Iron in PDB 9jp5: Phthalate 3,4-Dioxygenase From Rhodococcus Jostii RHA1
Protein crystallography data
The structure of Phthalate 3,4-Dioxygenase From Rhodococcus Jostii RHA1, PDB code: 9jp5
was solved by
K.A.Kumar,
P.Kumar,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
27.46 /
2.88
|
|
Space group
|
P 63
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
194.599,
194.599,
157.287,
90,
90,
120
|
|
R / Rfree (%)
|
24.7 /
30.6
|
Iron Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
12;
Binding sites:
The binding sites of Iron atom in the Phthalate 3,4-Dioxygenase From Rhodococcus Jostii RHA1
(pdb code 9jp5). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 12 binding sites of Iron where determined in the
Phthalate 3,4-Dioxygenase From Rhodococcus Jostii RHA1, PDB code: 9jp5:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 12 in 9jp5
Go back to
Iron Binding Sites List in 9jp5
Iron binding site 1 out
of 12 in the Phthalate 3,4-Dioxygenase From Rhodococcus Jostii RHA1
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Phthalate 3,4-Dioxygenase From Rhodococcus Jostii RHA1 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe501
b:18.5
occ:1.00
|
FE1
|
A:FES501
|
0.0
|
18.5
|
1.0
|
|
S2
|
A:FES501
|
2.2
|
17.9
|
1.0
|
|
S1
|
A:FES501
|
2.2
|
18.3
|
1.0
|
|
SG
|
A:CYS94
|
2.2
|
22.7
|
1.0
|
|
SG
|
A:CYS74
|
2.4
|
21.3
|
1.0
|
|
FE2
|
A:FES501
|
2.6
|
18.6
|
1.0
|
|
CB
|
A:CYS94
|
3.1
|
24.8
|
1.0
|
|
CB
|
A:CYS74
|
3.2
|
20.1
|
1.0
|
|
CB
|
A:TYR96
|
4.2
|
27.6
|
1.0
|
|
CB
|
A:HIS76
|
4.3
|
21.4
|
1.0
|
|
N
|
A:HIS97
|
4.4
|
23.4
|
1.0
|
|
ND1
|
A:HIS97
|
4.4
|
22.2
|
1.0
|
|
CA
|
A:CYS94
|
4.5
|
25.7
|
1.0
|
|
ND1
|
A:HIS76
|
4.5
|
22.1
|
1.0
|
|
CB
|
A:MET79
|
4.5
|
20.9
|
1.0
|
|
CA
|
A:CYS74
|
4.7
|
19.3
|
1.0
|
|
C
|
A:CYS94
|
4.8
|
24.8
|
1.0
|
|
N
|
A:ARG77
|
4.8
|
29.3
|
1.0
|
|
O
|
A:CYS94
|
4.8
|
25.6
|
1.0
|
|
CG
|
A:HIS76
|
4.9
|
22.0
|
1.0
|
|
N
|
A:TYR96
|
4.9
|
24.8
|
1.0
|
|
CB
|
A:TRP99
|
4.9
|
27.3
|
1.0
|
|
N
|
A:MET79
|
5.0
|
25.4
|
1.0
|
|
CA
|
A:TYR96
