Atomistry » Iron » PDB 1dxt-1ea1 » 1dz6
Atomistry »
  Iron »
    PDB 1dxt-1ea1 »
      1dz6 »

Iron in PDB 1dz6: Ferrous P450CAM From Pseudomonas Putida

Protein crystallography data

The structure of Ferrous P450CAM From Pseudomonas Putida, PDB code: 1dz6 was solved by I.Schlichting, J.Berendzen, K.Chu, A.M.Stock, S.A.Maves, D.E.Benson, R.M.Sweet, D.Ringe, G.A.Petsko, S.G.Sligar, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.00 / 1.90
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 67.800, 62.800, 95.500, 90.00, 90.60, 90.00
R / Rfree (%) 18.8 / 26.8

Other elements in 1dz6:

The structure of Ferrous P450CAM From Pseudomonas Putida also contains other interesting chemical elements:

Potassium (K) 3 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Ferrous P450CAM From Pseudomonas Putida (pdb code 1dz6). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Ferrous P450CAM From Pseudomonas Putida, PDB code: 1dz6:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 1dz6

Go back to Iron Binding Sites List in 1dz6
Iron binding site 1 out of 2 in the Ferrous P450CAM From Pseudomonas Putida


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Ferrous P450CAM From Pseudomonas Putida within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:16.1
occ:1.00
FE A:HEM501 0.0 16.1 1.0
ND A:HEM501 2.0 13.1 1.0
NA A:HEM501 2.0 17.0 1.0
NB A:HEM501 2.0 17.3 1.0
NC A:HEM501 2.1 12.7 1.0
SG A:CYS357 2.3 11.6 1.0
C1C A:HEM501 3.0 11.3 1.0
C4D A:HEM501 3.0 17.5 1.0
C4B A:HEM501 3.0 23.3 1.0
C1A A:HEM501 3.0 17.0 1.0
C4A A:HEM501 3.1 16.6 1.0
C1B A:HEM501 3.1 22.8 1.0
C1D A:HEM501 3.1 15.7 1.0
C4C A:HEM501 3.1 21.2 1.0
CB A:CYS357 3.3 17.9 1.0
CHA A:HEM501 3.4 18.4 1.0
CHC A:HEM501 3.4 14.9 1.0
CHB A:HEM501 3.5 17.9 1.0
CHD A:HEM501 3.5 8.9 1.0
CA A:CYS357 3.9 18.1 1.0
C5 A:CAM502 4.1 21.2 1.0
N A:GLY359 4.2 25.4 1.0
C3D A:HEM501 4.3 11.6 1.0
C3B A:HEM501 4.3 22.5 1.0
C3A A:HEM501 4.3 17.2 1.0
C2C A:HEM501 4.3 18.3 1.0
C2A A:HEM501 4.3 21.4 1.0
C2D A:HEM501 4.3 17.4 1.0
C2B A:HEM501 4.3 20.0 1.0
C3C A:HEM501 4.3 18.8 1.0
N A:LEU358 4.4 17.3 1.0
C A:CYS357 4.4 14.9 1.0
CA A:GLY359 4.7 21.6 1.0
C4 A:CAM502 4.7 18.3 1.0

Iron binding site 2 out of 2 in 1dz6

Go back to Iron Binding Sites List in 1dz6
Iron binding site 2 out of 2 in the Ferrous P450CAM From Pseudomonas Putida


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Ferrous P450CAM From Pseudomonas Putida within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe501

b:13.6
occ:1.00
FE B:HEM501 0.0 13.6 1.0
ND B:HEM501 2.0 14.7 1.0
NB B:HEM501 2.0 7.1 1.0
NA B:HEM501 2.0 12.4 1.0
NC B:HEM501 2.0 24.4 1.0
SG B:CYS357 2.4 11.5 1.0
C1D B:HEM501 3.0 27.4 1.0
C1B B:HEM501 3.0 15.3 1.0
C4B B:HEM501 3.0 10.2 1.0
C4A B:HEM501 3.1 10.2 1.0
C4D B:HEM501 3.1 22.3 1.0
C1C B:HEM501 3.1 20.7 1.0
C4C B:HEM501 3.1 20.3 1.0
C1A B:HEM501 3.1 14.7 1.0
CB B:CYS357 3.3 13.9 1.0
CHB B:HEM501 3.4 14.0 1.0
CHD B:HEM501 3.4 28.4 1.0
CHC B:HEM501 3.4 23.1 1.0
CHA B:HEM501 3.4 11.3 1.0
CA B:CYS357 3.9 14.9 1.0
C5 B:CAM502 4.2 23.1 1.0
C3B B:HEM501 4.2 13.8 1.0
C2B B:HEM501 4.2 19.7 1.0
C2D B:HEM501 4.3 25.9 1.0
C3D B:HEM501 4.3 22.9 1.0
C3A B:HEM501 4.3 12.3 1.0
C3C B:HEM501 4.3 23.2 1.0
C2C B:HEM501 4.3 17.3 1.0
C2A B:HEM501 4.3 12.7 1.0
N B:GLY359 4.3 16.9 1.0
N B:LEU358 4.6 14.2 1.0
C4 B:CAM502 4.6 21.3 1.0
C B:CYS357 4.7 13.8 1.0
CA B:GLY359 4.7 20.3 1.0
C9 B:CAM502 4.9 6.1 1.0

Reference:

I.Schlichting, J.Berendzen, K.Chu, A.M.Stock, S.A.Maves, D.E.Benson, R.M.Sweet, D.Ringe, G.A.Petsko, S.G.Sligar. The Catalytic Pathway of Cytochrome P450CAM at Atomic Resolution Science V. 287 1615 2000.
ISSN: ISSN 0036-8075
PubMed: 10698731
DOI: 10.1126/SCIENCE.287.5458.1615
Page generated: Wed Jul 16 13:32:35 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy