Iron in PDB 13aj: Structure of the Hpii Catalase From Escherichia Coli

All present enzymatic activity of Structure of the Hpii Catalase From Escherichia Coli:
1.11.1.6;

The binding sites of Iron atom in the Structure of the Hpii Catalase From Escherichia Coli (pdb code 13aj). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Structure of the Hpii Catalase From Escherichia Coli, PDB code: 13aj:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in the Structure of the Hpii Catalase From Escherichia Coli


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of the Hpii Catalase From Escherichia Coli within 5.0Å range: probe atom residue distance (Å) B Occ E:Fe801 b:21.7 occ:1.00 FE E:HDD801 0.0 21.7 1.0 OH E:TYR415 1.9 61.5 1.0 ND E:HDD801 1.9 12.8 1.0 NA E:HDD801 2.1 25.8 1.0 NC E:HDD801 2.1 25.5 1.0 NB E:HDD801 2.1 16.1 1.0 C1D E:HDD801 2.9 19.4 1.0 C4D E:HDD801 2.9 23.8 1.0 C1A E:HDD801 3.0 21.5 1.0 C4C E:HDD801 3.0 22.7 1.0 C4B E:HDD801 3.1 23.9 1.0 C4A E:HDD801 3.1 18.5 1.0 C1C E:HDD801 3.1 24.4 1.0 C1B E:HDD801 3.1 20.3 1.0 CZ E:TYR415 3.2 68.5 1.0 CHA E:HDD801 3.3 23.5 1.0 CHD E:HDD801 3.3 22.4 1.0 CHC E:HDD801 3.5 20.3 1.0 CHB E:HDD801 3.5 17.9 1.0 CE2 E:TYR415 3.9 61.6 1.0 CE1 E:TYR415 4.2 68.3 1.0 C3D E:HDD801 4.2 21.2 1.0 C2D E:HDD801 4.3 22.7 1.0 C2A E:HDD801 4.3 21.0 1.0 C3C E:HDD801 4.4 25.3 1.0 C3A E:HDD801 4.4 22.1 1.0 C3B E:HDD801 4.4 18.4 1.0 C2B E:HDD801 4.4 14.0 1.0 C2C E:HDD801 4.4 21.6 1.0 NH1 E:ARG411 4.5 55.0 1.0 CD E:ARG411 4.8 64.8 1.0 CG2 E:VAL127 4.9 52.7 1.0

Iron binding site 2 out of 4 in the Structure of the Hpii Catalase From Escherichia Coli


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure of the Hpii Catalase From Escherichia Coli within 5.0Å range: probe atom residue distance (Å) B Occ F:Fe801 b:21.7 occ:1.00 FE F:HDD801 0.0 21.7 1.0 OH F:TYR415 1.9 61.7 1.0 ND F:HDD801 1.9 12.8 1.0 NA F:HDD801 2.1 25.8 1.0 NC F:HDD801 2.1 25.5 1.0 NB F:HDD801 2.1 16.1 1.0 C1D F:HDD801 2.9 19.4 1.0 C4D F:HDD801 2.9 23.8 1.0 C1A F:HDD801 3.0 21.5 1.0 C4C F:HDD801 3.0 22.7 1.0 C4B F:HDD801 3.1 23.9 1.0 C4A F:HDD801 3.1 18.5 1.0 C1C F:HDD801 3.1 24.4 1.0 C1B F:HDD801 3.1 20.3 1.0 CZ F:TYR415 3.2 67.8 1.0 CHA F:HDD801 3.3 23.5 1.0 CHD F:HDD801 3.3 22.4 1.0 CHC F:HDD801 3.5 20.3 1.0 CHB F:HDD801 3.5 17.9 1.0 CE2 F:TYR415 3.9 61.6 1.0 CE1 F:TYR415 4.2 67.1 1.0 C3D F:HDD801 4.2 21.2 1.0 C2D F:HDD801 4.3 22.7 1.0 C2A F:HDD801 4.3 21.0 1.0 C3C F:HDD801 4.4 25.3 1.0 C3A F:HDD801 4.4 22.1 1.0 C3B F:HDD801 4.4 18.4 1.0 C2B F:HDD801 4.4 14.0 1.0 C2C F:HDD801 4.4 21.6 1.0 NH1 F:ARG411 4.5 55.8 1.0 CD F:ARG411 4.8 65.6 1.0 CG2 F:VAL127 4.9 53.4 1.0

