Atomistry » Iron » PDB 1h5g-1hdb » 1han
Atomistry »
  Iron »
    PDB 1h5g-1hdb »
      1han »

Iron in PDB 1han: Crystal Structure of the Biphenyl-Cleaving Extradiol Dioxygenase From A Pcb-Degrading Pseudomonad

Enzymatic activity of Crystal Structure of the Biphenyl-Cleaving Extradiol Dioxygenase From A Pcb-Degrading Pseudomonad

All present enzymatic activity of Crystal Structure of the Biphenyl-Cleaving Extradiol Dioxygenase From A Pcb-Degrading Pseudomonad:
1.13.11.39;

Protein crystallography data

The structure of Crystal Structure of the Biphenyl-Cleaving Extradiol Dioxygenase From A Pcb-Degrading Pseudomonad, PDB code: 1han was solved by S.Han, J.T.Bolin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 7.00 / 1.90
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 122.580, 122.580, 111.360, 90.00, 90.00, 90.00
R / Rfree (%) 16.2 / 19

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of the Biphenyl-Cleaving Extradiol Dioxygenase From A Pcb-Degrading Pseudomonad (pdb code 1han). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of the Biphenyl-Cleaving Extradiol Dioxygenase From A Pcb-Degrading Pseudomonad, PDB code: 1han:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 1han

Go back to Iron Binding Sites List in 1han
Iron binding site 1 out of 2 in the Crystal Structure of the Biphenyl-Cleaving Extradiol Dioxygenase From A Pcb-Degrading Pseudomonad


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of the Biphenyl-Cleaving Extradiol Dioxygenase From A Pcb-Degrading Pseudomonad within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe500

b:14.3
occ:1.00
OE1 A:GLU260 2.0 11.3 1.0
O A:HOH3012 2.1 13.3 1.0
NE2 A:HIS146 2.2 11.3 1.0
NE2 A:HIS210 2.3 13.1 1.0
O A:HOH3001 2.4 12.7 1.0
CE1 A:HIS146 3.0 10.6 1.0
CE1 A:HIS210 3.1 15.3 1.0
CD A:GLU260 3.1 9.7 1.0
CD2 A:HIS146 3.3 12.4 1.0
CD2 A:HIS210 3.4 12.8 1.0
OE2 A:GLU260 3.6 13.1 1.0
OH A:TYR250 3.8 13.8 1.0
NE2 A:HIS195 4.0 13.2 1.0
CB A:MET212 4.2 10.0 1.0
ND1 A:HIS146 4.2 11.8 1.0
ND1 A:HIS210 4.3 15.5 1.0
O A:HOH4014 4.3 20.1 1.0
CG A:GLU260 4.4 8.4 1.0
CG A:HIS146 4.4 12.1 1.0
CG A:MET212 4.4 11.3 1.0
CE1 A:HIS195 4.4 12.6 1.0
CG A:HIS210 4.5 13.2 1.0
CB A:GLU260 4.5 10.2 1.0
OD2 A:ASP244 4.7 15.5 1.0
CZ A:TYR250 4.7 13.1 1.0
NE2 A:HIS241 4.8 15.6 1.0
CD2 A:HIS241 4.9 14.0 1.0

Iron binding site 2 out of 2 in 1han

Go back to Iron Binding Sites List in 1han
Iron binding site 2 out of 2 in the Crystal Structure of the Biphenyl-Cleaving Extradiol Dioxygenase From A Pcb-Degrading Pseudomonad


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of the Biphenyl-Cleaving Extradiol Dioxygenase From A Pcb-Degrading Pseudomonad within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:45.4
occ:0.50
NE2 A:HIS189 2.4 15.9 1.0
CE1 A:HIS189 3.3 16.2 1.0
CD2 A:HIS189 3.5 14.9 1.0
CB A:GLN168 4.0 22.3 1.0
O A:HOH8027 4.1 51.3 1.0
CG A:GLN168 4.1 27.6 1.0
ND1 A:HIS189 4.5 15.4 1.0
CG A:HIS189 4.6 15.1 1.0
CG1 A:VAL268 4.7 27.7 1.0

Reference:

S.Han, L.D.Eltis, K.N.Timmis, S.W.Muchmore, J.T.Bolin. Crystal Structure of the Biphenyl-Cleaving Extradiol Dioxygenase From A Pcb-Degrading Pseudomonad. Science V. 270 976 1995.
ISSN: ISSN 0036-8075
PubMed: 7481800
Page generated: Sat Aug 3 07:19:32 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy