Iron in PDB 13he: Cryoem Structure of Adhe Spirosome From Clostridium Thermocellum Uncovered By Visual Proteomics.

The binding sites of Iron atom in the Cryoem Structure of Adhe Spirosome From Clostridium Thermocellum Uncovered By Visual Proteomics. (pdb code 13he). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 6 binding sites of Iron where determined in the Cryoem Structure of Adhe Spirosome From Clostridium Thermocellum Uncovered By Visual Proteomics., PDB code: 13he:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6;

Iron binding site 1 out of 6 in the Cryoem Structure of Adhe Spirosome From Clostridium Thermocellum Uncovered By Visual Proteomics.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cryoem Structure of Adhe Spirosome From Clostridium Thermocellum Uncovered By Visual Proteomics. within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe901 b:187.1 occ:1.00 NE2 A:HIS730 2.2 156.1 1.0 NE2 A:HIS664 2.3 151.8 1.0 OD1 A:ASP660 2.3 167.8 1.0 OD2 A:ASP660 2.7 167.8 1.0 CG A:ASP660 2.8 167.8 1.0 CE1 A:HIS730 2.9 156.1 1.0 NE2 A:HIS744 3.0 158.8 1.0 CD2 A:HIS664 3.1 151.8 1.0 CD2 A:HIS744 3.2 158.8 1.0 CE1 A:HIS664 3.3 151.8 1.0 CD2 A:HIS730 3.3 156.1 1.0 ND1 A:HIS730 4.1 156.1 1.0 OD1 A:ASN748 4.1 166.8 1.0 CG A:HIS664 4.2 151.8 1.0 CE1 A:HIS744 4.3 158.8 1.0 ND1 A:HIS664 4.3 151.8 1.0 CB A:ASP660 4.3 167.8 1.0 CG A:HIS730 4.3 156.1 1.0 CG A:HIS744 4.5 158.8 1.0 O A:ASP660 4.9 167.8 1.0 CG A:ASN748 5.0 166.8 1.0 ND1 A:HIS744 5.0 158.8 1.0

Iron binding site 2 out of 6 in the Cryoem Structure of Adhe Spirosome From Clostridium Thermocellum Uncovered By Visual Proteomics.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cryoem Structure of Adhe Spirosome From Clostridium Thermocellum Uncovered By Visual Proteomics. within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe901 b:171.2 occ:1.00 NE2 B:HIS730 2.2 150.4 1.0 NE2 B:HIS664 2.3 144.5 1.0 OD1 B:ASP660 2.3 161.6 1.0 OD2 B:ASP660 2.7 161.6 1.0 CG B:ASP660 2.9 161.6 1.0 CE1 B:HIS730 2.9 150.4 1.0 NE2 B:HIS744 2.9 155.1 1.0 CD2 B:HIS744 3.1 155.1 1.0 CD2 B:HIS664 3.1 144.5 1.0 CE1 B:HIS664 3.3 144.5 1.0 CD2 B:HIS730 3.4 150.4 1.0 ND1 B:HIS730 4.1 150.4 1.0 OD1 B:ASN748 4.1 153.2 1.0 CE1 B:HIS744 4.2 155.1 1.0 CG B:HIS664 4.3 144.5 1.0 ND1 B:HIS664 4.3 144.5 1.0 CG B:HIS730 4.3 150.4 1.0 CB B:ASP660 4.4 161.6 1.0 CG B:HIS744 4.4 155.1 1.0 O B:ASP660 4.9 161.6 1.0 ND1 B:HIS744 4.9 155.1 1.0 CG B:ASN748 4.9 153.2 1.0

Iron binding site 3 out of 6 in the Cryoem Structure of Adhe Spirosome From Clostridium Thermocellum Uncovered By Visual Proteomics.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Cryoem Structure of Adhe Spirosome From Clostridium Thermocellum Uncovered By Visual Proteomics. within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe901 b:371.8 occ:1.00 NE2 C:HIS730 2.2 327.4 1.0 OD1 C:ASP660 2.3 356.7 1.0 NE2 C:HIS664 2.4 351.1 1.0 OD2 C:ASP660 2.7 356.7 1.0 CG C:ASP660 2.8 356.7 1.0 CE1 C:HIS730 2.9 327.4 1.0 NE2 C:HIS744 2.9 325.2 1.0 CD2 C:HIS744 3.1 325.2 1.0 CD2 C:HIS664 3.2 351.1 1.0 CD2 C:HIS730 3.3 327.4 1.0 CE1 C:HIS664 3.4 351.1 1.0 ND1 C:HIS730 4.1 327.4 1.0 OD1 C:ASN748 4.2 335.6 1.0 CE1 C:HIS744 4.2 325.2 1.0 CG C:HIS664 4.3 351.1 1.0 CG C:HIS730 4.3 327.4 1.0 CB C:ASP660 4.3 356.7 1.0 ND1 C:HIS664 4.4 351.1 1.0 CG C:HIS744 4.4 325.2 1.0 ND1 C:HIS744 4.9 325.2 1.0 O C:ASP660 4.9 356.7 1.0 CG C:ASN748 5.0 335.6 1.0

Iron binding site 4 out of 6 in the Cryoem Structure of Adhe Spirosome From Clostridium Thermocellum Uncovered By Visual Proteomics.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Cryoem Structure of Adhe Spirosome From Clostridium Thermocellum Uncovered By Visual Proteomics. within 5.0Å range: probe atom residue distance (Å) B Occ D:Fe901 b:179.9 occ:1.00 NE2 D:HIS730 2.2 162.6 1.0 OD1 D:ASP660 2.3 172.4 1.0 NE2 D:HIS664 2.4 156.9 1.0 OD2 D:ASP660 2.7 172.4 1.0 CG D:ASP660 2.9 172.4 1.0 CE1 D:HIS730 2.9 162.6 1.0 NE2 D:HIS744 2.9 174.3 1.0 CD2 D:HIS744 3.1 174.3 1.0 CD2 D:HIS664 3.2 156.9 1.0 CD2 D:HIS730 3.3 162.6 1.0 CE1 D:HIS664 3.4 156.9 1.0 OD1 D:ASN748 4.0 177.1 1.0 ND1 D:HIS730 4.1 162.6 1.0 CE1 D:HIS744 4.2 174.3 1.0 CG D:HIS664 4.3 156.9 1.0 CG D:HIS730 4.3 162.6 1.0 ND1 D:HIS664 4.4 156.9 1.0 CB D:ASP660 4.4 172.4 1.0 CG D:HIS744 4.4 174.3 1.0 ND1 D:HIS744 4.9 174.3 1.0 CG D:ASN748 4.9 177.1 1.0 O D:ASP660 4.9 172.4 1.0

Iron binding site 5 out of 6 in the Cryoem Structure of Adhe Spirosome From Clostridium Thermocellum Uncovered By Visual Proteomics.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Cryoem Structure of Adhe Spirosome From Clostridium Thermocellum Uncovered By Visual Proteomics. within 5.0Å range: probe atom residue distance (Å) B Occ E:Fe901 b:175.6 occ:1.00 NE2 E:HIS730 2.2 155.1 1.0 OD1 E:ASP660 2.3 166.3 1.0 NE2 E:HIS664 2.3 161.5 1.0 OD2 E:ASP660 2.7 166.3 1.0 CG E:ASP660 2.8 166.3 1.0 CE1 E:HIS730 2.9 155.1 1.0 NE2 E:HIS744 3.0 167.8 1.0 CD2 E:HIS664 3.1 161.5 1.0 CD2 E:HIS744 3.1 167.8 1.0 CE1 E:HIS664 3.3 161.5 1.0 CD2 E:HIS730 3.4 155.1 1.0 OD1 E:ASN748 4.1 171.4 1.0 ND1 E:HIS730 4.1 155.1 1.0 CE1 E:HIS744 4.2 167.8 1.0 CG E:HIS664 4.2 161.5 1.0 ND1 E:HIS664 4.3 161.5 1.0 CB E:ASP660 4.3 166.3 1.0 CG E:HIS730 4.4 155.1 1.0 CG E:HIS744 4.4 167.8 1.0 O E:ASP660 4.9 166.3 1.0 ND1 E:HIS744 4.9 167.8 1.0 CG E:ASN748 4.9 171.4 1.0

Iron binding site 6 out of 6 in the Cryoem Structure of Adhe Spirosome From Clostridium Thermocellum Uncovered By Visual Proteomics.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Cryoem Structure of Adhe Spirosome From Clostridium Thermocellum Uncovered By Visual Proteomics. within 5.0Å range: probe atom residue distance (Å) B Occ F:Fe901 b:342.1 occ:1.00 NE2 F:HIS730 2.2 294.7 1.0 OD1 F:ASP660 2.3 338.8 1.0 NE2 F:HIS664 2.3 312.2 1.0 OD2 F:ASP660 2.6 338.8 1.0 CG F:ASP660 2.8 338.8 1.0 CE1 F:HIS730 2.9 294.7 1.0 NE2 F:HIS744 3.1 311.6 1.0 CD2 F:HIS664 3.1 312.2 1.0 CD2 F:HIS744 3.2 311.6 1.0 CE1 F:HIS664 3.3 312.2 1.0 CD2 F:HIS730 3.4 294.7 1.0 OD1 F:ASN748 4.1 311.3 1.0 ND1 F:HIS730 4.1 294.7 1.0 CG F:HIS664 4.3 312.2 1.0 CB F:ASP660 4.3 338.8 1.0 CE1 F:HIS744 4.3 311.6 1.0 ND1 F:HIS664 4.3 312.2 1.0 CG F:HIS730 4.4 294.7 1.0 CG F:HIS744 4.5 311.6 1.0 O F:ASP660 4.8 338.8 1.0 CG F:ASN748 4.9 311.3 1.0 ND1 F:HIS744 5.0 311.6 1.0

M.P.Agdanowski, M.J.Kensil, T.H.Moser, E.Humm, Y.I.Guandique, K.Mason-Chalmers, T.Al-Set, R.R.Ogorzalek Loo, J.E.Evans, R.P.Gunsalus, J.A.Loo, J.A.Rodriguez. Visual Exoproteomics of Clostridium Thermocellum During Anaerobic Biomass-Degradation Identifies Functional Spirosomes. Biorxiv 2026.
ISSN: ISSN 2692-8205
PubMed: 42239438
DOI: 10.64898/2026.05.21.726627