Iron in PDB 1d9y: Neisseria Gonorrhoeae Ferric Binding Protein

The structure of Neisseria Gonorrhoeae Ferric Binding Protein, PDB code: 1d9y was solved by D.E.Mcree, C.M.Bruns, P.A.Williams, T.A.Mietzner, R.Nunn, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	10.00 / 2.20
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	40.583, 111.009, 140.423, 90.00, 90.00, 90.00
R / Rfree (%)	18.5 / 37.7

The binding sites of Iron atom in the Neisseria Gonorrhoeae Ferric Binding Protein (pdb code 1d9y). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Neisseria Gonorrhoeae Ferric Binding Protein, PDB code: 1d9y:

Iron binding site 1 out of 1 in the Neisseria Gonorrhoeae Ferric Binding Protein


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Neisseria Gonorrhoeae Ferric Binding Protein within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe310 b:16.6 occ:1.00 OH A:TYR195 1.8 27.8 1.0 OH A:TYR196 1.9 10.7 1.0 OE1 A:GLU57 2.0 14.7 1.0 O4 A:PO4311 2.1 11.1 1.0 NE2 A:HIS9 2.2 31.4 1.0 O A:HOH460 2.2 14.5 1.0 CZ A:TYR196 2.9 12.6 1.0 CZ A:TYR195 3.0 24.8 1.0 CD A:GLU57 3.0 12.5 1.0 CE1 A:HIS9 3.0 30.4 1.0 CD2 A:HIS9 3.2 31.9 1.0 OE2 A:GLU57 3.4 13.9 1.0 P A:PO4311 3.4 10.9 1.0 CE2 A:TYR196 3.5 13.5 1.0 CE1 A:TYR195 3.5 25.0 1.0 O3 A:PO4311 3.8 7.4 1.0 CE1 A:TYR196 3.8 16.2 1.0 NH1 A:ARG101 3.9 8.6 1.0 OD1 A:ASN193 4.1 28.0 1.0 O1 A:PO4311 4.1 12.1 1.0 ND1 A:HIS9 4.2 28.8 1.0 CE2 A:TYR195 4.2 23.2 1.0 O A:HOH651 4.3 20.2 1.0 ND2 A:ASN175 4.3 18.2 1.0 CG A:HIS9 4.3 28.6 1.0 NH2 A:ARG101 4.3 11.9 1.0 CG A:GLU57 4.4 12.2 1.0 CZ A:ARG101 4.6 8.5 1.0 O2 A:PO4311 4.6 9.7 1.0 CD2 A:TYR196 4.7 10.9 1.0 CD1 A:TYR195 4.9 25.1 1.0 CD1 A:TYR196 5.0 19.4 1.0 CB A:GLU57 5.0 15.7 1.0

D.E.Mcree, C.M.Bruns, P.A.Williams, T.A.Mietzner, R.Nunn. Structural Basis of Iron Uptake in the Pathogen Neisseria Gonorrhoeae To Be Published.