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Iron in PDB 9iuy: Cryo-Em Structure of Mouse Heavy-Chain Apoferritin Resolved at 1.51 Angstroms

Enzymatic activity of Cryo-Em Structure of Mouse Heavy-Chain Apoferritin Resolved at 1.51 Angstroms

All present enzymatic activity of Cryo-Em Structure of Mouse Heavy-Chain Apoferritin Resolved at 1.51 Angstroms:
1.16.3.1;

Other elements in 9iuy:

The structure of Cryo-Em Structure of Mouse Heavy-Chain Apoferritin Resolved at 1.51 Angstroms also contains other interesting chemical elements:

Magnesium (Mg) 32 atoms
Potassium (K) 24 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Cryo-Em Structure of Mouse Heavy-Chain Apoferritin Resolved at 1.51 Angstroms (pdb code 9iuy). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 6 binding sites of Iron where determined in the Cryo-Em Structure of Mouse Heavy-Chain Apoferritin Resolved at 1.51 Angstroms, PDB code: 9iuy:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6;

Iron binding site 1 out of 6 in 9iuy

Go back to Iron Binding Sites List in 9iuy
Iron binding site 1 out of 6 in the Cryo-Em Structure of Mouse Heavy-Chain Apoferritin Resolved at 1.51 Angstroms


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cryo-Em Structure of Mouse Heavy-Chain Apoferritin Resolved at 1.51 Angstroms within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe203

b:21.2
occ:1.00
 NE2 A:HIS173 3.1 6.9 1.0
NE2 G:HIS173 3.1 6.9 1.0
NE2 H:HIS173 3.1 6.9 1.0
NE2 D:HIS173 3.1 6.9 1.0
CE1 A:HIS173 3.9 3.9 1.0
CE1 G:HIS173 3.9 3.9 1.0
CE1 H:HIS173 3.9 3.9 1.0
CE1 D:HIS173 3.9 3.9 1.0
CD2 D:LEU169 4.0 1.5 1.0
CD2 A:LEU169 4.0 1.5 1.0
CD2 G:LEU169 4.0 1.5 1.0
CD2 H:LEU169 4.0 1.5 1.0
CD2 A:HIS173 4.1 2.2 1.0
CD2 G:HIS173 4.1 2.2 1.0
CD2 H:HIS173 4.1 2.2 1.0
CD2 D:HIS173 4.1 2.2 1.0
CD1 D:LEU169 4.7 1.1 1.0
CD1 A:LEU169 4.7 1.1 1.0
CD1 G:LEU169 4.7 1.1 1.0
CD1 H:LEU169 4.7 1.1 1.0
CG D:LEU169 4.9 0.0 1.0
CG A:LEU169 4.9 0.0 1.0
CG G:LEU169 4.9 0.0 1.0
CG H:LEU169 4.9 0.0 1.0

Iron binding site 2 out of 6 in 9iuy

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Iron binding site 2 out of 6 in the Cryo-Em Structure of Mouse Heavy-Chain Apoferritin Resolved at 1.51 Angstroms


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cryo-Em Structure of Mouse Heavy-Chain Apoferritin Resolved at 1.51 Angstroms within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe203

b:21.3
occ:1.00
 NE2 B:HIS173 3.1 6.9 1.0
NE2 J:HIS173 3.1 6.9 1.0
NE2 K:HIS173 3.1 6.9 1.0
NE2 I:HIS173 3.1 6.9 1.0
CE1 B:HIS173 3.9 3.9 1.0
CE1 J:HIS173 3.9 3.9 1.0
CE1 K:HIS173 3.9 3.9 1.0
CE1 I:HIS173 3.9 3.9 1.0
CD2 I:LEU169 4.0 1.5 1.0
CD2 B:LEU169 4.0 1.5 1.0
CD2 J:LEU169 4.0 1.5 1.0
CD2 K:LEU169 4.0 1.5 1.0
CD2 B:HIS173 4.1 2.2 1.0
CD2 J:HIS173 4.1 2.2 1.0
CD2 K:HIS173 4.1 2.2 1.0
CD2 I:HIS173 4.1 2.2 1.0
CD1 I:LEU169 4.7 1.1 1.0
CD1 B:LEU169 4.7 1.1 1.0
CD1 K:LEU169 4.7 1.1 1.0
CD1 J:LEU169 4.7 1.1 1.0
CG I:LEU169 4.9 0.0 1.0
CG J:LEU169 4.9 0.0 1.0
CG K:LEU169 4.9 0.0 1.0
CG B:LEU169 4.9 0.0 1.0

