Iron in PDB 10jy: Crystal Structure of Heme Binding Pas Domain From One Component Transcription Factor, FG214 Reduced with Dithionite

The structure of Crystal Structure of Heme Binding Pas Domain From One Component Transcription Factor, FG214 Reduced with Dithionite, PDB code: 10jy was solved by J.J.Siclari, E.A.Isiorho, K.H.Gardner, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.32 / 1.65
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	63.03, 65.21, 105.87, 90, 90, 90
R / Rfree (%)	18.8 / 21.5

The binding sites of Iron atom in the Crystal Structure of Heme Binding Pas Domain From One Component Transcription Factor, FG214 Reduced with Dithionite (pdb code 10jy). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of Heme Binding Pas Domain From One Component Transcription Factor, FG214 Reduced with Dithionite, PDB code: 10jy:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Crystal Structure of Heme Binding Pas Domain From One Component Transcription Factor, FG214 Reduced with Dithionite


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Heme Binding Pas Domain From One Component Transcription Factor, FG214 Reduced with Dithionite within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe201 b:25.8 occ:1.00 FE A:HEM201 0.0 25.8 1.0 NB A:HEM201 2.0 24.7 1.0 ND A:HEM201 2.0 25.4 1.0 NC A:HEM201 2.0 23.7 1.0 NA A:HEM201 2.0 25.1 1.0 NE2 A:HIS87 2.1 27.4 1.0 SD A:MET103 2.4 30.6 1.0 C1B A:HEM201 2.9 24.6 1.0 C4A A:HEM201 3.0 25.6 1.0 C4D A:HEM201 3.0 27.3 1.0 C1A A:HEM201 3.0 26.6 1.0 CD2 A:HIS87 3.0 25.4 1.0 C4B A:HEM201 3.0 27.9 1.0 C1C A:HEM201 3.0 25.7 1.0 C4C A:HEM201 3.0 27.2 1.0 C1D A:HEM201 3.1 29.2 1.0 CE1 A:HIS87 3.1 25.2 1.0 HD2 A:HIS87 3.2 30.5 1.0 HE1 A:HIS87 3.3 30.2 1.0 CHB A:HEM201 3.3 24.4 1.0 HE3 A:MET103 3.4 39.0 1.0 CHA A:HEM201 3.4 26.5 1.0 CE A:MET103 3.4 32.5 1.0 CHC A:HEM201 3.4 26.6 1.0 CHD A:HEM201 3.4 25.5 1.0 HG3 A:MET103 3.5 39.8 1.0 CG A:MET103 3.5 33.1 1.0 HE1 A:MET103 3.6 39.0 1.0 HG2 A:MET103 3.6 39.8 1.0 C2B A:HEM201 4.2 26.3 1.0 ND1 A:HIS87 4.2 28.9 1.0 CG A:HIS87 4.2 27.9 1.0 C3B A:HEM201 4.2 25.6 1.0 C2D A:HEM201 4.2 31.0 1.0 C3D A:HEM201 4.2 28.3 1.0 C3A A:HEM201 4.3 26.6 1.0 C2C A:HEM201 4.3 27.4 1.0 C3C A:HEM201 4.3 27.6 1.0 HE2 A:MET103 4.3 39.0 1.0 C2A A:HEM201 4.3 26.1 1.0 HHB A:HEM201 4.3 29.3 1.0 HHA A:HEM201 4.3 31.9 1.0 HHC A:HEM201 4.4 32.0 1.0 HHD A:HEM201 4.4 30.6 1.0 HD13 A:ILE79 4.4 31.1 1.0 HD11 A:LEU125 4.5 35.8 1.0 HD11 A:ILE79 4.6 31.1 1.0 HD21 A:LEU125 4.8 38.7 1.0 CB A:MET103 4.8 31.7 1.0 CD1 A:ILE79 4.9 25.9 1.0 HD1 A:HIS87 5.0 34.6 1.0 HB2 A:MET103 5.0 38.1 1.0

Iron binding site 2 out of 2 in the Crystal Structure of Heme Binding Pas Domain From One Component Transcription Factor, FG214 Reduced with Dithionite


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of Heme Binding Pas Domain From One Component Transcription Factor, FG214 Reduced with Dithionite within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe201 b:28.6 occ:1.00 FE B:HEM201 0.0 28.6 1.0 NB B:HEM201 2.0 27.6 1.0 NA B:HEM201 2.0 28.9 1.0 ND B:HEM201 2.0 27.4 1.0 NC B:HEM201 2.0 27.7 1.0 NE2 B:HIS87 2.1 26.5 1.0 SD B:MET103 2.4 34.0 1.0 C4B B:HEM201 3.0 28.8 1.0 C1A B:HEM201 3.0 28.6 1.0 C4A B:HEM201 3.0 26.6 1.0 C1C B:HEM201 3.0 29.2 1.0 C1B B:HEM201 3.0 28.9 1.0 C4D B:HEM201 3.0 28.0 1.0 C1D B:HEM201 3.0 28.4 1.0 CD2 B:HIS87 3.0 26.2 1.0 C4C B:HEM201 3.1 26.2 1.0 CE1 B:HIS87 3.1 27.6 1.0 HD2 B:HIS87 3.2 31.4 1.0 HE1 B:HIS87 3.3 33.1 1.0 HE3 B:MET103 3.4 38.8 1.0 CHC B:HEM201 3.4 26.7 1.0 CHA B:HEM201 3.4 29.1 1.0 CE B:MET103 3.4 32.3 1.0 CHB B:HEM201 3.4 27.9 1.0 CHD B:HEM201 3.4 30.0 1.0 HG3 B:MET103 3.5 40.4 1.0 CG B:MET103 3.5 33.6 1.0 HE1 B:MET103 3.5 38.8 1.0 HG2 B:MET103 3.7 40.4 1.0 CG B:HIS87 4.2 29.6 1.0 ND1 B:HIS87 4.2 31.4 1.0 C2A B:HEM201 4.2 30.3 1.0 C3A B:HEM201 4.2 29.1 1.0 C3B B:HEM201 4.2 28.4 1.0 C2B B:HEM201 4.2 25.5 1.0 C2D B:HEM201 4.2 29.2 1.0 HE2 B:MET103 4.3 38.8 1.0 C3D B:HEM201 4.3 29.2 1.0 C2C B:HEM201 4.3 28.3 1.0 C3C B:HEM201 4.3 28.3 1.0 HHA B:HEM201 4.3 35.0 1.0 HHC B:HEM201 4.3 32.0 1.0 HHB B:HEM201 4.4 33.5 1.0 HHD B:HEM201 4.4 36.0 1.0 HD11 B:ILE79 4.4 37.3 1.0 HD11 B:LEU125 4.5 39.3 1.0 HD13 B:ILE79 4.7 37.3 1.0 HD21 B:LEU75 4.8 36.8 1.0 HD21 B:LEU125 4.9 36.1 1.0 CB B:MET103 4.9 33.7 1.0 HG21 B:THR109 4.9 43.9 1.0 HD1 B:HIS87 5.0 37.7 1.0

J.J.Siclari, E.A.Isiorho, K.H.Gardner. Crystal Structure of Heme Binding Pas Domain From One Component Transcription Factor, FG214 To Be Published.