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Iron in PDB 1b0b: Hemoglobin I From the Clam Lucina Pectinata, Cyanide Complex at 100 Kelvin

Protein crystallography data

The structure of Hemoglobin I From the Clam Lucina Pectinata, Cyanide Complex at 100 Kelvin, PDB code: 1b0b was solved by C.Rosano, M.Rizzi, P.Ascenzi, M.Bolognesi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.00 / 1.43
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 49.440, 37.950, 41.370, 90.00, 106.19, 90.00
R / Rfree (%) 11.9 / 17

Iron Binding Sites:

The binding sites of Iron atom in the Hemoglobin I From the Clam Lucina Pectinata, Cyanide Complex at 100 Kelvin (pdb code 1b0b). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Hemoglobin I From the Clam Lucina Pectinata, Cyanide Complex at 100 Kelvin, PDB code: 1b0b:

Iron binding site 1 out of 1 in 1b0b

Go back to Iron Binding Sites List in 1b0b
Iron binding site 1 out of 1 in the Hemoglobin I From the Clam Lucina Pectinata, Cyanide Complex at 100 Kelvin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Hemoglobin I From the Clam Lucina Pectinata, Cyanide Complex at 100 Kelvin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe144

b:5.4
occ:1.00
FE A:HEM144 0.0 5.4 1.0
C A:CYN145 1.9 4.8 1.0
NA A:HEM144 2.0 5.3 1.0
ND A:HEM144 2.0 4.6 1.0
NC A:HEM144 2.0 5.2 1.0
NB A:HEM144 2.1 4.5 1.0
NE2 A:HIS96 2.1 5.1 1.0
C1A A:HEM144 3.0 5.8 1.0
C4A A:HEM144 3.0 5.4 1.0
C4B A:HEM144 3.0 5.0 1.0
C1D A:HEM144 3.1 4.5 1.0
C4D A:HEM144 3.1 4.7 1.0
CE1 A:HIS96 3.1 5.3 1.0
C1B A:HEM144 3.1 4.4 1.0
C4C A:HEM144 3.1 5.2 1.0
N A:CYN145 3.1 7.2 1.0
C1C A:HEM144 3.1 5.0 1.0
CD2 A:HIS96 3.1 5.0 1.0
CHC A:HEM144 3.4 5.3 1.0
CHB A:HEM144 3.4 5.4 1.0
CHD A:HEM144 3.5 4.6 1.0
CHA A:HEM144 3.5 5.5 1.0
C2A A:HEM144 4.2 5.2 1.0
ND1 A:HIS96 4.2 5.6 1.0
C3B A:HEM144 4.3 5.2 1.0
CG A:HIS96 4.3 5.3 1.0
C2D A:HEM144 4.3 5.5 1.0
C2B A:HEM144 4.3 4.5 1.0
C3A A:HEM144 4.3 5.6 1.0
C3C A:HEM144 4.3 4.4 1.0
C3D A:HEM144 4.3 5.3 1.0
C2C A:HEM144 4.4 4.4 1.0
OE1 A:GLN64 4.4 11.1 1.0
CE1 A:PHE92 4.7 6.1 1.0
CZ A:PHE43 4.7 7.8 1.0
NH1 A:ARG99 4.8 9.2 1.0

Reference:

M.Bolognesi, C.Rosano, R.Losso, A.Borassi, M.Rizzi, J.B.Wittenberg, A.Boffi, P.Ascenzi. Cyanide Binding to Lucina Pectinata Hemoglobin I and to Sperm Whale Myoglobin: An X-Ray Crystallographic Study. Biophys.J. V. 77 1093 1999.
ISSN: ISSN 0006-3495
PubMed: 10423453
Page generated: Sat Aug 3 02:24:11 2024

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