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Iron in PDB 1yeb: Structure Determination and Analysis of Yeast Iso-2-Cytochrome C and A Composite Mutant Protein

Protein crystallography data

The structure of Structure Determination and Analysis of Yeast Iso-2-Cytochrome C and A Composite Mutant Protein, PDB code: 1yeb was solved by M.E.P.Murphy, G.D.Brayer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 6.00 / 1.95
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 36.390, 36.390, 137.280, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Iron Binding Sites:

The binding sites of Iron atom in the Structure Determination and Analysis of Yeast Iso-2-Cytochrome C and A Composite Mutant Protein (pdb code 1yeb). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Structure Determination and Analysis of Yeast Iso-2-Cytochrome C and A Composite Mutant Protein, PDB code: 1yeb:

Iron binding site 1 out of 1 in 1yeb

Go back to Iron Binding Sites List in 1yeb
Iron binding site 1 out of 1 in the Structure Determination and Analysis of Yeast Iso-2-Cytochrome C and A Composite Mutant Protein


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure Determination and Analysis of Yeast Iso-2-Cytochrome C and A Composite Mutant Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe104

b:6.6
occ:1.00
FE A:HEM104 0.0 6.6 1.0
ND A:HEM104 2.0 5.7 1.0
NA A:HEM104 2.0 4.7 1.0
NC A:HEM104 2.0 6.1 1.0
NB A:HEM104 2.0 5.4 1.0
NE2 A:HIS18 2.1 6.1 1.0
SD A:MET80 2.3 6.9 1.0
CE1 A:HIS18 3.0 2.1 1.0
C4A A:HEM104 3.0 5.1 1.0
C1A A:HEM104 3.0 6.5 1.0
C4D A:HEM104 3.0 6.8 1.0
C1B A:HEM104 3.0 6.6 1.0
C4C A:HEM104 3.1 7.4 1.0
C4B A:HEM104 3.1 6.2 1.0
C1C A:HEM104 3.1 7.3 1.0
C1D A:HEM104 3.1 5.3 1.0
CD2 A:HIS18 3.1 6.2 1.0
CE A:MET80 3.2 5.4 1.0
CG A:MET80 3.2 4.8 1.0
CHA A:HEM104 3.3 7.6 1.0
CHB A:HEM104 3.4 6.5 1.0
CHD A:HEM104 3.5 5.6 1.0
CHC A:HEM104 3.5 6.5 1.0
CB A:MET80 4.1 2.2 1.0
ND1 A:HIS18 4.2 4.2 1.0
C2A A:HEM104 4.2 6.3 1.0
C3A A:HEM104 4.2 5.2 1.0
C3D A:HEM104 4.3 6.1 1.0
C2D A:HEM104 4.3 6.5 1.0
CG A:HIS18 4.3 2.5 1.0
C2C A:HEM104 4.3 7.8 1.0
C3C A:HEM104 4.3 7.6 1.0
C2B A:HEM104 4.3 7.2 1.0
C3B A:HEM104 4.3 7.5 1.0

Reference:

M.E.Murphy, B.T.Nall, G.D.Brayer. Structure Determination and Analysis of Yeast Iso-2-Cytochrome C and A Composite Mutant Protein. J.Mol.Biol. V. 227 160 1992.
ISSN: ISSN 0022-2836
PubMed: 1326054
DOI: 10.1016/0022-2836(92)90689-H
Page generated: Sat Aug 3 17:37:58 2024

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