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Iron in PDB 1suv: Structure of Human Transferrin Receptor-Transferrin Complex

Iron Binding Sites:

The binding sites of Iron atom in the Structure of Human Transferrin Receptor-Transferrin Complex (pdb code 1suv). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Structure of Human Transferrin Receptor-Transferrin Complex, PDB code: 1suv:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in 1suv

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Iron binding site 1 out of 4 in the Structure of Human Transferrin Receptor-Transferrin Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Human Transferrin Receptor-Transferrin Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe339

b:20.4
occ:1.00
OH C:TYR188 1.8 18.2 1.0
OH C:TYR95 2.0 20.6 1.0
O2 C:CO3338 2.0 10.5 0.3
OD1 C:ASP63 2.0 19.1 1.0
NE2 C:HIS249 2.0 22.0 1.0
O1 C:CO3338 2.1 13.4 0.7
O2 C:CO3338 2.2 28.7 0.7
O1 C:CO3338 2.4 20.1 0.3
C C:CO3338 2.5 19.4 0.7
C C:CO3338 2.5 19.9 0.3
CZ C:TYR188 2.9 25.2 1.0
CE1 C:HIS249 2.9 21.4 1.0
CZ C:TYR95 3.1 27.2 1.0
CD2 C:HIS249 3.1 22.1 1.0
CG C:ASP63 3.2 21.6 1.0
CE2 C:TYR95 3.6 21.5 1.0
CE1 C:TYR188 3.7 21.8 1.0
CB C:ASP63 3.7 18.7 1.0
CE2 C:TYR188 3.8 22.8 1.0
O3 C:CO3338 3.8 15.8 0.3
O3 C:CO3338 3.8 8.9 0.7
ND1 C:HIS249 4.1 21.7 1.0
CE1 C:TYR95 4.1 25.3 1.0
OD2 C:ASP63 4.2 22.2 1.0
CG C:HIS249 4.2 21.6 1.0
NZ C:LYS296 4.3 23.7 1.0
NH2 C:ARG124 4.3 38.3 0.7
CA C:ASP63 4.5 17.7 1.0
CB C:SER125 4.7 19.0 1.0
NE C:ARG124 4.9 46.0 0.7
N C:ALA126 4.9 20.1 1.0
CD C:LYS296 4.9 24.9 1.0
CD2 C:TYR95 4.9 21.9 1.0
N C:SER125 5.0 19.6 1.0
CD1 C:TYR188 5.0 22.4 1.0
OG C:SER125 5.0 21.4 1.0

Iron binding site 2 out of 4 in 1suv

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Iron binding site 2 out of 4 in the Structure of Human Transferrin Receptor-Transferrin Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure of Human Transferrin Receptor-Transferrin Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Fe339

b:20.4
occ:1.00
OH D:TYR188 1.8 18.2 1.0
OH D:TYR95 2.0 20.6 1.0
O2 D:CO3338 2.0 10.5 0.3
OD1 D:ASP63 2.0 19.1 1.0
NE2 D:HIS249 2.0 22.0 1.0
O1 D:CO3338 2.1 13.4 0.7
O2 D:CO3338 2.2 28.7 0.7
O1 D:CO3338 2.4 20.1 0.3
C D:CO3338 2.5 19.4 0.7
C D:CO3338 2.5 19.9 0.3
CZ D:TYR188 2.9 25.2 1.0
CE1 D:HIS249 2.9 21.4 1.0
CZ D:TYR95 3.1 27.2 1.0
CD2 D:HIS249 3.1 22.1 1.0
CG D:ASP63 3.2 21.6 1.0
CE2 D:TYR95 3.6 21.5 1.0
CE1 D:TYR188 3.7 21.8 1.0
CB D:ASP63 3.7 18.7 1.0
CE2 D:TYR188 3.8 22.8 1.0
O3 D:CO3338 3.8 15.8 0.3
O3 D:CO3338 3.8 8.9 0.7
ND1 D:HIS249 4.1 21.7 1.0
CE1 D:TYR95 4.1 25.3 1.0
OD2 D:ASP63 4.2 22.2 1.0
CG D:HIS249 4.2 21.6 1.0
NZ D:LYS296 4.3 23.7 1.0
NH2 D:ARG124 4.3 38.3 0.7
CA D:ASP63 4.5 17.7 1.0
CB D:SER125 4.7 19.0 1.0
NE D:ARG124 4.9 46.0 0.7
N D:ALA126 4.9 20.1 1.0
CD D:LYS296 4.9 24.9 1.0
CD2 D:TYR95 4.9 21.9 1.0
N D:SER125 5.0 19.6 1.0
CD1 D:TYR188 5.0 22.4 1.0
OG D:SER125 5.0 21.4 1.0

Iron binding site 3 out of 4 in 1suv

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Iron binding site 3 out of 4 in the Structure of Human Transferrin Receptor-Transferrin Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Structure of Human Transferrin Receptor-Transferrin Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Fe703

b:32.8
occ:1.00
OH E:TYR425 1.7 25.4 1.0
OH E:TYR514 1.9 39.6 1.0
O1 E:CO3701 1.9 26.0 1.0
NE2 E:HIS582 2.1 27.8 1.0
O3 E:CO3701 2.2 27.5 1.0
C E:CO3701 2.3 28.3 1.0
OD1 E:ASP392 2.4 46.0 1.0
CZ E:TYR425 2.8 32.0 1.0
CZ E:TYR514 3.0 33.5 1.0
CE1 E:HIS582 3.0 27.7 1.0
CG E:ASP392 3.1 37.2 1.0
CD2 E:HIS582 3.2 27.9 1.0
CE2 E:TYR425 3.5 36.0 1.0
O2 E:CO3701 3.6 28.8 1.0
CE1 E:TYR514 3.6 33.1 1.0
CB E:ASP392 3.7 36.1 1.0
CE1 E:TYR425 3.9 32.9 1.0
OD2 E:ASP392 3.9 38.0 1.0
CE2 E:TYR514 3.9 32.6 1.0
ND1 E:HIS582 4.1 23.4 1.0
NH1 E:ARG629 4.2 40.6 1.0
CG E:HIS582 4.3 29.3 1.0
CA E:ASP392 4.5 36.9 1.0
NH2 E:ARG455 4.6 37.2 1.0
CB E:THR456 4.6 35.1 1.0
OG1 E:THR456 4.6 35.4 1.0
N E:ALA457 4.8 37.4 1.0
CD2 E:TYR425 4.8 38.2 1.0
N E:THR456 4.8 33.7 1.0
NE E:ARG455 4.8 38.1 1.0
CD1 E:TYR514 4.9 32.5 1.0

Iron binding site 4 out of 4 in 1suv

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Iron binding site 4 out of 4 in the Structure of Human Transferrin Receptor-Transferrin Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Structure of Human Transferrin Receptor-Transferrin Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Fe703

b:32.8
occ:1.00
OH F:TYR425 1.7 25.4 1.0
OH F:TYR514 1.9 39.6 1.0
O1 F:CO3701 1.9 26.0 1.0
NE2 F:HIS582 2.1 27.8 1.0
O3 F:CO3701 2.2 27.5 1.0
C F:CO3701 2.3 28.3 1.0
OD1 F:ASP392 2.4 46.0 1.0
CZ F:TYR425 2.8 32.0 1.0
CZ F:TYR514 3.0 33.5 1.0
CE1 F:HIS582 3.0 27.7 1.0
CG F:ASP392 3.1 37.2 1.0
CD2 F:HIS582 3.2 27.9 1.0
CE2 F:TYR425 3.5 36.0 1.0
O2 F:CO3701 3.6 28.8 1.0
CE1 F:TYR514 3.6 33.1 1.0
CB F:ASP392 3.7 36.1 1.0
CE1 F:TYR425 3.9 32.9 1.0
OD2 F:ASP392 3.9 38.0 1.0
CE2 F:TYR514 3.9 32.6 1.0
ND1 F:HIS582 4.1 23.4 1.0
NH1 F:ARG629 4.2 40.6 1.0
CG F:HIS582 4.3 29.3 1.0
CA F:ASP392 4.5 36.9 1.0
NH2 F:ARG455 4.6 37.2 1.0
CB F:THR456 4.6 35.1 1.0
OG1 F:THR456 4.6 35.4 1.0
N F:ALA457 4.8 37.4 1.0
CD2 F:TYR425 4.8 38.2 1.0
N F:THR456 4.8 33.7 1.0
NE F:ARG455 4.8 38.1 1.0
CD1 F:TYR514 4.9 32.5 1.0

Reference:

Y.Cheng, O.Zak, P.Aisen, S.C.Harrison, T.Walz. Structure of the Human Transferrin Receptor-Transferrin Complex Cell(Cambridge,Mass.) V. 116 565 2004.
ISSN: ISSN 0092-8674
PubMed: 14980223
DOI: 10.1016/S0092-8674(04)00130-8
Page generated: Sat Aug 3 15:03:16 2024

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