Iron binding site 3 out of 6 in 9iuy

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Iron binding site 3 out of 6 in the Cryo-Em Structure of Mouse Heavy-Chain Apoferritin Resolved at 1.51 Angstroms


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Cryo-Em Structure of Mouse Heavy-Chain Apoferritin Resolved at 1.51 Angstroms within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe203

b:21.4
occ:1.00
 NE2 F:HIS173 3.1 6.9 1.0
NE2 U:HIS173 3.1 6.9 1.0
NE2 C:HIS173 3.1 6.9 1.0
NE2 V:HIS173 3.1 6.9 1.0
CE1 F:HIS173 3.9 3.9 1.0
CE1 C:HIS173 3.9 3.9 1.0
CE1 U:HIS173 3.9 3.9 1.0
CE1 V:HIS173 3.9 3.9 1.0
CD2 C:LEU169 4.0 1.5 1.0
CD2 V:LEU169 4.0 1.5 1.0
CD2 F:LEU169 4.0 1.5 1.0
CD2 U:LEU169 4.0 1.5 1.0
CD2 C:HIS173 4.1 2.2 1.0
CD2 F:HIS173 4.1 2.2 1.0
CD2 U:HIS173 4.1 2.2 1.0
CD2 V:HIS173 4.1 2.2 1.0
CD1 V:LEU169 4.7 1.1 1.0
CD1 C:LEU169 4.7 1.1 1.0
CD1 F:LEU169 4.7 1.1 1.0
CD1 U:LEU169 4.7 1.1 1.0
CG C:LEU169 4.9 0.0 1.0
CG V:LEU169 4.9 0.0 1.0
CG F:LEU169 4.9 0.0 1.0
CG U:LEU169 4.9 0.0 1.0

Iron binding site 4 out of 6 in 9iuy

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Iron binding site 4 out of 6 in the Cryo-Em Structure of Mouse Heavy-Chain Apoferritin Resolved at 1.51 Angstroms


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Cryo-Em Structure of Mouse Heavy-Chain Apoferritin Resolved at 1.51 Angstroms within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Fe203

b:21.4
occ:1.00
 NE2 E:HIS173 3.1 6.9 1.0
NE2 T:HIS173 3.1 6.9 1.0
NE2 X:HIS173 3.1 6.9 1.0
NE2 W:HIS173 3.1 6.9 1.0
CE1 T:HIS173 3.9 3.9 1.0
CE1 E:HIS173 3.9 3.9 1.0
CE1 X:HIS173 3.9 3.9 1.0
CE1 W:HIS173 3.9 3.9 1.0
CD2 W:LEU169 4.0 1.5 1.0
CD2 E:LEU169 4.0 1.5 1.0
CD2 T:LEU169 4.0 1.5 1.0
CD2 X:LEU169 4.0 1.5 1.0
CD2 E:HIS173 4.1 2.2 1.0
CD2 T:HIS173 4.1 2.2 1.0
CD2 X:HIS173 4.1 2.2 1.0
CD2 W:HIS173 4.1 2.2 1.0
CD1 W:LEU169 4.7 1.1 1.0
CD1 T:LEU169 4.7 1.1 1.0
CD1 E:LEU169 4.7 1.1 1.0
CD1 X:LEU169 4.7 1.1 1.0
CG W:LEU169 4.9 0.0 1.0
CG E:LEU169 4.9 0.0 1.0
CG T:LEU169 4.9 0.0 1.0
CG X:LEU169 4.9 0.0 1.0

