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Iron in PDB 1dt1: Thermus Thermophilus Cytochrome C552 Synthesized By Escherichia Coli

Protein crystallography data

The structure of Thermus Thermophilus Cytochrome C552 Synthesized By Escherichia Coli, PDB code: 1dt1 was solved by J.A.Fee, Y.Chen, M.J.Hill, E.Gomez-Moran, T.Loehr, J.Ai, L.Thony-Meyer, P.A.Williams, E.Stura, V.Sridhar, D.E.Mcree, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.00 / 1.80
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 86.900, 86.900, 31.850, 90.00, 90.00, 120.00
R / Rfree (%) 21 / 26.2

Iron Binding Sites:

The binding sites of Iron atom in the Thermus Thermophilus Cytochrome C552 Synthesized By Escherichia Coli (pdb code 1dt1). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Thermus Thermophilus Cytochrome C552 Synthesized By Escherichia Coli, PDB code: 1dt1:

Iron binding site 1 out of 1 in 1dt1

Go back to Iron Binding Sites List in 1dt1
Iron binding site 1 out of 1 in the Thermus Thermophilus Cytochrome C552 Synthesized By Escherichia Coli


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Thermus Thermophilus Cytochrome C552 Synthesized By Escherichia Coli within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe200

b:9.8
occ:1.00
FE A:HEM200 0.0 9.8 1.0
NE2 A:HIS15 2.0 9.0 1.0
NB A:HEM200 2.0 11.7 1.0
NA A:HEM200 2.1 9.4 1.0
NC A:HEM200 2.1 9.8 1.0
ND A:HEM200 2.1 13.6 1.0
SD A:MET69 2.3 10.5 1.0
CD2 A:HIS15 3.0 13.5 1.0
CE1 A:HIS15 3.0 11.9 1.0
C1B A:HEM200 3.0 13.1 1.0
C4A A:HEM200 3.0 8.3 1.0
C1C A:HEM200 3.0 12.4 1.0
C4B A:HEM200 3.0 8.6 1.0
C4D A:HEM200 3.1 9.5 1.0
C1A A:HEM200 3.1 12.4 1.0
C1D A:HEM200 3.1 10.1 1.0
C4C A:HEM200 3.1 12.7 1.0
CHB A:HEM200 3.3 6.7 1.0
CE A:MET69 3.4 11.3 1.0
CHA A:HEM200 3.4 9.3 1.0
CHC A:HEM200 3.4 7.0 1.0
CHD A:HEM200 3.4 8.3 1.0
CG A:MET69 3.5 8.6 1.0
ND1 A:HIS15 4.1 12.1 1.0
CG A:HIS15 4.1 15.0 1.0
CB A:MET69 4.2 12.7 1.0
C3A A:HEM200 4.2 4.3 1.0
C2A A:HEM200 4.2 5.7 1.0
C2B A:HEM200 4.2 4.8 1.0
C3B A:HEM200 4.2 3.0 1.0
C3D A:HEM200 4.3 13.6 1.0
C2D A:HEM200 4.3 13.4 1.0
C2C A:HEM200 4.3 11.4 1.0
C3C A:HEM200 4.3 10.7 1.0

Reference:

J.A.Fee, Y.Chen, T.R.Todaro, K.L.Bren, K.M.Patel, M.G.Hill, E.Gomez-Moran, T.M.Loehr, J.Ai, L.Thony-Meyer, P.A.Williams, E.Stura, V.Sridhar, D.E.Mcree. Integrity of Thermus Thermophilus Cytochrome C552 Synthesized By Escherichia Coli Cells Expressing the Host-Specific Cytochrome C Maturation Genes, Ccmabcdefgh: Biochemical, Spectral, and Structural Characterization of the Recombinant Protein. Protein Sci. V. 9 2074 2000.
ISSN: ISSN 0961-8368
PubMed: 11152119
Page generated: Wed Jul 16 13:25:24 2025

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