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Iron in PDB 1hro: Molecular Structure of A High Potential Cytochrome C2 Isolated From Rhodopila Globiformis

Protein crystallography data

The structure of Molecular Structure of A High Potential Cytochrome C2 Isolated From Rhodopila Globiformis, PDB code: 1hro was solved by M.M.Benning, T.E.Meyer, H.M.Holden, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 2.20
Space group I 41
Cell size a, b, c (Å), α, β, γ (°) 79.200, 79.200, 75.200, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Iron Binding Sites:

The binding sites of Iron atom in the Molecular Structure of A High Potential Cytochrome C2 Isolated From Rhodopila Globiformis (pdb code 1hro). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Molecular Structure of A High Potential Cytochrome C2 Isolated From Rhodopila Globiformis, PDB code: 1hro:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 1hro

Go back to Iron Binding Sites List in 1hro
Iron binding site 1 out of 2 in the Molecular Structure of A High Potential Cytochrome C2 Isolated From Rhodopila Globiformis


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Molecular Structure of A High Potential Cytochrome C2 Isolated From Rhodopila Globiformis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe107

b:10.8
occ:1.00
FE A:HEM107 0.0 10.8 1.0
NC A:HEM107 2.0 14.9 1.0
NE2 A:HIS23 2.0 10.4 1.0
NA A:HEM107 2.0 2.6 1.0
ND A:HEM107 2.0 3.9 1.0
NB A:HEM107 2.0 6.3 1.0
SD A:MET84 2.2 13.3 1.0
CE1 A:HIS23 2.8 10.3 1.0
C4D A:HEM107 3.0 10.2 1.0
C1B A:HEM107 3.0 5.6 1.0
C1A A:HEM107 3.0 2.6 1.0
C1C A:HEM107 3.0 11.8 1.0
C4C A:HEM107 3.0 1.0 1.0
C4A A:HEM107 3.0 4.3 1.0
C4B A:HEM107 3.1 8.4 1.0
C1D A:HEM107 3.1 20.5 1.0
CD2 A:HIS23 3.1 13.5 1.0
CHA A:HEM107 3.3 17.1 1.0
CHB A:HEM107 3.4 11.7 1.0
CE A:MET84 3.4 1.0 1.0
CHC A:HEM107 3.4 11.9 1.0
CHD A:HEM107 3.5 1.0 1.0
CG A:MET84 3.5 17.1 1.0
ND1 A:HIS23 3.9 8.6 1.0
CB A:MET84 4.1 32.2 1.0
CG A:HIS23 4.1 6.6 1.0
C3C A:HEM107 4.2 13.5 1.0
C3D A:HEM107 4.2 2.5 1.0
C2A A:HEM107 4.2 4.5 1.0
C3B A:HEM107 4.2 1.0 1.0
C2C A:HEM107 4.2 11.5 1.0
C2B A:HEM107 4.2 17.4 1.0
C3A A:HEM107 4.2 1.3 1.0
C2D A:HEM107 4.3 7.7 1.0
OH A:TYR71 4.7 12.1 1.0

Iron binding site 2 out of 2 in 1hro

Go back to Iron Binding Sites List in 1hro
Iron binding site 2 out of 2 in the Molecular Structure of A High Potential Cytochrome C2 Isolated From Rhodopila Globiformis


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Molecular Structure of A High Potential Cytochrome C2 Isolated From Rhodopila Globiformis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe107

b:9.0
occ:1.00
FE B:HEM107 0.0 9.0 1.0
NC B:HEM107 1.9 4.5 1.0
NA B:HEM107 2.0 15.2 1.0
NE2 B:HIS23 2.0 3.2 1.0
ND B:HEM107 2.0 5.2 1.0
NB B:HEM107 2.0 4.3 1.0
SD B:MET84 2.3 11.7 1.0
CE1 B:HIS23 2.9 7.3 1.0
C1C B:HEM107 3.0 22.2 1.0
C4C B:HEM107 3.0 5.7 1.0
C1B B:HEM107 3.0 16.6 1.0
C1A B:HEM107 3.0 7.9 1.0
C1D B:HEM107 3.1 20.9 1.0
C4B B:HEM107 3.1 11.1 1.0
C4D B:HEM107 3.1 13.6 1.0
CD2 B:HIS23 3.1 4.1 1.0
C4A B:HEM107 3.1 10.4 1.0
CHC B:HEM107 3.4 4.7 1.0
CHD B:HEM107 3.4 16.7 1.0
CHA B:HEM107 3.4 1.1 1.0
CHB B:HEM107 3.5 1.0 1.0
CE B:MET84 3.5 7.7 1.0
CG B:MET84 3.6 3.8 1.0
ND1 B:HIS23 4.1 6.1 1.0
CG B:HIS23 4.2 1.0 1.0
C3C B:HEM107 4.2 7.5 1.0
C2C B:HEM107 4.2 10.7 1.0
C3B B:HEM107 4.2 8.7 1.0
C2B B:HEM107 4.2 16.9 1.0
C2A B:HEM107 4.3 2.6 1.0
C2D B:HEM107 4.3 7.4 1.0
C3A B:HEM107 4.3 13.5 1.0
C3D B:HEM107 4.3 6.2 1.0
CB B:MET84 4.4 2.4 1.0
OH B:TYR71 4.8 13.3 1.0

Reference:

M.M.Benning, T.E.Meyer, H.M.Holden. Molecular Structure of A High Potential Cytochrome C2 Isolated From Rhodopila Globiformis. Arch.Biochem.Biophys. V. 333 338 1996.
ISSN: ISSN 0003-9861
PubMed: 8809072
DOI: 10.1006/ABBI.1996.0400
Page generated: Wed Jul 16 16:06:27 2025

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