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Iron in PDB 6lco: Crystal Structure of Bovine Lactoperoxidase with Substrates Thiocynate and Iodide Bound at the Distal Heme Side at 1.99 A Resolution.

Enzymatic activity of Crystal Structure of Bovine Lactoperoxidase with Substrates Thiocynate and Iodide Bound at the Distal Heme Side at 1.99 A Resolution.

All present enzymatic activity of Crystal Structure of Bovine Lactoperoxidase with Substrates Thiocynate and Iodide Bound at the Distal Heme Side at 1.99 A Resolution.:
1.11.1.7;

Protein crystallography data

The structure of Crystal Structure of Bovine Lactoperoxidase with Substrates Thiocynate and Iodide Bound at the Distal Heme Side at 1.99 A Resolution., PDB code: 6lco was solved by V.Viswanathan, H.V.Sirohi, G.S.Kushwaha, M.Sinha, P.Kaur, S.Sharma, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.11 / 2.00
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 54.270, 80.441, 76.599, 90.00, 103.20, 90.00
R / Rfree (%) 20.7 / 26.1

Other elements in 6lco:

The structure of Crystal Structure of Bovine Lactoperoxidase with Substrates Thiocynate and Iodide Bound at the Distal Heme Side at 1.99 A Resolution. also contains other interesting chemical elements:

Iodine (I) 16 atoms
Calcium (Ca) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Bovine Lactoperoxidase with Substrates Thiocynate and Iodide Bound at the Distal Heme Side at 1.99 A Resolution. (pdb code 6lco). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Bovine Lactoperoxidase with Substrates Thiocynate and Iodide Bound at the Distal Heme Side at 1.99 A Resolution., PDB code: 6lco:

Iron binding site 1 out of 1 in 6lco

Go back to Iron Binding Sites List in 6lco
Iron binding site 1 out of 1 in the Crystal Structure of Bovine Lactoperoxidase with Substrates Thiocynate and Iodide Bound at the Distal Heme Side at 1.99 A Resolution.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Bovine Lactoperoxidase with Substrates Thiocynate and Iodide Bound at the Distal Heme Side at 1.99 A Resolution. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe601

b:33.8
occ:1.00
 FE A:HEM601 0.0 33.8 1.0
ND A:HEM601 1.9 33.4 1.0
NE2 A:HIS351 2.0 32.0 1.0
NA A:HEM601 2.0 31.7 1.0
NC A:HEM601 2.1 28.3 1.0
NB A:HEM601 2.1 30.9 1.0
O A:HOH848 2.3 46.6 1.0
C4D A:HEM601 2.9 30.6 1.0
C1D A:HEM601 2.9 30.6 1.0
C4C A:HEM601 3.0 31.2 1.0
CD2 A:HIS351 3.0 30.7 1.0
CE1 A:HIS351 3.0 32.6 1.0
C1B A:HEM601 3.0 31.6 1.0
C4B A:HEM601 3.1 31.1 1.0
C1A A:HEM601 3.1 32.3 1.0
C1C A:HEM601 3.1 30.9 1.0
C4A A:HEM601 3.1 36.0 1.0
CHD A:HEM601 3.4 33.6 1.0
CHA A:HEM601 3.4 33.0 1.0
CHC A:HEM601 3.4 29.0 1.0
CHB A:HEM601 3.5 34.5 1.0
ND1 A:HIS351 4.1 32.4 1.0
C2D A:HEM601 4.2 30.2 1.0
CG A:HIS351 4.2 32.1 1.0
C3D A:HEM601 4.2 30.8 1.0
C3C A:HEM601 4.2 31.4 1.0
C2C A:HEM601 4.3 34.2 1.0
C2B A:HEM601 4.3 33.7 1.0
S A:SCN624 4.3 54.0 0.5
C3A A:HEM601 4.3 32.3 1.0
C2A A:HEM601 4.3 32.5 1.0
C3B A:HEM601 4.3 31.1 1.0
NE2 A:GLN105 4.5 29.4 1.0
CD2 A:LEU433 4.7 39.4 1.0
CG A:GLN105 4.9 33.0 1.0

Reference:

V.Viswanathan, H.V.Sirohi, G.S.Kushwaha, M.Sinha, P.Kaur, S.Sharma, T.P.Singh. Crystal Structure of Bovine Lactoperoxidase with Substrates Thiocynate and Iodide Bound at the Distal Heme Side at 1.99 A Resolution. To Be Published.
Page generated: Wed Aug 7 00:51:24 2024

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