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Iron in PDB 1eqd: Crystal Structure of Nitrophorin 4 Complexed with Cn

Protein crystallography data

The structure of Crystal Structure of Nitrophorin 4 Complexed with Cn, PDB code: 1eqd was solved by A.Weichsel, J.F.Andersen, S.A.Roberts, W.R.Montfort, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 11.00 / 1.60
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 70.036, 42.652, 52.559, 90.00, 94.18, 90.00
R / Rfree (%) 20 / 26

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Nitrophorin 4 Complexed with Cn (pdb code 1eqd). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Nitrophorin 4 Complexed with Cn, PDB code: 1eqd:

Iron binding site 1 out of 1 in 1eqd

Go back to Iron Binding Sites List in 1eqd
Iron binding site 1 out of 1 in the Crystal Structure of Nitrophorin 4 Complexed with Cn


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Nitrophorin 4 Complexed with Cn within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe185

b:13.3
occ:1.00
FE A:HEV185 0.0 13.3 1.0
ND A:HEV185 1.9 13.8 1.0
C A:CYN186 1.9 15.9 1.0
NA A:HEV185 1.9 10.9 1.0
NE2 A:HIS59 1.9 13.8 1.0
NB A:HEV185 2.0 12.8 1.0
NC A:HEV185 2.1 10.4 1.0
CD2 A:HIS59 2.9 7.3 1.0
C4D A:HEV185 2.9 18.7 1.0
C1A A:HEV185 2.9 17.5 1.0
C4A A:HEV185 3.0 12.3 1.0
CE1 A:HIS59 3.0 9.1 1.0
C1B A:HEV185 3.0 14.3 1.0
C1D A:HEV185 3.0 18.2 1.0
C4B A:HEV185 3.0 7.4 1.0
C1C A:HEV185 3.1 11.7 1.0
C4C A:HEV185 3.1 12.5 1.0
N A:CYN186 3.1 15.6 1.0
CHA A:HEV185 3.3 12.8 1.0
CHB A:HEV185 3.4 16.9 1.0
CHC A:HEV185 3.4 15.6 1.0
CHD A:HEV185 3.4 14.8 1.0
CG A:HIS59 4.0 11.0 1.0
ND1 A:HIS59 4.1 9.2 1.0
C3D A:HEV185 4.2 21.9 1.0
C2A A:HEV185 4.2 10.2 1.0
C2D A:HEV185 4.2 23.8 1.0
C3A A:HEV185 4.3 13.1 1.0
C3B A:HEV185 4.3 9.3 1.0
C2B A:HEV185 4.3 12.5 1.0
C2C A:HEV185 4.3 16.4 1.0
C3C A:HEV185 4.4 13.5 1.0
O A:HOH301 4.9 47.1 1.0
O A:HOH216 5.0 21.2 1.0

Reference:

A.Weichsel, J.F.Andersen, S.A.Roberts, W.R.Montfort. Nitric Oxide Binding to Nitrophorin 4 Induces Complete Distal Pocket Burial. Nat.Struct.Biol. V. 7 551 2000.
ISSN: ISSN 1072-8368
PubMed: 10876239
DOI: 10.1038/76769
Page generated: Wed Jul 16 13:50:27 2025

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