Iron binding site 3 out of 4 in the Structure of the Hpii Catalase From Escherichia Coli


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Structure of the Hpii Catalase From Escherichia Coli within 5.0Å range: probe atom residue distance (Å) B Occ G:Fe801 b:21.7 occ:1.00 FE G:HDD801 0.0 21.7 1.0 OH G:TYR415 1.9 62.0 1.0 ND G:HDD801 1.9 12.8 1.0 NA G:HDD801 2.1 25.8 1.0 NC G:HDD801 2.1 25.5 1.0 NB G:HDD801 2.1 16.1 1.0 C1D G:HDD801 2.9 19.4 1.0 C4D G:HDD801 2.9 23.8 1.0 C1A G:HDD801 3.0 21.5 1.0 C4C G:HDD801 3.0 22.7 1.0 C4B G:HDD801 3.1 23.9 1.0 C4A G:HDD801 3.1 18.5 1.0 C1C G:HDD801 3.1 24.4 1.0 C1B G:HDD801 3.1 20.3 1.0 CZ G:TYR415 3.2 68.4 1.0 CHA G:HDD801 3.3 23.5 1.0 CHD G:HDD801 3.3 22.4 1.0 CHC G:HDD801 3.5 20.3 1.0 CHB G:HDD801 3.5 17.9 1.0 CE2 G:TYR415 3.9 60.9 1.0 CE1 G:TYR415 4.2 67.5 1.0 C3D G:HDD801 4.2 21.2 1.0 C2D G:HDD801 4.3 22.7 1.0 C2A G:HDD801 4.3 21.0 1.0 C3C G:HDD801 4.4 25.3 1.0 C3A G:HDD801 4.4 22.1 1.0 C3B G:HDD801 4.4 18.4 1.0 C2B G:HDD801 4.4 14.0 1.0 C2C G:HDD801 4.4 21.6 1.0 NH1 G:ARG411 4.5 53.6 1.0 CD G:ARG411 4.8 64.2 1.0 CG2 G:VAL127 4.9 51.7 1.0

Iron binding site 4 out of 4 in the Structure of the Hpii Catalase From Escherichia Coli


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Structure of the Hpii Catalase From Escherichia Coli within 5.0Å range: probe atom residue distance (Å) B Occ H:Fe801 b:21.7 occ:1.00 FE H:HDD801 0.0 21.7 1.0 OH H:TYR415 1.9 60.7 1.0 ND H:HDD801 1.9 12.8 1.0 NA H:HDD801 2.1 25.8 1.0 NC H:HDD801 2.1 25.5 1.0 NB H:HDD801 2.1 16.1 1.0 C1D H:HDD801 2.9 19.4 1.0 C4D H:HDD801 2.9 23.8 1.0 C1A H:HDD801 3.0 21.5 1.0 C4C H:HDD801 3.0 22.7 1.0 C4B H:HDD801 3.1 23.9 1.0 C4A H:HDD801 3.1 18.5 1.0 C1C H:HDD801 3.1 24.4 1.0 C1B H:HDD801 3.1 20.3 1.0 CZ H:TYR415 3.2 68.5 1.0 CHA H:HDD801 3.3 23.5 1.0 CHD H:HDD801 3.3 22.4 1.0 CHC H:HDD801 3.5 20.3 1.0 CHB H:HDD801 3.5 17.9 1.0 CE2 H:TYR415 3.9 61.6 1.0 CE1 H:TYR415 4.2 68.5 1.0 C3D H:HDD801 4.2 21.2 1.0 C2D H:HDD801 4.3 22.7 1.0 C2A H:HDD801 4.3 21.0 1.0 C3C H:HDD801 4.4 25.3 1.0 C3A H:HDD801 4.4 22.1 1.0 C3B H:HDD801 4.4 18.4 1.0 C2B H:HDD801 4.4 14.0 1.0 C2C H:HDD801 4.4 21.6 1.0 NH1 H:ARG411 4.5 54.5 1.0 CD H:ARG411 4.8 64.6 1.0 CG2 H:VAL127 4.9 52.4 1.0

J.Iarocci, M.Song, J.Nadeau, M.Wang, M.Hancock, K.H.Bui, S.Guo. Adhesin-Mediated Co-Purification of Escherichia Coli Hpii (Kate) Catalase Revealed Its Cryo-Em Structure To Be Published.