Atomistry » Iron » PDB 1gem-1gwe » 1gp5
Atomistry »
  Iron »
    PDB 1gem-1gwe »
      1gp5 »

Iron in PDB 1gp5: Anthocyanidin Synthase From Arabidopsis Thaliana Complexed with Trans-Dihydroquercetin

Enzymatic activity of Anthocyanidin Synthase From Arabidopsis Thaliana Complexed with Trans-Dihydroquercetin

All present enzymatic activity of Anthocyanidin Synthase From Arabidopsis Thaliana Complexed with Trans-Dihydroquercetin:
1.14.11.19;

Protein crystallography data

The structure of Anthocyanidin Synthase From Arabidopsis Thaliana Complexed with Trans-Dihydroquercetin, PDB code: 1gp5 was solved by R.C.Wilmouth, J.J.Turnbull, R.W.D.Welford, I.J.Clifton, A.G.Prescott, C.J.Schofield, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.0 / 2.2
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 62.033, 74.362, 88.109, 90.00, 90.00, 90.00
R / Rfree (%) 20.4 / 23.7

Iron Binding Sites:

The binding sites of Iron atom in the Anthocyanidin Synthase From Arabidopsis Thaliana Complexed with Trans-Dihydroquercetin (pdb code 1gp5). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Anthocyanidin Synthase From Arabidopsis Thaliana Complexed with Trans-Dihydroquercetin, PDB code: 1gp5:

Iron binding site 1 out of 1 in 1gp5

Go back to Iron Binding Sites List in 1gp5
Iron binding site 1 out of 1 in the Anthocyanidin Synthase From Arabidopsis Thaliana Complexed with Trans-Dihydroquercetin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Anthocyanidin Synthase From Arabidopsis Thaliana Complexed with Trans-Dihydroquercetin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe390

b:17.4
occ:1.00
O A:HOH2152 2.2 13.3 1.0
OD2 A:ASP234 2.2 9.6 1.0
O5 A:AKG370 2.3 25.8 1.0
NE2 A:HIS288 2.3 9.6 1.0
O2 A:AKG370 2.3 26.5 1.0
NE2 A:HIS232 2.5 16.5 1.0
C2 A:AKG370 3.1 29.2 1.0
C1 A:AKG370 3.1 32.5 1.0
CG A:ASP234 3.1 14.0 1.0
CE1 A:HIS288 3.3 12.0 1.0
CD2 A:HIS288 3.3 11.2 1.0
OD1 A:ASP234 3.3 15.8 1.0
CE1 A:HIS232 3.4 14.1 1.0
CD2 A:HIS232 3.5 15.6 1.0
O A:HOH2167 4.0 14.4 1.0
O13 A:DQH380 4.2 21.0 1.0
O1 A:AKG370 4.4 36.3 1.0
ND1 A:HIS288 4.4 11.8 1.0
CG A:HIS288 4.4 12.2 1.0
ND1 A:HIS232 4.5 14.5 1.0
C3 A:AKG370 4.5 31.0 1.0
CB A:ASP234 4.5 12.9 1.0
CG A:HIS232 4.6 14.9 1.0
O30 A:DQH380 4.7 19.5 1.0
N A:ASP234 4.9 13.1 1.0
CA A:ASP234 4.9 12.6 1.0
CE2 A:PHE304 4.9 12.8 1.0
C4 A:AKG370 5.0 29.0 1.0

Reference:

R.C.Wilmouth, J.J.Turnbull, R.W.D.Welford, I.J.Clifton, A.G.Prescott, C.J.Schofield. Structure and Mechanism of Anthocyanidin Synthase From Arabidopsis Thaliana. Structure V. 10 93 2002.
ISSN: ISSN 0969-2126
PubMed: 11796114
DOI: 10.1016/S0969-2126(01)00695-5
Page generated: Wed Jul 16 15:02:40 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy