Atomistry » Iron » PDB 1ozr-1pha » 1pfd
Atomistry »
  Iron »
    PDB 1ozr-1pha »
      1pfd »

Iron in PDB 1pfd: The Solution Structure of High Plant Parsley [2FE-2S] Ferredoxin, uc(Nmr), 18 Structures

Enzymatic activity of The Solution Structure of High Plant Parsley [2FE-2S] Ferredoxin, uc(Nmr), 18 Structures

All present enzymatic activity of The Solution Structure of High Plant Parsley [2FE-2S] Ferredoxin, uc(Nmr), 18 Structures:
1.7.7.2;

Iron Binding Sites:

The binding sites of Iron atom in the The Solution Structure of High Plant Parsley [2FE-2S] Ferredoxin, uc(Nmr), 18 Structures (pdb code 1pfd). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the The Solution Structure of High Plant Parsley [2FE-2S] Ferredoxin, uc(Nmr), 18 Structures, PDB code: 1pfd:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 1pfd

Go back to Iron Binding Sites List in 1pfd
Iron binding site 1 out of 2 in the The Solution Structure of High Plant Parsley [2FE-2S] Ferredoxin, uc(Nmr), 18 Structures


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of The Solution Structure of High Plant Parsley [2FE-2S] Ferredoxin, uc(Nmr), 18 Structures within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe97

b:0.0
occ:1.00
FE1 A:FES97 0.0 0.0 1.0
S2 A:FES97 2.2 0.0 1.0
S1 A:FES97 2.2 0.0 1.0
SG A:CYS44 2.3 0.0 1.0
SG A:CYS39 2.3 0.0 1.0
FE2 A:FES97 2.6 0.0 1.0
HB3 A:CYS39 3.3 0.0 1.0
CB A:CYS39 3.4 0.0 1.0
HB2 A:CYS44 3.4 0.0 1.0
H A:GLY42 3.4 0.0 1.0
CB A:CYS44 3.4 0.0 1.0
H A:ALA41 3.5 0.0 1.0
HB3 A:CYS44 3.7 0.0 1.0
O A:CYS39 3.8 0.0 1.0
C A:CYS39 3.9 0.0 1.0
H A:CYS39 3.9 0.0 1.0
H A:SER43 4.0 0.0 1.0
CA A:CYS39 4.0 0.0 1.0
SG A:CYS47 4.1 0.0 1.0
N A:CYS39 4.2 0.0 1.0
HB2 A:CYS39 4.3 0.0 1.0
HA A:ARG40 4.3 0.0 1.0
HB2 A:ALA41 4.3 0.0 1.0
HB2 A:SER38 4.3 0.0 1.0
N A:GLY42 4.4 0.0 1.0
N A:ALA41 4.5 0.0 1.0
HE1 A:HIS78 4.5 0.0 1.0
N A:ARG40 4.5 0.0 1.0
HA2 A:GLY42 4.6 0.0 1.0
SG A:CYS77 4.6 0.0 1.0
CA A:CYS44 4.8 0.0 1.0
H A:SER38 4.8 0.0 1.0
H A:ARG40 4.9 0.0 1.0
HB3 A:CYS47 4.9 0.0 1.0
CA A:ARG40 4.9 0.0 1.0
N A:SER43 4.9 0.0 1.0
HA A:CYS44 5.0 0.0 1.0
HD23 A:LEU75 5.0 0.0 1.0

Iron binding site 2 out of 2 in 1pfd

Go back to Iron Binding Sites List in 1pfd
Iron binding site 2 out of 2 in the The Solution Structure of High Plant Parsley [2FE-2S] Ferredoxin, uc(Nmr), 18 Structures


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of The Solution Structure of High Plant Parsley [2FE-2S] Ferredoxin, uc(Nmr), 18 Structures within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe97

b:0.0
occ:1.00
FE2 A:FES97 0.0 0.0 1.0
S2 A:FES97 2.2 0.0 1.0
S1 A:FES97 2.2 0.0 1.0
SG A:CYS47 2.3 0.0 1.0
SG A:CYS77 2.4 0.0 1.0
FE1 A:FES97 2.6 0.0 1.0
HB2 A:CYS47 3.1 0.0 1.0
CB A:CYS47 3.1 0.0 1.0
HB3 A:CYS47 3.1 0.0 1.0
HB2 A:CYS77 3.1 0.0 1.0
CB A:CYS77 3.4 0.0 1.0
HD23 A:LEU75 3.5 0.0 1.0
O A:CYS39 3.5 0.0 1.0
HB3 A:CYS77 3.8 0.0 1.0
H A:CYS39 3.8 0.0 1.0
H A:SER38 3.9 0.0 1.0
HB2 A:CYS44 4.0 0.0 1.0
HD13 A:LEU75 4.3 0.0 1.0
HA A:ARG40 4.3 0.0 1.0
HG A:LEU75 4.4 0.0 1.0
SG A:CYS44 4.4 0.0 1.0
C A:CYS39 4.4 0.0 1.0
CD2 A:LEU75 4.4 0.0 1.0
HB3 A:CYS44 4.4 0.0 1.0
SG A:CYS39 4.4 0.0 1.0
HE1 A:HIS78 4.5 0.0 1.0
HD1 A:HIS78 4.5 0.0 1.0
CB A:CYS44 4.5 0.0 1.0
HD22 A:LEU75 4.5 0.0 1.0
CA A:CYS47 4.6 0.0 1.0
H A:ALA41 4.6 0.0 1.0
N A:CYS39 4.6 0.0 1.0
HA A:TYR37 4.6 0.0 1.0
CA A:CYS77 4.7 0.0 1.0
H A:GLY42 4.7 0.0 1.0
HB2 A:SER38 4.7 0.0 1.0
H A:CYS77 4.8 0.0 1.0
HA2 A:GLY42 4.8 0.0 1.0
HD2 A:TYR37 4.9 0.0 1.0
CG A:LEU75 4.9 0.0 1.0
N A:CYS77 4.9 0.0 1.0
N A:SER38 4.9 0.0 1.0
O A:CYS47 4.9 0.0 1.0
CA A:CYS39 4.9 0.0 1.0

Reference:

S.C.Im, G.Liu, C.Luchinat, A.G.Sykes, I.Bertini. The Solution Structure of Parsley [2FE-2S]Ferredoxin. Eur.J.Biochem. V. 258 465 1998.
ISSN: ISSN 0014-2956
PubMed: 9874213
DOI: 10.1046/J.1432-1327.1998.2580465.X
Page generated: Sat Aug 3 13:04:00 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy