Iron in PDB 9jdc: Structure of Chanoclavine Synthase From Claviceps Fusiformis in Complex with Prechanoclavine

Iron Binding Sites:

The binding sites of Iron atom in the Structure of Chanoclavine Synthase From Claviceps Fusiformis in Complex with Prechanoclavine (pdb code 9jdc). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Structure of Chanoclavine Synthase From Claviceps Fusiformis in Complex with Prechanoclavine, PDB code: 9jdc:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 9jdc

Go back to Iron Binding Sites List in 9jdc
Iron binding site 1 out of 2 in the Structure of Chanoclavine Synthase From Claviceps Fusiformis in Complex with Prechanoclavine


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Chanoclavine Synthase From Claviceps Fusiformis in Complex with Prechanoclavine within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:43.0
occ:1.00
FE A:HEM501 0.0 43.0 1.0
OH A:TYR343 2.0 21.4 1.0
NA A:HEM501 2.1 21.9 1.0
ND A:HEM501 2.1 29.2 1.0
NC A:HEM501 2.1 28.7 1.0
NB A:HEM501 2.1 27.7 1.0
C4C A:HEM501 3.0 22.6 1.0
C1C A:HEM501 3.1 23.1 1.0
C1D A:HEM501 3.1 19.7 1.0
C4A A:HEM501 3.1 18.9 1.0
C1B A:HEM501 3.1 18.4 1.0
C4B A:HEM501 3.1 18.7 1.0
C1A A:HEM501 3.1 15.3 1.0
C4D A:HEM501 3.1 24.7 1.0
CZ A:TYR343 3.1 19.4 1.0
CHD A:HEM501 3.4 19.9 1.0
CHB A:HEM501 3.4 14.8 1.0
CHC A:HEM501 3.4 25.7 1.0
CHA A:HEM501 3.5 20.5 1.0
CE1 A:TYR343 3.8 18.5 1.0
CE2 A:TYR343 4.0 19.4 1.0
NH1 A:ARG339 4.1 13.7 1.0
C3C A:HEM501 4.2 25.1 1.0
C2C A:HEM501 4.2 20.1 1.0
CD A:ARG339 4.3 22.1 1.0
C2B A:HEM501 4.3 24.0 1.0
C3A A:HEM501 4.3 26.6 1.0
C3B A:HEM501 4.3 20.6 1.0
C2D A:HEM501 4.3 20.4 1.0
C2A A:HEM501 4.3 25.4 1.0
C3D A:HEM501 4.3 22.5 1.0
CG2 A:VAL52 4.6 18.0 1.0
CD2 A:HIS53 5.0 21.0 1.0
CZ A:ARG339 5.0 29.7 1.0

Iron binding site 2 out of 2 in 9jdc

Go back to Iron Binding Sites List in 9jdc
Iron binding site 2 out of 2 in the Structure of Chanoclavine Synthase From Claviceps Fusiformis in Complex with Prechanoclavine


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure of Chanoclavine Synthase From Claviceps Fusiformis in Complex with Prechanoclavine within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe501

b:42.1
occ:1.00
FE B:HEM501 0.0 42.1 1.0
OH B:TYR343 2.0 20.0 1.0
NA B:HEM501 2.1 24.3 1.0
ND B:HEM501 2.1 30.0 1.0
NC B:HEM501 2.1 29.8 1.0
NB B:HEM501 2.1 28.0 1.0
C4C B:HEM501 3.0 23.3 1.0
C1C B:HEM501 3.1 23.1 1.0
C1D B:HEM501 3.1 20.9 1.0
C4A B:HEM501 3.1 19.3 1.0
C1B B:HEM501 3.1 18.4 1.0
C4B B:HEM501 3.1 19.0 1.0
C1A B:HEM501 3.1 15.1 1.0
C4D B:HEM501 3.1 24.2 1.0
CZ B:TYR343 3.1 18.9 1.0
CHD B:HEM501 3.4 21.5 1.0
CHB B:HEM501 3.4 14.1 1.0
CHC B:HEM501 3.4 24.9 1.0
CHA B:HEM501 3.5 19.3 1.0
CE1 B:TYR343 3.8 17.9 1.0
NH1 B:ARG339 4.0 29.2 1.0
CE2 B:TYR343 4.0 20.0 1.0
CD B:ARG339 4.2 18.3 1.0
C3C B:HEM501 4.2 24.0 1.0
C2C B:HEM501 4.2 20.7 1.0
C3A B:HEM501 4.3 27.9 1.0
C2B B:HEM501 4.3 22.6 1.0
C2D B:HEM501 4.3 19.4 1.0
C3B B:HEM501 4.3 19.3 1.0
C2A B:HEM501 4.3 26.0 1.0
C3D B:HEM501 4.3 22.6 1.0
CG2 B:VAL52 4.6 18.2 1.0
CZ B:ARG339 4.8 25.2 1.0
NE B:ARG339 4.9 26.0 1.0
CD2 B:HIS53 5.0 20.9 1.0

Reference:

Z.W.Liu, T.Wang, X.Li, P.P.Shen, J.-W.Huang, C.-C.Chen, R.-T.Guo. Structure of A Catalase From Claviceps Fusiformis in Complex with Mcc To Be Published.
Page generated: Sat Feb 8 19:50:27 2025

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