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Iron in PDB 1cot: X-Ray Structure of the Cytochrome C2 Isolated From Paracoccus Denitrificans Refined to 1.7 Angstroms Resolution

Protein crystallography data

The structure of X-Ray Structure of the Cytochrome C2 Isolated From Paracoccus Denitrificans Refined to 1.7 Angstroms Resolution, PDB code: 1cot was solved by M.M.Benning, T.E.Meyer, H.M.Holden, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.70
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 31.600, 42.100, 81.600, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Iron Binding Sites:

The binding sites of Iron atom in the X-Ray Structure of the Cytochrome C2 Isolated From Paracoccus Denitrificans Refined to 1.7 Angstroms Resolution (pdb code 1cot). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the X-Ray Structure of the Cytochrome C2 Isolated From Paracoccus Denitrificans Refined to 1.7 Angstroms Resolution, PDB code: 1cot:

Iron binding site 1 out of 1 in 1cot

Go back to Iron Binding Sites List in 1cot
Iron binding site 1 out of 1 in the X-Ray Structure of the Cytochrome C2 Isolated From Paracoccus Denitrificans Refined to 1.7 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of X-Ray Structure of the Cytochrome C2 Isolated From Paracoccus Denitrificans Refined to 1.7 Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe130

b:11.1
occ:1.00
FE A:HEM130 0.0 11.1 1.0
NE2 A:HIS19 1.9 9.7 1.0
NC A:HEM130 2.0 10.2 1.0
NA A:HEM130 2.0 8.5 1.0
NB A:HEM130 2.0 10.5 1.0
ND A:HEM130 2.0 11.4 1.0
SD A:MET100 2.4 10.4 1.0
CE1 A:HIS19 2.9 10.4 1.0
CD2 A:HIS19 2.9 9.1 1.0
C1B A:HEM130 3.0 9.5 1.0
C4B A:HEM130 3.0 11.4 1.0
C4D A:HEM130 3.0 13.0 1.0
C4C A:HEM130 3.0 8.2 1.0
C1A A:HEM130 3.0 8.8 1.0
C1D A:HEM130 3.0 9.0 1.0
C1C A:HEM130 3.0 10.5 1.0
C4A A:HEM130 3.0 9.4 1.0
CHA A:HEM130 3.4 9.4 1.0
CHB A:HEM130 3.4 14.0 1.0
CHD A:HEM130 3.4 11.8 1.0
CHC A:HEM130 3.4 9.3 1.0
CG A:MET100 3.4 10.0 1.0
CE A:MET100 3.5 11.6 1.0
ND1 A:HIS19 4.0 8.7 1.0
CG A:HIS19 4.1 9.1 1.0
C3B A:HEM130 4.2 12.9 1.0
C2B A:HEM130 4.2 9.4 1.0
C3D A:HEM130 4.2 8.1 1.0
C2A A:HEM130 4.2 10.5 1.0
C3C A:HEM130 4.2 10.5 1.0
C2C A:HEM130 4.2 10.7 1.0
C2D A:HEM130 4.2 8.7 1.0
C3A A:HEM130 4.2 12.3 1.0
CB A:MET100 4.3 9.8 1.0

Reference:

M.M.Benning, T.E.Meyer, H.M.Holden. X-Ray Structure of the Cytochrome C2 Isolated From Paracoccus Denitrificans Refined to 1.7-A Resolution. Arch.Biochem.Biophys. V. 310 460 1994.
ISSN: ISSN 0003-9861
PubMed: 8179333
DOI: 10.1006/ABBI.1994.1193
Page generated: Wed Jul 16 13:03:28 2025

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