Iron in PDB 1jpb: Sperm Whale Met-Myoglobin (Low Temperature; High Pressure)

The structure of Sperm Whale Met-Myoglobin (Low Temperature; High Pressure), PDB code: 1jpb was solved by P.Urayama, S.M.Gruner, G.N.Phillips Jr., with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	26.33 / 1.70
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	63.800, 30.700, 34.390, 90.00, 105.61, 90.00
R / Rfree (%)	20.9 / 23.7

The binding sites of Iron atom in the Sperm Whale Met-Myoglobin (Low Temperature; High Pressure) (pdb code 1jpb). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Sperm Whale Met-Myoglobin (Low Temperature; High Pressure), PDB code: 1jpb:

Iron binding site 1 out of 1 in the Sperm Whale Met-Myoglobin (Low Temperature; High Pressure)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Sperm Whale Met-Myoglobin (Low Temperature; High Pressure) within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe200 b:8.5 occ:1.00 FE A:HEM200 0.0 8.5 1.0 NC A:HEM200 2.0 8.1 1.0 NA A:HEM200 2.0 7.4 1.0 NB A:HEM200 2.0 8.5 1.0 ND A:HEM200 2.0 9.4 1.0 O A:HOH316 2.1 4.7 1.0 NE2 A:HIS93 2.2 9.4 1.0 C4C A:HEM200 3.0 8.5 1.0 C1D A:HEM200 3.0 10.2 1.0 C1A A:HEM200 3.0 9.2 1.0 C4D A:HEM200 3.0 9.7 1.0 C4B A:HEM200 3.0 7.7 1.0 C1C A:HEM200 3.0 8.6 1.0 C1B A:HEM200 3.1 7.1 1.0 C4A A:HEM200 3.1 6.9 1.0 CE1 A:HIS93 3.2 12.1 1.0 CD2 A:HIS93 3.2 12.3 1.0 CHD A:HEM200 3.4 8.8 1.0 CHA A:HEM200 3.4 9.7 1.0 CHC A:HEM200 3.4 7.8 1.0 CHB A:HEM200 3.4 6.4 1.0 C3C A:HEM200 4.2 9.3 1.0 NE2 A:HIS64 4.2 10.7 1.0 C2D A:HEM200 4.3 8.2 1.0 C3D A:HEM200 4.3 10.4 1.0 C2C A:HEM200 4.3 9.1 1.0 C3A A:HEM200 4.3 8.9 1.0 C2A A:HEM200 4.3 10.1 1.0 C3B A:HEM200 4.3 8.8 1.0 C2B A:HEM200 4.3 7.2 1.0 ND1 A:HIS93 4.3 12.0 1.0 CG A:HIS93 4.3 11.7 1.0 CG2 A:VAL68 4.7 4.9 1.0 CE1 A:HIS64 4.8 10.4 1.0 CZ A:PHE43 5.0 7.3 1.0

P.Urayama, G.N.Phillips Jr., S.M.Gruner. Probing Substates in Sperm Whale Myoglobin Using High-Pressure Crystallography. Structure V. 10 51 2002.
ISSN: ISSN 0969-2126
PubMed: 11796110
DOI: 10.1016/S0969-2126(01)00699-2