|
5.0
|
25.7
|
1.0
|
|
CB
|
A:HIS97
|
5.0
|
22.4
|
1.0
|
|
Iron binding site 2 out
of 12 in 9jp5
Go back to
Iron Binding Sites List in 9jp5
Iron binding site 2 out
of 12 in the Phthalate 3,4-Dioxygenase From Rhodococcus Jostii RHA1
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Phthalate 3,4-Dioxygenase From Rhodococcus Jostii RHA1 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe501
b:18.6
occ:1.00
|
FE2
|
A:FES501
|
0.0
|
18.6
|
1.0
|
|
ND1
|
A:HIS97
|
2.2
|
22.2
|
1.0
|
|
ND1
|
A:HIS76
|
2.2
|
22.1
|
1.0
|
|
S2
|
A:FES501
|
2.2
|
17.9
|
1.0
|
|
S1
|
A:FES501
|
2.2
|
18.3
|
1.0
|
|
FE1
|
A:FES501
|
2.6
|
18.5
|
1.0
|
|
CG
|
A:HIS97
|
3.0
|
22.2
|
1.0
|
|
CG
|
A:HIS76
|
3.1
|
22.0
|
1.0
|
|
CE1
|
A:HIS76
|
3.2
|
22.4
|
1.0
|
|
CB
|
A:HIS97
|
3.2
|
22.4
|
1.0
|
|
CE1
|
A:HIS97
|
3.2
|
20.9
|
1.0
|
|
CB
|
A:HIS76
|
3.4
|
21.4
|
1.0
|
|
N
|
A:HIS97
|
3.8
|
23.4
|
1.0
|
|
CB
|
A:TYR96
|
4.0
|
27.6
|
1.0
|
|
CA
|
A:HIS97
|
4.1
|
24.0
|
1.0
|
|
N
|
A:ARG77
|
4.2
|
29.3
|
1.0
|
|
CD2
|
A:HIS97
|
4.2
|
22.0
|
1.0
|
|
SG
|
A:CYS74
|
4.2
|
21.3
|
1.0
|
|
NE2
|
A:HIS97
|
4.2
|
20.1
|
1.0
|
|
CD2
|
A:HIS76
|
4.3
|
22.5
|
1.0
|
|
NE2
|
A:HIS76
|
4.3
|
23.7
|
1.0
|
|
SG
|
A:CYS94
|
4.4
|
22.7
|
1.0
|
|
CG
|
A:TYR96
|
4.5
|
27.0
|
1.0
|
|
C
|
A:TYR96
|
4.5
|
24.0
|
1.0
|
|
CA
|
A:HIS76
|
4.6
|
22.3
|
1.0
|
|
CD2
|
A:TYR96
|
4.6
|
26.8
|
1.0
|
|
CB
|
A:ARG77
|
4.7
|
37.9
|
1.0
|
|
CG
|
A:ARG77
|
4.8
|
48.9
|
1.0
|
|
C
|
A:HIS76
|
4.8
|
25.9
|
1.0
|
|
CD1
|
A:TRP99
|
4.8
|
28.8
|
1.0
|
|
CA
|
A:TYR96
|
4.9
|
25.7
|
1.0
|
|
C
|
A:HIS97
|
4.9
|
24.8
|
1.0
|
|
NE1
|
A:TRP99
|
4.9
|
26.9
|
1.0
|
|
CA
|
A:ARG77
|
5.0
|
30.9
|
1.0
|
|
Iron binding site 3 out
of 12 in 9jp5
Go back to
Iron Binding Sites List in 9jp5
Iron binding site 3 out
of 12 in the Phthalate 3,4-Dioxygenase From Rhodococcus Jostii RHA1
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Phthalate 3,4-Dioxygenase From Rhodococcus Jostii RHA1 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe502
b:2.1
occ:1.00
|
OD1
|
A:ASP363
|
2.0
|
11.5
|
1.0
|
|
NE2
|
A:HIS203
|
2.0
|
21.1
|
1.0
|
|
NE2
|
A:HIS208
|
2.2
|
19.8
|
1.0
|
|
O
|
A:HOH695
|
2.2
|
0.5
|
1.0
|
|
CG
|
A:ASP363
|
2.6
|
11.5
|
1.0
|
|
OD2
|
A:ASP363
|
2.6
|
12.0
|
1.0
|
|
CE1
|
A:HIS203
|
2.9
|
21.3
|
1.0
|
|
CE1
|
A:HIS208
|
3.1
|
21.0
|
1.0
|
|
CD2
|
A:HIS203
|
3.1
|
20.1
|
1.0
|
|
CD2
|
A:HIS208
|
3.2
|
21.8
|
1.0
|
|
ND2
|
A:ASN196
|
4.0
|
16.8
|
1.0
|
|
ND1
|
A:HIS203
|
4.1
|
20.6
|
1.0
|
|
CB
|
A:ASP363
|
4.1
|
11.2
|
1.0
|
|
CG
|
A:HIS203
|
4.2
|
19.9
|
1.0
|
|
ND1
|
A:HIS208
|
4.2
|
20.7
|
1.0
|
|
CG
|
A:HIS208
|
4.3
|
21.1
|
1.0
|
|
O
|
A:HOH675
|
4.3
|
10.2
|
1.0
|
|
CD2
|
A:PHE359
|
4.7
|
18.4
|
1.0
|
|
OG1
|
A:THR204
|
4.9
|
17.1
|
1.0
|
|
CZ
|
A:PHE353
|
4.9
|
14.8
|
1.0
|
|
CE1
|
A:PHE353
|
4.9
|
14.4
|
1.0
|
|
Iron binding site 4 out
of 12 in 9jp5
Go back to
Iron Binding Sites List in 9jp5
Iron binding site 4 out
of 12 in the Phthalate 3,4-Dioxygenase From Rhodococcus Jostii RHA1
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Phthalate 3,4-Dioxygenase From Rhodococcus Jostii RHA1 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe501
b:13.5
occ:1.00
|
FE1
|
C:FES501
|
0.0
|
13.5
|
1.0
|
|
S2
|
C:FES501
|
2.2
|
13.4
|
1.0
|
|
SG
|
C:CYS94
|
2.2
|
22.0
|
1.0
|
|
S1
|
C:FES501
|
2.2
|
14.8
|
1.0
|
|
SG
|
C:CYS74
|
2.4
|
10.1
|
1.0
|
|
FE2
|
C:FES501
|
2.8
|
13.3
|
1.0
|
|
CB
|
C:CYS94
|
3.1
|
22.3
|
1.0
|
|
CB
|
C:CYS74
|
3.1
|
11.3
|
1.0
|
|
CB
|
C:HIS76
|
4.3
|
21.8
|
1.0
|
|
CB
|
C:TYR96
|
4.3
|
15.6
|
1.0
|
|
N
|
C:HIS97
|
4.4
|
17.0
|
1.0
|
|
CA
|
C:CYS94
|
4.5
|
22.4
|
1.0
|
|
CB
|
C:MET79
|
4.6
|
18.5
|
1.0
|
|
ND1
|
C:HIS76
|
4.6
|
22.2
|
1.0
|
|
CA
|
C:CYS74
|
4.6
|
12.1
|
1.0
|
|
CB
|
C:TRP99
|
4.7
|
18.8
|
1.0
|
|
ND1
|
C:HIS97
|
4.7
|
16.3
|
1.0
|
|
C
|
C:CYS94
|
4.8
|
21.0
|
1.0
|
|
N
|
C:TYR96
|
4.8
|
15.9
|
1.0
|
|
N
|
C:ARG77
|
4.9
|
24.0
|
1.0
|
|
CG
|
C:HIS76
|
4.9
|
23.5
|
1.0
|
|
CG
|
C:TRP99
|
5.0
|
18.6
|
1.0
|
|
CA
|
C:TYR96
|
5.0
|
15.9
|
1.0
|
|
O
|
C:CYS94
|
5.0
|
23.3
|
1.0
|
|
Iron binding site 5 out
of 12 in 9jp5
Go back to
Iron Binding Sites List in 9jp5
Iron binding site 5 out
of 12 in the Phthalate 3,4-Dioxygenase From Rhodococcus Jostii RHA1
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Phthalate 3,4-Dioxygenase From Rhodococcus Jostii RHA1 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe501
b:13.3
occ:1.00
|
FE2
|
C:FES501
|
0.0
|
13.3
|
1.0
|
|
ND1
|
C:HIS76
|
2.2
|
22.2
|
1.0
|
|
S1
|
C:FES501
|
2.2
|
14.8
|
1.0
|
|
S2
|
C:FES501
|
2.2
|
13.4
|
1.0
|
|
ND1
|
C:HIS97
|
2.3
|
16.3
|
1.0
|
|
FE1
|
C:FES501
|
2.8
|
13.5
|
1.0
|
|
CG
|
C:HIS76
|
3.1
|
23.5
|
1.0
|
|
CE1
|
C:HIS76
|
3.2
|
23.3
|
1.0
|
|
CG
|
C:HIS97
|
3.2
|
15.5
|
1.0
|
|
CE1
|
C:HIS97
|
3.3
|
15.3
|
1.0
|
|
CB
|
C:HIS76
|
3.4
|
21.8
|
1.0
|
|
CB
|
C:HIS97
|
3.4
|
16.3
|
1.0
|
|
N
|
C:HIS97
|
3.7
|
17.0
|
1.0
|
|
CB
|
C:TYR96
|
4.1
|
15.6
|
1.0
|
|
CA
|
C:HIS97
|
4.1
|
16.9
|
1.0
|
|
N
|
C:ARG77
|
4.2
|
24.0
|
1.0
|
|
CD2
|
C:HIS76
|
4.3
|
24.2
|
1.0
|
|
NE2
|
C:HIS76
|
4.3
|
25.3
|
1.0
|
|
CD2
|
C:HIS97
|
4.3
|
15.3
|
1.0
|
|
NE2
|
C:HIS97
|
4.3
|
15.3
|
1.0
|
|
CG
|
C:TYR96
|
4.4
|
15.7
|
1.0
|
|
SG
|
C:CYS74
|
4.4
|
10.1
|
1.0
|
|
CD2
|
C:TYR96
|
4.4
|
15.6
|
1.0
|
|
C
|
C:TYR96
|
4.5
|
16.4
|
1.0
|
|
SG
|
C:CYS94
|
4.5
|
22.0
|
1.0
|
|
CA
|
C:HIS76
|
4.6
|
21.3
|
1.0
|
|
CB
|
C:ARG77
|
4.6
|
31.4
|
1.0
|
|
C
|
C:HIS76
|
4.8
|
22.6
|
1.0
|
|
CA
|
C:TYR96
|
4.8
|
15.9
|
1.0
|
|
C
|
C:HIS97
|
4.9
|
18.1
|
1.0
|
|
CD1
|
C:TRP99
|
4.9
|
18.4
|
1.0
|
|
CG
|
C:ARG77
|
4.9
|
39.0
|
1.0
|
|
CA
|
C:ARG77
|
5.0
|
26.4
|
1.0
|
|
Iron binding site 6 out
of 12 in 9jp5
Go back to
Iron Binding Sites List in 9jp5
Iron binding site 6 out
of 12 in the Phthalate 3,4-Dioxygenase From Rhodococcus Jostii RHA1
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Phthalate 3,4-Dioxygenase From Rhodococcus Jostii RHA1 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe502
b:4.3
occ:1.00
|
OD1
|
C:ASP363
|
1.8
|
12.7
|
1.0
|
|
NE2
|
C:HIS203
|
2.2
|
29.0
|
1.0
|
|
NE2
|
C:HIS208
|
2.2
|
20.6
|
1.0
|
|
O
|
C:HOH696
|
2.3
|
0.5