Iron binding site 5 out of 6 in 9iuy

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Iron binding site 5 out of 6 in the Cryo-Em Structure of Mouse Heavy-Chain Apoferritin Resolved at 1.51 Angstroms


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Cryo-Em Structure of Mouse Heavy-Chain Apoferritin Resolved at 1.51 Angstroms within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Fe203

b:20.7
occ:1.00
 NE2 L:HIS173 3.1 6.9 1.0
NE2 M:HIS173 3.1 6.9 1.0
NE2 N:HIS173 3.1 6.9 1.0
NE2 O:HIS173 3.1 6.9 1.0
CE1 L:HIS173 3.9 3.9 1.0
CE1 M:HIS173 3.9 3.9 1.0
CE1 N:HIS173 3.9 3.9 1.0
CE1 O:HIS173 3.9 3.9 1.0
CD2 L:LEU169 4.0 1.5 1.0
CD2 M:LEU169 4.0 1.5 1.0
CD2 N:LEU169 4.0 1.5 1.0
CD2 O:LEU169 4.0 1.5 1.0
CD2 L:HIS173 4.1 2.2 1.0
CD2 M:HIS173 4.1 2.2 1.0
CD2 N:HIS173 4.1 2.2 1.0
CD2 O:HIS173 4.1 2.2 1.0
CD1 L:LEU169 4.7 1.1 1.0
CD1 N:LEU169 4.7 1.1 1.0
CD1 M:LEU169 4.7 1.1 1.0
CD1 O:LEU169 4.7 1.1 1.0
CG N:LEU169 4.9 0.0 1.0
CG O:LEU169 4.9 0.0 1.0
CG L:LEU169 4.9 0.0 1.0
CG M:LEU169 4.9 0.0 1.0

Iron binding site 6 out of 6 in 9iuy

Go back to Iron Binding Sites List in 9iuy
Iron binding site 6 out of 6 in the Cryo-Em Structure of Mouse Heavy-Chain Apoferritin Resolved at 1.51 Angstroms


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Cryo-Em Structure of Mouse Heavy-Chain Apoferritin Resolved at 1.51 Angstroms within 5.0Å range:
probe atom residue distance (Å) B Occ
P:Fe203

b:20.8
occ:1.00
 NE2 P:HIS173 3.1 6.9 1.0
NE2 Q:HIS173 3.1 6.9 1.0
NE2 S:HIS173 3.1 6.9 1.0
NE2 R:HIS173 3.1 6.9 1.0
CE1 Q:HIS173 3.9 3.9 1.0
CE1 P:HIS173 3.9 3.9 1.0
CE1 S:HIS173 3.9 3.9 1.0
CE1 R:HIS173 3.9 3.9 1.0
CD2 P:LEU169 4.0 1.5 1.0
CD2 R:LEU169 4.0 1.5 1.0
CD2 Q:LEU169 4.0 1.5 1.0
CD2 S:LEU169 4.0 1.5 1.0
CD2 P:HIS173 4.1 2.2 1.0
CD2 Q:HIS173 4.1 2.2 1.0
CD2 R:HIS173 4.1 2.2 1.0
CD2 S:HIS173 4.1 2.2 1.0
CD1 R:LEU169 4.7 1.1 1.0
CD1 P:LEU169 4.7 1.1 1.0
CD1 Q:LEU169 4.7 1.1 1.0
CD1 S:LEU169 4.7 1.1 1.0
CG R:LEU169 4.9 0.0 1.0
CG P:LEU169 4.9 0.0 1.0
CG Q:LEU169 4.9 0.0 1.0
CG S:LEU169 4.9 0.0 1.0

Reference:

C.H.Wang, K.P.Wu, Y.C.Chang. Cryo-Em Structure of Mouse Heavy-Chain Apoferritin Resolved at 1.51 Angstroms To Be Published.
Page generated: Sat Sep 28 21:55:03 2024

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