Iron in PDB 9jdb: Structure of Chanoclavine Synthase From Claviceps Fusiformis
Iron Binding Sites:
The binding sites of Iron atom in the Structure of Chanoclavine Synthase From Claviceps Fusiformis
(pdb code 9jdb). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the
Structure of Chanoclavine Synthase From Claviceps Fusiformis, PDB code: 9jdb:
Jump to Iron binding site number:
1;
2;
Iron binding site 1 out
of 2 in 9jdb
Go back to
Iron Binding Sites List in 9jdb
Iron binding site 1 out
of 2 in the Structure of Chanoclavine Synthase From Claviceps Fusiformis
![](/pictures/FE/pdb/jd/9jdb-FE-sphere_01.jpg) Mono view
![](/pictures/FE/pdb/jd/9jdb-FE-sphere_01_stereo.jpg) Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Structure of Chanoclavine Synthase From Claviceps Fusiformis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe501
b:50.5
occ:1.00
|
FE
|
A:HEM501
|
0.0
|
50.5
|
1.0
|
OH
|
A:TYR343
|
2.0
|
17.3
|
1.0
|
ND
|
A:HEM501
|
2.1
|
28.3
|
1.0
|
NA
|
A:HEM501
|
2.1
|
17.5
|
1.0
|
NB
|
A:HEM501
|
2.1
|
21.5
|
1.0
|
NC
|
A:HEM501
|
2.1
|
24.9
|
1.0
|
C4C
|
A:HEM501
|
3.0
|
27.8
|
1.0
|
C1D
|
A:HEM501
|
3.0
|
25.1
|
1.0
|
C1B
|
A:HEM501
|
3.0
|
15.8
|
1.0
|
C4A
|
A:HEM501
|
3.0
|
15.9
|
1.0
|
C1C
|
A:HEM501
|
3.1
|
24.9
|
1.0
|
C4B
|
A:HEM501
|
3.1
|
19.6
|
1.0
|
C4D
|
A:HEM501
|
3.1
|
22.3
|
1.0
|
C1A
|
A:HEM501
|
3.1
|
21.1
|
1.0
|
CZ
|
A:TYR343
|
3.2
|
18.9
|
1.0
|
CHD
|
A:HEM501
|
3.4
|
22.8
|
1.0
|
CHB
|
A:HEM501
|
3.4
|
17.4
|
1.0
|
CHC
|
A:HEM501
|
3.5
|
22.4
|
1.0
|
CHA
|
A:HEM501
|
3.5
|
19.5
|
1.0
|
CE1
|
A:TYR343
|
3.9
|
15.7
|
1.0
|
CE2
|
A:TYR343
|
4.1
|
20.8
|
1.0
|
NH1
|
A:ARG339
|
4.1
|
15.7
|
1.0
|
C3C
|
A:HEM501
|
4.2
|
29.4
|
1.0
|
C2C
|
A:HEM501
|
4.2
|
21.1
|
1.0
|
C2B
|
A:HEM501
|
4.3
|
23.0
|
1.0
|
C2D
|
A:HEM501
|
4.3
|
24.4
|
1.0
|
C3A
|
A:HEM501
|
4.3
|
21.6
|
1.0
|
CD
|
A:ARG339
|
4.3
|
10.9
|
1.0
|
C3B
|
A:HEM501
|
4.3
|
20.7
|
1.0
|
C3D
|
A:HEM501
|
4.3
|
21.1
|
1.0
|
C2A
|
A:HEM501
|
4.3
|
20.3
|
1.0
|
CG2
|
A:VAL52
|
4.5
|
19.8
|
1.0
|
CZ
|
A:PHE139
|
5.0
|
18.6
|
1.0
|
|
Iron binding site 2 out
of 2 in 9jdb
Go back to
Iron Binding Sites List in 9jdb
Iron binding site 2 out
of 2 in the Structure of Chanoclavine Synthase From Claviceps Fusiformis
![](/pictures/FE/pdb/jd/9jdb-FE-sphere_02.jpg) Mono view
![](/pictures/FE/pdb/jd/9jdb-FE-sphere_02_stereo.jpg) Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Structure of Chanoclavine Synthase From Claviceps Fusiformis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe501
b:48.6
occ:1.00
|
FE
|
B:HEM501
|
0.0
|
48.6
|
1.0
|
OH
|
B:TYR343
|
2.0
|
15.0
|
1.0
|
ND
|
B:HEM501
|
2.1
|
28.7
|
1.0
|
NA
|
B:HEM501
|
2.1
|
18.7
|
1.0
|
NB
|
B:HEM501
|
2.1
|
21.9
|
1.0
|
NC
|
B:HEM501
|
2.1
|
23.8
|
1.0
|
C4C
|
B:HEM501
|
3.0
|
26.5
|
1.0
|
C1D
|
B:HEM501
|
3.0
|
25.3
|
1.0
|
C1B
|
B:HEM501
|
3.0
|
18.8
|
1.0
|
C4A
|
B:HEM501
|
3.0
|
17.3
|
1.0
|
C1C
|
B:HEM501
|
3.1
|
25.7
|
1.0
|
C4B
|
B:HEM501
|
3.1
|
18.5
|
1.0
|
C4D
|
B:HEM501
|
3.1
|
19.5
|
1.0
|
C1A
|
B:HEM501
|
3.1
|
20.4
|
1.0
|
CZ
|
B:TYR343
|
3.1
|
16.7
|
1.0
|
CHD
|
B:HEM501
|
3.4
|
23.4
|
1.0
|
CHB
|
B:HEM501
|
3.4
|
19.0
|
1.0
|
CHC
|
B:HEM501
|
3.5
|
22.2
|
1.0
|
CHA
|
B:HEM501
|
3.5
|
18.0
|
1.0
|
CE1
|
B:TYR343
|
3.8
|
15.1
|
1.0
|
CE2
|
B:TYR343
|
4.1
|
19.9
|
1.0
|
C3C
|
B:HEM501
|
4.2
|
29.1
|
1.0
|
NH1
|
B:ARG339
|
4.2
|
15.3
|
1.0
|
C2C
|
B:HEM501
|
4.2
|
19.9
|
1.0
|
C2B
|
B:HEM501
|
4.3
|
23.6
|
1.0
|
CD
|
B:ARG339
|
4.3
|
8.4
|
1.0
|
C3A
|
B:HEM501
|
4.3
|
20.5
|
1.0
|
C2D
|
B:HEM501
|
4.3
|
23.0
|
1.0
|
C3B
|
B:HEM501
|
4.3
|
20.1
|
1.0
|
C3D
|
B:HEM501
|
4.3
|
20.5
|
1.0
|
C2A
|
B:HEM501
|
4.3
|
17.2
|
1.0
|
CG2
|
B:VAL52
|
4.4
|
18.9
|
1.0
|
CZ
|
B:PHE139
|
4.9
|
18.4
|
1.0
|
|
Reference:
Z.W.Liu,
T.Wang,
X.Li,
P.P.Shen,
J.-W.Huang,
C.-C.Chen,
R.-T.Guo.
Structure of A Catalase From Claviceps Fusiformis To Be Published.
Page generated: Sat Feb 8 19:50:27 2025
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