A Variant in Complex with Iron Coproporhyrin III within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe401

b:30.4
occ:0.84
FE A:FEC401 0.0 30.4 0.8
NB A:FEC401 2.1 31.9 0.8
NC A:FEC401 2.1 33.7 0.8
ND A:FEC401 2.1 31.2 0.8
NA A:FEC401 2.1 32.2 0.8
O A:HOH585 2.1 39.5 1.0
C1B A:FEC401 3.1 34.5 0.8
OH A:TYR12 3.1 40.3 1.0
C4A A:FEC401 3.1 33.5 0.8
C4B A:FEC401 3.1 34.7 0.8
C4C A:FEC401 3.1 33.4 0.8
C1D A:FEC401 3.1 28.3 0.8
C1C A:FEC401 3.2 37.0 0.8
C4D A:FEC401 3.2 30.0 0.8
C1A A:FEC401 3.2 33.6 0.8
CZ A:TYR12 3.2 32.9 1.0
CHB A:FEC401 3.5 34.6 0.8
CHD A:FEC401 3.5 31.6 0.8
CHC A:FEC401 3.5 31.5 0.8
CHA A:FEC401 3.6 28.0 0.8
CE1 A:TYR12 3.7 36.5 1.0
CE2 A:TYR12 3.7 31.8 1.0
OE2 A:GLU263 4.3 49.1 1.0
C2B A:FEC401 4.4 31.3 0.8
C3B A:FEC401 4.4 37.3 0.8
C3D A:FEC401 4.4 26.5 0.8
C2C A:FEC401 4.4 39.5 0.8
C3C A:FEC401 4.4 33.4 0.8
C2D A:FEC401 4.4 31.8 0.8
C3A A:FEC401 4.4 37.9 0.8
C2A A:FEC401 4.5 31.6 0.8
CD1 A:TYR12 4.5 30.4 1.0
CD2 A:TYR12 4.6 28.8 1.0
O A:HOH535 4.6 36.0 1.0
CG A:TYR12 4.9 28.9 1.0

Reference:

T.Gabler, S.Hofbauer. Lmcpfc H182A Variant in Complex with Iron Coproporhyrin III To Be Published.
Page generated: Sat Aug 10 20:29:16 2024

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