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Iron in PDB 1hbz: Catalase From Micrococcus Lysodeikticu

Enzymatic activity of Catalase From Micrococcus Lysodeikticu

All present enzymatic activity of Catalase From Micrococcus Lysodeikticu:
1.11.1.6;

Protein crystallography data

The structure of Catalase From Micrococcus Lysodeikticu, PDB code: 1hbz was solved by G.N.Murshudov, A.I.Grebenko, V.V.Barynin, J.Braningen, K.S.Wilson, Z.Dauter, W.R.Melik-Adamyan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 12.00 / 1.50
Space group P 42 21 2
Cell size a, b, c (Å), α, β, γ (°) 106.700, 106.700, 106.250, 90.00, 90.00, 90.00
R / Rfree (%) 9.2 / 12

Iron Binding Sites:

The binding sites of Iron atom in the Catalase From Micrococcus Lysodeikticu (pdb code 1hbz). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Catalase From Micrococcus Lysodeikticu, PDB code: 1hbz:

Iron binding site 1 out of 1 in 1hbz

Go back to Iron Binding Sites List in 1hbz
Iron binding site 1 out of 1 in the Catalase From Micrococcus Lysodeikticu


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Catalase From Micrococcus Lysodeikticu within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe504

b:6.3
occ:1.00
FE A:HEM504 0.0 6.3 1.0
OH A:TYR343 1.9 7.0 1.0
ND A:HEM504 2.0 4.7 1.0
NC A:HEM504 2.0 4.8 1.0
NB A:HEM504 2.0 5.7 1.0
NA A:HEM504 2.0 4.7 1.0
O A:HOH2534 2.4 14.2 1.0
CZ A:TYR343 2.9 4.9 1.0
C1D A:HEM504 3.0 5.0 1.0
C4C A:HEM504 3.0 6.1 1.0
C1B A:HEM504 3.0 5.1 1.0
C4A A:HEM504 3.0 5.6 1.0
C4D A:HEM504 3.0 5.2 1.0
C1C A:HEM504 3.1 6.6 1.0
C4B A:HEM504 3.1 5.6 1.0
C1A A:HEM504 3.1 5.3 1.0
CHD A:HEM504 3.4 6.5 1.0
CHB A:HEM504 3.4 5.2 1.0
CHA A:HEM504 3.4 5.6 1.0
CHC A:HEM504 3.5 6.5 1.0
CE2 A:TYR343 3.7 6.1 1.0
CE1 A:TYR343 3.8 6.5 1.0
NE A:ARG339 4.1 6.0 1.0
NH2 A:ARG339 4.2 6.8 1.0
O A:HOH2067 4.2 17.3 1.0
C2D A:HEM504 4.2 5.8 1.0
C2B A:HEM504 4.3 5.3 1.0
C3D A:HEM504 4.3 4.8 1.0
C3C A:HEM504 4.3 6.6 1.0
C3A A:HEM504 4.3 5.6 1.0
C3B A:HEM504 4.3 5.8 1.0
C2C A:HEM504 4.3 6.7 1.0
C2A A:HEM504 4.3 5.4 1.0
CZ A:ARG339 4.5 6.0 1.0
NE2 A:HIS61 4.6 6.9 1.0
CZ A:PHE146 4.6 7.7 1.0
CD2 A:HIS61 4.7 6.7 1.0
CD2 A:TYR343 4.9 6.3 1.0
CD A:ARG339 5.0 6.4 1.0
CD1 A:TYR343 5.0 6.9 1.0

Reference:

G.N.Murshudov, W.R.Melik-Adamyan, A.I.Grebenko, V.V.Barynin, A.A.Vagin, B.K.Vainshtein, Z.Dauter, K.S.Wilson. Three-Dimensional Structure of Catalase From Micrococcus Lysodeikticus at 1.5A Resolution Febs Lett. V. 312 127 1992.
ISSN: ISSN 0014-5793
PubMed: 1426241
DOI: 10.1016/0014-5793(92)80919-8
Page generated: Sat Aug 3 07:23:07 2024

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