|
1.0
|
|
CG
|
C:ASP363
|
2.6
|
13.4
|
1.0
|
|
OD2
|
C:ASP363
|
2.7
|
14.1
|
1.0
|
|
CE1
|
C:HIS208
|
3.1
|
20.4
|
1.0
|
|
CE1
|
C:HIS203
|
3.1
|
27.4
|
1.0
|
|
CD2
|
C:HIS203
|
3.2
|
27.7
|
1.0
|
|
CD2
|
C:HIS208
|
3.3
|
23.7
|
1.0
|
|
ND2
|
C:ASN196
|
4.0
|
15.3
|
1.0
|
|
CB
|
C:ASP363
|
4.0
|
13.0
|
1.0
|
|
O
|
C:HOH651
|
4.1
|
16.1
|
1.0
|
|
ND1
|
C:HIS203
|
4.3
|
26.1
|
1.0
|
|
ND1
|
C:HIS208
|
4.3
|
21.0
|
1.0
|
|
CG
|
C:HIS203
|
4.3
|
26.2
|
1.0
|
|
CG
|
C:HIS208
|
4.4
|
22.8
|
1.0
|
|
CD2
|
C:PHE359
|
4.8
|
16.4
|
1.0
|
|
CA
|
C:ASP363
|
4.9
|
12.8
|
1.0
|
|
CE2
|
C:PHE353
|
5.0
|
16.6
|
1.0
|
|
Iron binding site 7 out
of 12 in 9jp5
Go back to
Iron Binding Sites List in 9jp5
Iron binding site 7 out
of 12 in the Phthalate 3,4-Dioxygenase From Rhodococcus Jostii RHA1
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Phthalate 3,4-Dioxygenase From Rhodococcus Jostii RHA1 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe501
b:19.3
occ:1.00
|
FE1
|
E:FES501
|
0.0
|
19.3
|
1.0
|
|
ND1
|
E:HIS97
|
2.0
|
22.1
|
1.0
|
|
S2
|
E:FES501
|
2.2
|
18.8
|
1.0
|
|
S1
|
E:FES501
|
2.2
|
16.6
|
1.0
|
|
ND1
|
E:HIS76
|
2.5
|
18.4
|
1.0
|
|
FE2
|
E:FES501
|
2.8
|
19.0
|
1.0
|
|
CE1
|
E:HIS97
|
2.9
|
21.9
|
1.0
|
|
CG
|
E:HIS97
|
3.0
|
23.2
|
1.0
|
|
CE1
|
E:HIS76
|
3.3
|
18.3
|
1.0
|
|
CG
|
E:HIS76
|
3.4
|
18.6
|
1.0
|
|
CB
|
E:HIS97
|
3.4
|
24.8
|
1.0
|
|
CB
|
E:HIS76
|
3.6
|
19.0
|
1.0
|
|
CB
|
E:TYR96
|
3.9
|
19.8
|
1.0
|
|
N
|
E:HIS97
|
3.9
|
23.4
|
1.0
|
|
NE2
|
E:HIS97
|
4.0
|
21.2
|
1.0
|
|
CD2
|
E:HIS97
|
4.1
|
23.7
|
1.0
|
|
N
|
E:ARG77
|
4.1
|
24.2
|
1.0
|
|
CG
|
E:TYR96
|
4.2
|
18.8
|
1.0
|
|
CA
|
E:HIS97
|
4.3
|
24.9
|
1.0
|
|
CD2
|
E:TYR96
|
4.3
|
17.7
|
1.0
|
|
NE2
|
E:HIS76
|
4.4
|
20.0
|
1.0
|
|
CD2
|
E:HIS76
|
4.4
|
18.8
|
1.0
|
|
CB
|
E:ARG77
|
4.4
|
34.1
|
1.0
|
|
SG
|
E:CYS74
|
4.5
|
21.3
|
1.0
|
|
SG
|
E:CYS94
|
4.5
|
23.2
|
1.0
|
|
C
|
E:TYR96
|
4.6
|
20.5
|
1.0
|
|
CG
|
E:ARG77
|
4.7
|
43.5
|
1.0
|
|
CA
|
E:HIS76
|
4.7
|
19.6
|
1.0
|
|
C
|
E:HIS76
|
4.8
|
21.4
|
1.0
|
|
CA
|
E:TYR96
|
4.8
|
19.7
|
1.0
|
|
CA
|
E:ARG77
|
4.9
|
27.3
|
1.0
|
|
CD1
|
E:TYR96
|
4.9
|
19.1
|
1.0
|
|
CD1
|
E:TRP99
|
5.0
|
23.6
|
1.0
|
|
Iron binding site 8 out
of 12 in 9jp5
Go back to
Iron Binding Sites List in 9jp5
Iron binding site 8 out
of 12 in the Phthalate 3,4-Dioxygenase From Rhodococcus Jostii RHA1
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Phthalate 3,4-Dioxygenase From Rhodococcus Jostii RHA1 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe501
b:19.0
occ:1.00
|
FE2
|
E:FES501
|
0.0
|
19.0
|
1.0
|
|
SG
|
E:CYS94
|
2.2
|
23.2
|
1.0
|
|
S1
|
E:FES501
|
2.2
|
16.6
|
1.0
|
|
S2
|
E:FES501
|
2.2
|
18.8
|
1.0
|
|
SG
|
E:CYS74
|
2.4
|
21.3
|
1.0
|
|
FE1
|
E:FES501
|
2.8
|
19.3
|
1.0
|
|
CB
|
E:CYS94
|
3.1
|
24.1
|
1.0
|
|
CB
|
E:CYS74
|
3.3
|
17.1
|
1.0
|
|
CB
|
E:TYR96
|
4.2
|
19.8
|
1.0
|
|
CB
|
E:HIS76
|
4.4
|
19.0
|
1.0
|
|
ND1
|
E:HIS97
|
4.4
|
22.1
|
1.0
|
|
N
|
E:HIS97
|
4.5
|
23.4
|
1.0
|
|
CA
|
E:CYS94
|
4.5
|
24.7
|
1.0
|
|
CB
|
E:MET79
|
4.6
|
21.6
|
1.0
|
|
ND1
|
E:HIS76
|
4.6
|
18.4
|
1.0
|
|
CB
|
E:TRP99
|
4.7
|
23.6
|
1.0
|
|
CA
|
E:CYS74
|
4.7
|
16.4
|
1.0
|
|
C
|
E:CYS94
|
4.9
|
22.4
|
1.0
|
|
N
|
E:ARG77
|
4.9
|
24.2
|
1.0
|
|
N
|
E:TYR96
|
4.9
|
19.6
|
1.0
|
|
CG
|
E:TRP99
|
4.9
|
23.5
|
1.0
|
|
O
|
E:CYS94
|
5.0
|
21.6
|
1.0
|
|
CA
|
E:TYR96
|
5.0
|
19.7
|
1.0
|
|
Iron binding site 9 out
of 12 in 9jp5
Go back to
Iron Binding Sites List in 9jp5
Iron binding site 9 out
of 12 in the Phthalate 3,4-Dioxygenase From Rhodococcus Jostii RHA1
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of Phthalate 3,4-Dioxygenase From Rhodococcus Jostii RHA1 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe502
b:6.6
occ:1.00
|
OD1
|
E:ASP363
|
2.0
|
10.7
|
1.0
|
|
NE2
|
E:HIS203
|
2.1
|
20.7
|
1.0
|
|
NE2
|
E:HIS208
|
2.1
|
24.1
|
1.0
|
|
O
|
E:HOH679
|
2.5
|
3.3
|
1.0
|
|
OD2
|
E:ASP363
|
2.5
|
10.8
|
1.0
|
|
CG
|
E:ASP363
|
2.6
|
10.5
|
1.0
|
|
CE1
|
E:HIS208
|
3.0
|
25.0
|
1.0
|
|
CE1
|
E:HIS203
|
3.0
|
19.9
|
1.0
|
|
CD2
|
E:HIS203
|
3.1
|
21.1
|
1.0
|
|
CD2
|
E:HIS208
|
3.3
|
24.8
|
1.0
|
|
ND2
|
E:ASN196
|
4.0
|
18.4
|
1.0
|
|
CB
|
E:ASP363
|
4.1
|
10.7
|
1.0
|
|
ND1
|
E:HIS208
|
4.2
|
25.6
|
1.0
|
|
ND1
|
E:HIS203
|
4.2
|
19.7
|
1.0
|
|
CG
|
E:HIS203
|
4.2
|
20.6
|
1.0
|
|
CG
|
E:HIS208
|
4.3
|
24.8
|
1.0
|
|
CD2
|
E:PHE359
|
4.8
|
16.4
|
1.0
|
|
CA
|
E:ASP363
|
4.9
|
11.0
|
1.0
|
|
CG
|
E:ASN196
|
5.0
|
18.5
|
1.0
|
|
Iron binding site 10 out
of 12 in 9jp5
Go back to
Iron Binding Sites List in 9jp5
Iron binding site 10 out
of 12 in the Phthalate 3,4-Dioxygenase From Rhodococcus Jostii RHA1
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of Phthalate 3,4-Dioxygenase From Rhodococcus Jostii RHA1 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Fe501
b:9.2
occ:1.00
|
FE1
|
G:FES501
|
0.0
|
9.2
|
1.0
|
|
ND1
|
G:HIS76
|
2.2
|
9.8
|
1.0
|
|
S1
|
G:FES501
|
2.2
|
9.1
|
1.0
|
|
S2
|
G:FES501
|
2.2
|
9.3
|
1.0
|
|
ND1
|
G:HIS97
|
2.3
|
9.1
|
1.0
|
|
FE2
|
G:FES501
|
2.7
|
9.2
|
1.0
|
|
CG
|
G:HIS76
|
3.0
|
10.1
|
1.0
|
|
CE1
|
G:HIS76
|
3.2
|
9.8
|
1.0
|
|
CG
|
G:HIS97
|
3.2
|
9.3
|
1.0
|
|
CE1
|
G:HIS97
|
3.2
|
9.0
|
1.0
|
|
CB
|
G:HIS76
|
3.3
|
10.8
|
1.0
|
|
CB
|
G:HIS97
|
3.5
|
9.6
|
1.0
|
|
N
|
G:ARG77
|
3.8
|
15.9
|
1.0
|
|
N
|
G:HIS97
|
3.9
|
10.4
|
1.0
|
|
CB
|
G:TYR96
|
4.1
|
12.0
|
1.0
|
|
SG
|
G:CYS74
|
4.2
|
6.9
|
1.0
|
|
CD2
|
G:HIS76
|
4.2
|
9.8
|
1.0
|
|
NE2
|
G:HIS76
|
4.2
|
9.8
|
1.0
|
|
CA
|
G:HIS97
|
4.3
|
10.3
|
1.0
|
|
NE2
|
G:HIS97
|
4.3
|
9.1
|
1.0
|
|
CD2
|
G:HIS97
|
4.3
|
9.3
|
1.0
|
|
CB
|
G:ARG77
|
4.3
|
21.6
|
1.0
|
|
CA
|
G:HIS76
|
4.4
|
11.7
|
1.0
|
|
CG
|
G:TYR96
|
4.5
|
11.4
|
1.0
|
|
SG
|
G:CYS94
|
4.5
|
14.5
|
1.0
|
|
CG
|
G:ARG77
|
4.5
|
26.6
|
1.0
|
|
CD2
|
G:TYR96
|
4.5
|
11.3
|
1.0
|
|
C
|
G:HIS76
|
4.5
|
13.6
|
1.0
|
|
CA
|
G:ARG77
|
4.6
|
17.4
|
1.0
|
|
C
|
G:TYR96
|
4.7
|
10.7
|
1.0
|
|
CD1
|
G:TRP99
|
4.9
|
11.7
|
1.0
|
|
CA
|
G:TYR96
|
5.0
|
11.2
|
1.0
|
|
NE1
|
G:TRP99
|
5.0
|
11.6
|
1.0
|
|
Reference:
K.A.Kumar,
K.A.Kumar,
P.Kumar.
N/A N/A.
Page generated: Wed Nov 13 11:08:20 2024
|
